Vegetative Growth and Phylogenetic Relationship of Commercially Cultivated Strains of Pleurotus eryngii based on ITS sequence and RAPD |
Alam, Nuhu
(Department of Biology, University of Incheon)
Shim, Mi-Ja (Department of Life Science, University of Seoul) Lee, Min-Woong (Department of Biology, Dongguk University) Shin, Pyung-Gyun (Mushroom Research Division, Department of Herbal Crop Research, National Institute of Horticulture & Herbal Science, RDA) Yoo, Young-Bok (Mushroom Research Division, Department of Herbal Crop Research, National Institute of Horticulture & Herbal Science, RDA) Lee, Tae-Soo (Department of Biology, University of Incheon) |
1 | Mayer, A. M. and Staples, R. C. 2002. Laccase: new functions for an old enzyme. Phytochemistry 60:551-565 DOI ScienceOn |
2 | Nei, M. and Li, W. H. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA 76:5269-5273 DOI ScienceOn |
3 | Ro, H. S., Kim, S. S., Ryu, J. S., Jeon, C. O., Lee, T. S. and Lee, H. S. 2007. Comparative studies on the diversity of the edible mushroom Pleurotus eryngii: ITS sequence analysis, RAPD fingerprinting and physiological characteristics. Myco. Res. 111:710-715 DOI ScienceOn |
4 | Soden, D. M. and Dobson, A. D. W. 2001. Differential regulation of laccase gene expression in Pleurotus sajor-caju. Microbiology 147:1755-1763 DOI |
5 | Sung, J. M., Kim, C. H., Yang, K. J., Lee, H. K. and Kim, Y. S. 1993. Studies on distribution and utilization of Cordyceps militaris and C. nutans. Kor. J. Mycol. 21:94-105 과학기술학회마을 |
6 | Zervakis, G. I., Venturella, G. and Papadopoulou, K. 2001. Genetic polymorphism and taxonomic infrastructure of the Pleurotus eryngii species-complex as determined by RAPD analysis, isozyme profiles and ecomorphological characters. Microbiology 147:3183-3194 DOI ScienceOn |
7 | Lewinsohn, D., Nevo, E., Wasser, S. P., Hadar, Y. and Beharav, A. 2001. Genetic diversity in populations of the Pleurotus eryngii complex in Israel. Myco. Res. 105:941-951 DOI ScienceOn |
8 | Lee, S. B. and Taylor, J. W. 1990. Isolation of DNA from fungal mycelia and single spores. In: PCR protocol: A Guide to Methods and Applications, pp. 282-287. Eds. M. A. Innis, D. H. Gelfand, J. J. Sninsky and T. J. White. Academic Press, San Diego |
9 | Alam, N., Jaysinghe, C., Cha, Y. J., Kim, J. H. and Lee, T. S. 2008. Screening of suitable conditions for mycelial growth of wild strains of Pholiota adiposa. Bull. Life & Environ. Sci. 2:105-112 |
10 | Cubero, O. F., Crespo, A., Fatehi, J. and Bridge, P. D. 1999. DNA extraction and PCR amplification method suitable for fresh, herbarium stored, lichenized and other fungi. Pant Syst. Evol. 216:243-249 DOI ScienceOn |
11 | Tuckwell, D. S., Nicholson, M. J., Mc-Sweeney, C. S., Theodorou, M. K. and Brookman, J. L. 2005. The rapid assignment of ruminal fungi to presumptive genera using ITS1 and ITS2 RNA secondary structures to produce group specific fingerprints. Microbiology 151:1557-1567 DOI ScienceOn |
12 | Watling, R. 1992. Observations on the Bolbitiaceae - 30. Some Brazilian taxa. Boletín de la Sociedad Argentina de Botánica. 28:77-103 |
13 | Saitou, N. and Nei, M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic tree. Mol. Biol. Evol. 4:406-425 |
14 | White, T. J., Bruns, T., Lee, S. and Taylor, J. W. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR Protocol: A Guide to Methods and Applications, pp. 315-322. Eds. M. A. Innis, D. H. Gelfand, J. J. Sninsky and T. J. White. Academic Press, SanDiego |
15 | Williams, J. G. K., Kubelik, A. R., Livak, K. J., Rafalski, J. A. and Tingey, S. V. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18:6531-6535 DOI ScienceOn |
16 | Alam, N., Shim, M. J., Lee, M. W., Shin, P. G., Yoo, Y. B. and Lee, T. S. 2009. Phylogenetic relationship in different commercial strains of Pleurotus nebrodensis based on ITS sequence and RAPD. Mycobiology 37:183-188 과학기술학회마을 DOI ScienceOn |
17 | Thompson, J. D., Higgins, D. G. and Gibson, T. J. 1994. Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighing position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680 DOI ScienceOn |
18 | Choi, D., Kang, S. H., Song, Y. H., Kwun, K. H., Jeong, K. J. and Cha, W. S. 2005. Exopolysaccharide production in liquid culture of Pleurotus ferulae. J. Microbiol. Biotecnol. 15:368-375 |
19 | Felsenstein, J. 1985. Confidence limit on phylogenies: an approach using the bootstrap. Evolution. 39:783-791 DOI ScienceOn |
20 | Hur, H. 2008. Cultural characteristics and log-mediated cultivation of the medicinal mushroom, Phellinus linteus. Mycobiology 36:81-87 과학기술학회마을 DOI ScienceOn |
21 | Shim, S. M., Oh, Y. H., Lee, K. R., Kim, S. H., Im, K. H., Kim, J. W., Lee, U. Y., Shim, J. O., Shim, M. J., Lee, M. W., Ro, H. S., Lee, H. S. and Lee, T. S. 2005. The characteristics of cultural conditions for the mycelial growth of Macrolepiota procera. Mycobiology 33:15-18 과학기술학회마을 DOI ScienceOn |
22 | Shim, J. O., Son, S. G., Kim, Y. H., Lee, Y. S., Lee, J. Y., Lee, T. S., Lee, S. S. and Lee, M. W. 1997. The cultural conditions affecting the mycelial growth of Grifola umbellata. Kor. J. Mycol. 25:209-218 과학기술학회마을 |
![]() |