Browse > Article

Optimization of Culture Conditions for D-Ribose Production by Transketolase-Deficient Bacillus subtilis JY1  

Park, Yong-Cheol (Department of Biochemistry and Cell Biology, Rice University)
Seo, Jin-Ho (Interdisciplinary Program for Biochemical Engineering and Biotechnology, Seoul National University)
Publication Information
Journal of Microbiology and Biotechnology / v.14, no.4, 2004 , pp. 665-672 More about this Journal
Abstract
D-Ribose is a five-carbon sugar used for the commercial synthesis of riboflavin, antiviral agents, and flavor enhancers. Batch fermentations with transketolase-deficient B. subtilis JY1 were carried out to optimize the production of D-ribose from xylose. The best results for the fermentation were obtained with a temperature of $37^{\circ}C$ and an initial pH of 7.0. Among various sugars and sugar alcohols tested, glucose and sucrose were found to be the most effective for both cell growth and D-ribose production. The addition of 15 g/l xylose and 15 g/l glucose improved the fermentation performance, presumably due to the adequate supply of ATP in the xylose metabolism from D-xylulose to D-xylulose-5-phosphate. A batch culture in a 3.7-1 jar fermentor with 14.9 g/l xylose and 13.1 g/l glucose resulted in 10.1 g/l D-ribose concentration with a yield of 0.62 g D-ribose/g sugar consumed, and 0.25 g/l-h of productivity. Furthermore, the sugar utilization profile, indicating the simultaneous consumption of xylose and glucose, and respiratory parameters for the glucose and sucrose media suggested that the transketolase-deficient B. subtilis JY1 lost the glucose-specific enzyme II of the phosphoenolpyruvate transferase system.
Keywords
D-Ribose; xylose; Bacillus subtilis; transketolase; batch fermentation;
Citations & Related Records
Times Cited By KSCI : 1  (Citation Analysis)
Times Cited By Web Of Science : 5  (Related Records In Web of Science)
연도 인용수 순위
1 Transport mechanisms /
[ Saier, Jr. M. H.;M. J. Fagan;C. Hoischen;J. Reizer ] / Bacillus subtilis and Other Gram-Positive Bacteria
2 Carbohydrate metabolismmutants of a Bacillus species. Part Ⅱ. <TEX>$_D$</TEX>-Ribose accumulation by pentose phosphate pathway mutant /
[ Sasajima, K.;M. Yoneda ] / Agr. Biol. Chem.   DOI
3 TKL2, a second transketolse gene of Saccharomyces cerevisiae. Cloning, sequence and deletion analysis of the gene /
[ Schaaff-Gerstenschlager, I.;G. Mannhaupt;I. Vetter;F. K. Zimmermann ] / Eur. J. Biochem.   DOI   ScienceOn
4 Contribution of XyIR, CcpA and cre to diauxic growth of Bacillus megaterium and to xylose isomerase expression in the presence of glucose and xylose /
[ Schmiedel, D.;W. Hillen ] / Mol. Gen. Genet.
5 A biological method for producing <TEX>$_D-$</TEX>ribose from <TEX>$_D-$</TEX>xylose using a Bacillus subtilis mutant /
[ Seo, J. H.;Y. C. Park;S. Y. Kim;J. K. Lee;S. J. Ha;S. K. Kim ] / Korea Patent. Filed No. 10-2002-057580.
6 Application of a compatible xylose isomerase in simultaneous bioconversion of glucose and xylose to ethanol /
[ Chandrakant, P.;V. S. Bisaria ] / Biotechnol. Bioprocess Eng.   DOI
7 Production of xylitol in cell recycle fermentations of Candida tropicalis /
[ Choi, J. H.;K. H. Moon;Y. W. Ryu;J. H. Seo ] / Biotechnol. Lett.   DOI   ScienceOn
8 Loss of protein kinase-catalyzed phosphorylation of HPr, a phosphocarrier protein of the phosphotransferase system, by mutation of the ptsH gene confers catabolite repression resistance to several catabolic genes of Bacillus subtilis /
[ Deutscher, J.;J. Reizer;C. Fischer;A. Galinier;M. H. Saier, Jr.;M. Steinmetz ] / J. Bacteriol.   DOI
9 <TEX>$_D-$</TEX>Glucose does not catabolite repress a transketolasedeficient <TEX>$_D-$</TEX>ribose-producing Bacillus subtilis mutant strain /
[ De Wulf, P.;W. Soetaert;D. Schwengers;E. J. Vandamme ] / J. Ind. Microbiol.   DOI   ScienceOn
10 /
[ Atkins, P. W. ] / Physical Chemistry(6th Ed.)
11 Lipopolysaccharide and aldoheptose biosynthesis in transketolase mutants of Salmonella typhimurium /
[ Eidels, L.;M. J. Osborn ] / Proc. Nat. Acad. Sci. USA   DOI   ScienceOn
12 Specific organic acids enhance the <TEX>$_D-$</TEX>ribose productivity of a transketolase-defective Bacillus subtilis strain /
[ De Wulf, P.;W. Soetaert;D. Schwengers;E. J. Vandamme ] / J. Chem. Technol. Biotechnol.   DOI   ScienceOn
13 Production of <TEX>$_D-$</TEX>ribose /
[ De Wulf, P.;E. J. Vandamme ] / Appl. Microbiol. Biotechnol.   DOI   ScienceOn
14 Optimization of <TEX>$_D-$</TEX>ribose production with a transketolaseaffected Bacillus subilis mutant strain in glucose and gluconic acid-base media /
[ De Wulf, P.;W. Soetaert;D. Schwengers;E. J. Vandamme ] / J. Appl. Microbiol.   DOI   ScienceOn
15 Carbon catabolite repression (CCR) of expression of the xylanaseA gene of Bacillus stearothermophilus No. 236 /
[ Ha, G. S.;I. D. Choi;Y. J. Choi ] / J. Microbiol. Biotechnol.
16 Characterization of sugar mixtures utilization by an Escherichia coli mutant devoid of the phosphotransferase system /
[ Hernandez-Montalvo, V.;F. Valle;F. Bolivar;G. Gosset ] / Appl. Microbiol. Biotechnol.   DOI   ScienceOn
17 A transketolase mutant of Corynebacterium glutamicum /
[ Ikeda, M.;K. Okamoto;R. Katsumata ] / Appl. Microbiol. Biotechnol.   DOI   ScienceOn
18 Catabolite repression of the operon for xylose utilization from Bacillus subtilis W23 is mediated at the level of transcription and depends on a cis site in the xylA reading frame /
[ Jacob, S.;R. Allmansberger;D. Gartner;W. Hillen ] / Mol. Gen. Genet.   DOI   ScienceOn
19 Conversion of xylose to ethanol by recombinant Saccharomyces cerevisiae containing genes for xylose reductase and xylitol dehydrogenase from Pichia stipitis /
[ Jin, Y. S.;T. H. Lee;Y. D. Choi;Y. W. Ryu;J. H. Seo ] / J. Microbiol. Biotechnol.
20 Transketolase mutants of Escherichia coli /
[ Josephson, B.;D. G. Frankel ] / J. Bacteriol.
21 Sugar metabolism in transketolase mutants of Escherichia coli /
[ Josephson, B.;D. G. Frankel ] / J. Bacteriol.
22 High-yield production of xylitol from xylose by a xylitol dehydrogenase defective mutant of Pichia stipitis /
[ Kim, M. S.;Y. S. Chung;J. H. Seo;D. H. Jo;Y. H. Park;Y. W. Ryu ] / J. Microbiol. Biotechnol.
23 Genetics and regulation of carbohydrate catabolism in Bacillus /
[ Klier, A. F.;G. Rapoport ] / Annu. Rev. Microbiol.   DOI   ScienceOn
24 Characterization of glucose-specific catabolite repressionresistant mutants of Bacillus subtilis: Identification of a novel hexose:H <TEX>$H^+$</TEX> symporter /
[ Paulsen, I. T.;S. Chauvaux;P. Choi;M. H. Saier, Jr. ] / J. Bacteriol.
25 A parametric study on ethanol production from xylose by Pichia stipitis /
[ Lee, T. Y.;M. D. Kim;K. Y. Kim;K. M. Park;Y. W. Ryu;J. H. Seo ] / Biotechnol. Bioprocess Eng.   DOI
26 Effects of xylose reductase activity on xylitol production in two-substrate fermentation of recombinant Saccharomyces cerevisiae /
[ Lee, W. J.;M. D. Kim;M. S. Kim;Y. W. Ryu;J. H. Seo ] / J. Microbiol. Biotechnol.
27 Effect of ribose on cardiac adenine nucleotides in a donor model for heart transplantation /
[ Muller, C.;H. G. Zimmer;M. Gross;U. Gresser;I. Brotsack;M. Wehling;W. Pliml ] / Eur. J. Med. Res.
28 Regulation of carbon catabolism in Bacillus species /
[ Stulke, J.;W. Hillen ] / Annu. Rev. Microbiol.   DOI   ScienceOn
29 Sugar uptake and carbon catabolite repression in Bacillus megaterium strains with inactivated ptsHI /
[ Wagner, A.;E. Kuster-Schock;W. Hillen ] / J. Mol. Microbiol. Biotechnol.
30 Influence of ribose on adenine salvage after intense muscle contractions /
[ Zarzeczny, R.;J. J. Brault,;K. A. Abraham;C. R. Hancock;R. L. Terjung ] / J. Appl. Physiol.   DOI
31 Normalization of depressed heart function in rats by ribose /
[ Zimmer, H. G. ] / Science   DOI