1 |
Connon, S. A. and S. J. Giovannoni. 2002. High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates. Appl. Environ. Microbiol. 68: 3878-3885
DOI
ScienceOn
|
2 |
DeLong, E. F., C. M. Preston, T. Mincer, V. Rich, S. J. Hallam, N. U. Frigaard, A. Martinez, M. B. Sullivan, R. Edwards, B. R. Brito, S. W. Chisholm, and D. M. Karl. 2006. Community genomics among stratified microbial assemblages in the ocean's interior. Science 311: 496-503
DOI
|
3 |
Hwang, C. Y. and B. C. Cho. 2006. Flectobacillus lacus sp. nov., isolated from a highly eutrophic pond in Korea. Int. J. Syst. Evol. Microbiol. 56: 1197-1201
DOI
ScienceOn
|
4 |
Kim, B. S., H. M. Oh, H. J. Kang, S. S. Park, and J. S. Chun. 2004. Remarkable bacterial diversity in the tidal flat sediment as revealed by 16S rDNA analysis. J. Microbiol. Biotechnol. 14: 205-211
|
5 |
Kim, M.-S., J.-H. Ahn, M.-K. Jung, J.-H. Yu, D.-H. Joo, M.-C. Kim, H.-C. Shin, T. Kim, T.-H. Ryu, S.-J. Kweon, T. Kim, D.-H. Kim, and J.-O. Ka. 2005. Molecular and cultivation-based characterization of bacterial community structure in rice field soil. J. Microbiol. Biotechnol. 15: 1087-1093
과학기술학회마을
|
6 |
Ludwig, W., O. Strunk, R. Westram, L. Richter, H. Meier, Yadhukumar, A. Buchner, T. Lai, S. Steppi, G. Jobb, W. Forster, I. Brettske, S. Gerber, A. W. Ginhart, O. Gross, S. Grumann, S. Hermann, R. Jost, A. Konig, T. Liss, R. Lussmann, M. May, B. Nonhoff, B. Reichel, R. Strehlow, A. Stamatakis, N. Stuckmann, A. Vilbig, M. Lenke, T. Ludwig, A. Bode, and K. H. Schleifer. 2004. ARB: A software environment for sequence data. Nucleic Acids Res. 32: 1363-1371
DOI
|
7 |
Rappe, M. S., S. A. Connon, K. L. Vergin, and S. J. Giovannoni. 2002. Cultivation of the ubiquitous SAR11 marine bacterioplankton clade. Nature 418: 630-633
DOI
ScienceOn
|
8 |
Stackebrandt, E. and B. M. Goebel. 1994. Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int. J. Syst. Bacteriol. 44: 846-849
DOI
ScienceOn
|
9 |
Bruns, A., H. Hoffelner, and J. Overmann. 2003. A novel approach for high throughput cultivation assays and the isolation of planktonic bacteria. FEMS Microbiol. Ecol. 45: 161-171
DOI
ScienceOn
|
10 |
Zwart, G., W. D. Hiorns, B. A. Methe, M. P. van Agterveld, R. Huismans, S. C. Nold, J. P. Zehr, and H. J. Laanbroek. 1998. Nearly identical 16S rRNA sequences recovered from lakes in North America and Europe indicate the existence of clades of globally distributed freshwater bacteria. Syst. Appl. Microbiol. 21: 546-55
DOI
ScienceOn
|
11 |
Lee, S.-H., H.-R. Oh, J.-H. Lee, S.-J. Kim, and J.-C. Cho. 2004. Cold-seep sediment harbors phylogenetically diverse uncultured bacteria. J. Microbiol. Biotechnol. 14: 906-913
|
12 |
Page, K. A., S. A. Connon, and S. J. Giovannoni. 2004. Representative freshwater bacterioplankton isolated from Crater Lake, Oregon. Appl. Environ. Microbiol. 70: 6542- 6550
DOI
ScienceOn
|
13 |
Thompson, J. R., M. A. Randa, L. A. Marcelino, A. Tomita- Mitchell, E. Lim, and M. F. Polz. 2004. Diversity and dynamics of a north atlantic coastal Vibrio community. Appl. Environ. Microbiol. 70: 4103-4110
DOI
ScienceOn
|
14 |
Wang, Z.-W., Y.-H. Liu, X. Dai, B.-J. Wang, C.-Y. Jiang, and S.-J. Liu. 2006. Flavobacterium saliperosum sp. nov., isolated from freshwater lake sediment. Int. J. Syst. Evol. Microbiol. 56: 439-442
DOI
ScienceOn
|
15 |
Gich, F., K. Schubert, A. Bruns, H. Hoffelner, and J. Overmann. 2005. Specific detection, isolation, and characterization of selected, previously uncultured members of the freshwater bacterioplankton community. Appl. Environ. Microbiol. 71: 5908-5919
DOI
ScienceOn
|
16 |
Cho, J.-C. and S. J. Giovannoni. 2004. Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria. Appl. Environ. Microbiol. 70: 432-440
DOI
ScienceOn
|
17 |
Kim, W.-K., R. Cui, and D. Jahng. 2005. Enrichment of ammonia-oxidizing bacteria for efficient nitrification of wastewater. J. Microbiol. Biotechnol. 15: 772-779
과학기술학회마을
|
18 |
Gich, F. and J. Overmann. 2006. Sandarakinorhabdus limnophila gen. nov., sp. nov., a novel bacteriochlorophyll a-containing, obligately aerobic bacterium isolated from freshwater lakes. Int. J. Syst. Evol. Microbiol. 56: 847-854
DOI
ScienceOn
|
19 |
Konneke, M., A. E. Bernhard, J. R. de la Torre, C. B. Walker, J. B. Waterbury, and D. A. Stahl. 2005. Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 437: 543-546
DOI
ScienceOn
|
20 |
Acinas, S. G., V. Klepac-Ceraj, D. E. Hunt, C. Pharino, I. Ceraj, D. L. Distel, and M. F. Polz. 2004. Fine-scale phylogenetic architecture of a complex bacterial community. Nature 430: 551-554
DOI
ScienceOn
|
21 |
Reasoner, D. J. and E. E. Geldreich. 1985. A new medium for the enumeration and subculture of bacteria from potable water. Appl. Environ. Microbiol. 49: 1-7
|
22 |
Ahn, J.-H., M.-S. Kim, M.-C. Kim, J.-S. Lim, G.-T. Lee, J. K. Yun, T. Kim, T. Kim, and J.-O. Ka. 2006. Analysis of bacterial diversity and community structure in forest soils contaminated with fuel hydrocarbon. J. Microbiol. Biotechnol. 16: 704-715
과학기술학회마을
|
23 |
Gich, F., J. Garcia-Gil, and J. Overmann. 2001. Previously unknown and phylogenetically diverse members of the green nonsulfur bacteria are indigenous to freshwater lakes. Arch. Microbiol. 177: 1-10
DOI
ScienceOn
|
24 |
Swofford, D. 2002. PAUP. Phylogenetic Analysis Using Parsimony (and Other Methods). 4b8 Ed. Sinauer Associates, Sunderland, Massachusetts
|
25 |
Wayne, L. G., D. J. Brenner, R. R. Colwell, P. A. D. Grimont, O. Kandler, M. I. Krichevsky, L. H. Moore, W. E. C. Moore, R. G. E. Murray, E. Stackebrandt, M. P. Starr, and H. G. Trufer. 1987. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int. J. Syst. Bacteriol. 37: 463-464
DOI
|
26 |
Xiang, Z., X. Xiao, P. Wang, and F. P. Wang. 2004. Screening and characterization of psychrotrophic, lipolytic bacteria from deep-sea sediments. J. Microbiol. Biotechnol. 14: 952-958
|
27 |
Giovannoni, S. and M. Rappe. 2000. Evolution, diversity and molecular ecology of marine prokaryotes, pp. 47-84. In D. L. Kirchman (ed.), Microbial Ecology of the Oceans. John Wiley & Sons, Inc., New York
|
28 |
Cohan, F. M. 2002. What are bacterial species? Annu. Rev. Microbiol. 56: 457-487
DOI
ScienceOn
|
29 |
Tamaki, H., Y. Sekiguchi, S. Hanada, K. Nakamura, N. Nomura, M. Matsumura, and Y. Kamagata. 2005. Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques. Appl. Environ. Microbiol. 71: 2162-2169
DOI
ScienceOn
|
30 |
Zwart, G., R. Huismans, M. P. van Agterveld, Y. Van de Peer, P. De Rijk, H. Eenhoorn, G. Muyzer, E. J. van Hannen, H. J. Gons, and H. J. Laanbroek. 1998. Divergent members of the bacterial division Verrucomicrobiales in a temperate freshwater lake. FEMS Microbiol. Ecol. 25: 159-169
DOI
|
31 |
Rocap, G., F. W. Larimer, J. Lamerdin, S. Malfatti, P. Chain, N. A. Ahlgren, A. Arellano, M. Coleman, L. Hauser, W. R. Hess, Z. I. Johnson, M. Land, D. Lindell, A. F. Post, W. Regala, M. Shah, S. L. Shaw, C. Steglich, M. B. Sullivan, C. S. Ting, A. Tolonen, E. A. Webb, E. R. Zinser, and S. W. Chisholm. 2003. Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation. Nature 424: 1042-1047
DOI
ScienceOn
|
32 |
Simu, K. and A. Hagstrom. 2004. Oligotrophic bacterioplankton with a novel single-cell life strategy. Appl. Environ. Microbiol. 70: 2445-2451
DOI
ScienceOn
|
33 |
Cho, W., E.-H. Lee, E.-H. Shim, J. Kim, H. W. Ryu, and K.-S. Cho. 2005. Bacterial communities of biofilms sampled from seepage groundwater contaminated with petroleum oil. J. Microbiol. Biotechnol. 15: 952-964
과학기술학회마을
|
34 |
Hugenholtz, P., C. Pitulle, K. Hershberger, and N. R. Pace. 1998. Novel division level bacterial diversity in a Yellowstone hot spring. J. Bacteriol. 180: 366-376
|
35 |
Moore, L. R., G. Rocap, and S. W. Chisholm. 1998. Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes. Nature 393: 464-467
DOI
ScienceOn
|
36 |
Hugenholtz, P., B. M. Goebel, and N. R. Pace. 1998. Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. J. Bacteriol. 180: 4765-4774
|