Phylogenetic Identification of Korean Gymnopus spp. and the First Report of 3 Species: G. iocephalus, G. polygrammus, and G. subnudus |
Jang, Seokyoon
(Division of Environmental Science & Ecological Engineering, College of Life Science & Biotechnology, Korea University)
Jang, Yeongseon (Division of Wood Chemistry & Microbiology, National Institute of Forest Science) Lim, Young Woon (School of Biological Sciences, Seoul National University) Kim, Changmu (Microorganism Resources Division, National Institute of Biological Resources) Ahn, Byoung Jun (Division of Wood Chemistry & Microbiology, National Institute of Forest Science) Lee, Sung-Suk (Division of Wood Chemistry & Microbiology, National Institute of Forest Science) Kim, Jae-Jin (Division of Environmental Science & Ecological Engineering, College of Life Science & Biotechnology, Korea University) |
1 | Antonin V, Sedlak P, Tomsovsky M. Taxonomy and phylogeny of European Gymnopus subsection Levipedes (Basidiomycota, Omphalotaceae). Persoonia 2013;31:179-87. DOI |
2 | Antonín V, Halling RE, Noordeloos ME. Generic concepts within the groups of Marasmius and Collybia sensu lato. Mycotaxon 1997;63:359-68. |
3 | Lee WS, Lim YW, Kim JJ, Yun HY, Kim C, Park JY; Korean Society of Mycology. National list of species of Korea: Basidiomycota. Incheon: National Institute of Biological Resources; 2015. |
4 | Antonin V, Ryoo R, Ka KH. Marasmioid and gymnopoid fungi of the Republic of Korea. 7. Gymnopus sect. Androsacei. Mycol Prog 2014;13:703-18. DOI |
5 | White TJ, Bruns TD, Lee S, Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR protocols: a guide to methods and applications. New York: Academic Press; 1990. p. 315-22. |
6 | Gardes M, Bruns TD. ITS primers with enhanced specificity for basidiomycetes: application to the identification of mycorrhizae and rusts. Mol Ecol 1993;2:113-8. DOI |
7 | Hong JH, Jang S, Heo YM, Min M, Lee H, Lee YM, Lee H, Kim JJ. Investigation of marine-derived fungal diversity and their exploitable biological activities. Mar Drugs 2015;13: 4137-55. DOI |
8 | Jang S, Jang Y, Kim JJ. New records of two agarics: Galerina sideroides and Gymnopus luxurians in South Korea. Kor J Mycol 2015;43:88-91. |
9 | Nylander JA. MrModeltest v2. Program distributed by the author. Uppsala: Evolutionary Biology Centre, Uppsala University; 2004. |
10 | Ronquist F, Huelsenbeck JP. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003;19:1572-4. DOI |
11 | Park WH, Lee JH. New wild fungi of Korea. Seoul: Kyohaksa; 2011. |
12 | Largent DL, Johnson D, Watling R. How to identify mushrooms to genus, III. Microscopic features. Eureka (CA): Mad River Press; 1977. |
13 | Munsell Color. Munsell soil color charts with genuine Munsell color chips. Grand Rapids (MI): Munsell Color; 2009. |
14 | Maddison DR, Maddison WP. MacClade 4: analysis of phylogeny and character evolution. Version 4.08. Sunderland (MA): Sinauer Associates; 2005. |
15 | Seok SJ, Lim YW, Kim CM, Ka KH, Lee JS, Han SK, Kim SO, Hur JS, Hyun IH, Hong SG et al. List of List of mushrooms in Korea. Seoul: Korean Society of Mycology; 2013. |
16 | Roy Halling's Collybia site [Internet]. New York: New York Botanical Garden; 2004 [cited 2016 Apr 30]. Available from: http://www.nybg.org/bsci/res/col/vestiped. html. |
17 | Dennis RW. Some Agaricaceae of Trinidad and Venezuela. Leucosporae: Part 1. Trans Br Mycol Soc 1951;34:411-82. DOI |
18 | Katoh K, Standley DM. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 2013;30:772-80. DOI |