Characterization of the Catabolite Control Protein (CcpA) Gene from Leuconostoc mesenteroides SY1 |
PARK JAE-YONG
(Division of Applied Life Science, Graduate School, and Gyeongsang National University)
PARK JIN-SIK (Division of Applied Life Science, Graduate School, and Gyeongsang National University) KIM JONG-HWAN (Division of Applied Life Science, Graduate School, and Gyeongsang National University) JEONG SEON-JU (Division of Applied Life Science, Graduate School, and Gyeongsang National University) CHUN JIYEON (Division of Applied Life Science, Graduate School, and Gyeongsang National University) LEE JONG-HOON (Department of Foods and Biotechnology, Kyunggi University) KIM JEONG HWAN (Institute of Agriculture & Life Science, Gyeongsang National University) |
1 | Gill, S. C. and P. H. von Hippel 1989. Calculation of protein extinction coefficients from amino acid sequence data. Anal. Biochem. 182: 319-326 DOI ScienceOn |
2 | Grundy, F. J., D. A. Waters, T. Y. Takova, and T. M. Henkin. 1993. Identification of genes involved in utilization of acetate and acetoin in Bacillus subtilis. Mol. Microbiol. 10: 259-271 DOI ScienceOn |
3 | Hall, T. A. 1999. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/ NT. Nucl. Acids Symp. Ser. 41: 95-98 |
4 | Henkin, T. M., F. J. Grundy, W. L. Nicholson, and G H. Chambliss. 1991. Catabolite repression of a-amylase gene expression in Bacillus subtilis involves a trans-acting gene product homologous to the Escherichia coli lacl and galR repressors. Mol. Microbiol. 5: 575-584 DOI ScienceOn |
5 | Nam, S. J., J. Y. Park, J. K. Kim, Y. L. Hae, H. D. Yun, and J. H. Kim. 2004. Cloning of pdh genes encoding subunits of pyruvate dehydrogenase complex from Lactobacillus reuteri ATCC 55739. J. Microbiol. Biotechnol. 14: 197-201 |
6 | Reizer, J., C. Hoischen, F. Titgemeyer, C. Rivolta, R. Rabus, J. Stlilke, D. Karamata, M. H. Saier, Jr., and W. Hillen. 1998. A novel protein kinase that controls carbon catabolite repression in bacteria. Mol. Microbiol. 27: 1157-1169 DOI ScienceOn |
7 | Ryu, J. Y., H. S. Lee, and H. S. Rhee. 1984. Changes of organic acids and volatile flavor compounds in kimchi fermented with different ingredients. Kor. J. Food Sci. Technol. 16: 169-173 |
8 | Kravanja, M., R. Engelmann, V. Dossonnet, M. Bluggel, H. E. Meyer, R. Frank, A. Galinier, J. Deutscher, N. Schnell, and W. Hengstenberg. 1999. The hprK gene of Enterococcus faecalis encodes a novel bifunctional enzyme: The HPr kinase/phosphatase. Mol. Microbiol. 31: 59-66 DOI ScienceOn |
9 | Galinier, A., J. Haiech, M.-C. Kilhofer, M. Jaquinod, J. Sti.ilke, J. Deutscher, and J. Martin-Verstraete. 1997. The Bacillus subtilis crh gene encodes an HPr-like protein involved in carbon catabolite repression. Proc. Natl. Acad. Sci. USA 94: 8439-8444 |
10 | Inacio, J. M., C. Costa, and I. de Sa-Nogueira. 2003. Distinct molecular mechanisms involved in carbon catabolite repression of the arabinose regulon in Bacillus subtilis. Microbiology 149: 2345-2355 DOI ScienceOn |
11 | Han, H. U., C. R. Lim, and H. K. Park. 1990. Determination of microbial community as an indicator ofkimchi fermentation. Kor. J. Food Sci. Technol. 22: 26-32 |
12 | Renna, M. C., N. Najimudin, L. R. Winik, and S. A. Zahler. 1993. Regulation of the Bacillus subtilis alsS, alsD, and alsR genes involved in post-exponential-phase production of acetoin. J. Bacteriol. 175: 3863 - 3875 DOI |
13 | Egeter, O. and Y. Miwa. 1994. Catabolite repression mediated by the catabolite control protein CcpA protein. J. Bacterial. 176: 511-513 DOI |
14 | Koster, E., T. Hilbich, M. K. Dahl, and W. Hillen. 1999. Mutations in catabolite control protein CcpA separating growth effects from catabolite repression. J. Bacterial. 181: 4125-4128 |
15 | Park, J. Y., S. J. Park, S. J. Nam, Y. L. Ha, and J. H. Kim. 2002. Cloning and characterization of the L-Iactate dehydrogenase gene (ldhL) from Lactobacillus reuteri ATCC 55739. J. Microbiol. Biotechnol. 12: 716-721 |
16 | Zhang, J. and T. L Madden. 1997. PowerBLAST: A new network BLAST application for interactive or automated sequence analysis and annotation. Genome Res. 7: 649-656 DOI |
17 | Chyun, J. H. and H. S. Rhee. 1976. Studies on the volatile fatty acids and carbon dioxide produced in different kimchis. Kor. J. Food Sci. Technol. 8: 90-94 |
18 | Park, R.-J., K.-H. Lee, S.-J. Kim, J.-Y. Park, S.-J. Nam, H.-D. Yun, H.-J. Lee, H. C. Chang, D. K. Chung, J.-H. Lee, Y H. Park, and J. H. Kim. 2002. Isolation of Lactococcus lactis strain with -galactosidase activity from kimchi and cloning of lacZ gene from the isolated strain. J. Microbiol. Biotechnol. 12: 157-161 |
19 | Fujita, Y., Y. Miwa, A. Galinier, and J. Deutscher. 1995. Specific recognition of the Bacillus subtilis gnt cis-acting catabolite-responsive element by a protein complex formed between CcpA and seryl-phosphorylated HPr. Mol. Microbial. 17: 953-960 DOI ScienceOn |
20 | Monedero, V., M. J. Gosalbes, and G. Perez-Martinez. 1997. Catabolite repression in Lactobacillus casei ATCC 393 is mediated by CopA. J. Bacteriol. 179: 6657-6664 DOI |
21 | Stlilke, J. and W. Hillen. 1999. Carbon catabolite repression in bacteria. Curr. Opin. Microbiol. 2: 195-201 DOI ScienceOn |
22 | Deutscher, J., E. KUster, U. Bergstedt, V. Charrier, and W. Hillen. 1995. Protein kinase-dependent HPr/CcpA interaction links glycolytic activity to carbon catabolite repression in gram-positive bacteria. Mol. Microbial. 15: 1049-1053 DOI ScienceOn |
23 | Jeong, S. J., D. J. You, H. J. Kwon, S. Kanaya, N. Kunihiro, K. H. Kim, Y. H. Kim, and B. W. Kim. 2002. Cloning and characterization of cycloinulooligosaccharide fiuctanotransferase . (CFTase) from Bacillus polymyxa MGL21. J. Microbiol. Biotechnol. 12: 921-928 |
24 | Lee, K. H., G. S. Moon, J. Y. An, H. J. Lee, H. C. Cahng, D. K. Chung, J. H. Lee, and J. H. Kim. 2002. Isolation of a nisin-producing Lactococcus lactis strain from kimchi and characteriaztion of its nisZ gene. J. Microbiol. Biotechnol. 12: 389-397 |
25 | Mahr, K., W. Hillen, and F. Titgemeyer. 2000. Carbon catabolite repression in Lactobacillus pentosus: Analysis of the ccpA region. Appl. Environ. Microbiol. 66: 277-283 DOI ScienceOn |
26 | Gosseringer, R., E. KUster, A. Galinier, J. Deutscher, and W. Hillen. 1997. Cooperative and non-cooperative DNA binding modes of catabolite control protein CcpA from Bacillus megaterium result from sensing two different signals. J. Mol. Biol. 266: 665-676 DOI ScienceOn |
27 | Hueck, C. J. and W. Hillen. 1995. Catabolite repression in Bacillus subilis: A global regulatory mechanism for the gram-positive bacteria. Mol. Microbiol. 15: 395-401 DOI ScienceOn |
28 | Shin, B. S., S. K. Choi, and S. H. Park. 1999. Regulation of the Bacillus subtilis phosphotransacetylase gene. J. Biochem. (Tokyo) 126: 333-339 DOI |
29 | Faires, N., S. Tobisch, S. Bachem, J. Martin-Verstraete, M. Hecker, and J. Sti.ilke. 1999. The catabolite control protein CcpA controls ammonium assimilation in Bacillus subtilis. J. Mol. Microbial. Biotechnol. 1: 141-148 |
30 | Luesink, E. J., R. E. van Herpen, B. P. Grossiord, O. P. Kuipers, and W. M. de Vos. 1998. Transcriptional activation of the glycolytic las operon and catabolite repression of the gal operon in Lactococcus lactis are mediated by the catabolite control protein CcpA. Mol. Microbiol. 30: 789-798 DOI ScienceOn |
31 | Higgins D., J. Thompson, T. Gibson, J. D. Thompson, D. G Higgins, and T. J. Gibson. 1994. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680 DOI ScienceOn |
32 | Muscariello, L., R. Marasco, M. de Felice, and M. Sacco. 2001 The functional ccpA gene is required for carbon catabolite repression in Lactobacillus plantarum. Appl. Environ. Microbiol. 67: 2903-2907 DOI ScienceOn |