Browse > Article

Isolation and Characterization of the Smallest Bacteriophage P4 Derivatives Packaged into P4-Size Head in Bacteriophage P2-P4 System  

Kim, Kyoung-Jin (Department of Life Science, College of Natural Sciences, Sunmoon University)
Song, Jae-Ho (Department of Life Science, College of Natural Sciences, Sunmoon University)
Publication Information
Journal of Microbiology / v.44, no.5, 2006 , pp. 530-536 More about this Journal
Abstract
Bacteriophage P4, a satellite phage of coliphage P2, is a very useful experimental tool for the study of viral capsid assembly and cos-cleavage. For an in vitro cos-cleavage reaction study of the P2-P4 system, new shortened and selectable markers containing P4 derivative plasm ids were designed as a substrate molecules. They were constructed by swapping the non-essential segment of P4 DNA for either the kanamycin resistance (kmr) gene or the ampicillin resistance (apr) gene. The size of the genomes of the resulting markers were 82% (P4 ash8 delRI:: kmr) and 79% (P4 ash8 delRI:: apr) of the wild type P4 genome. To determine the lower limit of genome size that could be packaged into the small P4-size bead, these shortened P4 plasmids were converted to phage particles with infection of the helper phage P2. The conversion of plasmid P4 derivatives to bacteriophage particles was verified by the heat stability test and the burst size determination experiment. CsCl buoyant equilibrium density gradient experiments confirmed not only the genome size of the viable phage form of shortened P4 derivatives, but also their packaging into the small P4-size head. P4 ash8 delRI:: apr turned out to be the smallest P4 genome that can be packaged into P4-sized head.
Keywords
bacteriophage P2-P4; Escherichia coli; cos-cleavage; packaging; P4-size head;
Citations & Related Records

Times Cited By Web Of Science : 2  (Related Records In Web of Science)
Times Cited By SCOPUS : 1
연도 인용수 순위
1 Bertani, L.E. and E.W. Six. 1988. The P2-like phages and their parasite, P4, vol. 2, p. 73-143. In R. Calendar (ed.), The Bacteriophages. Plenum Press, New York, USA
2 Marvik, O.J., T. Dokland, R. Nokling, E. Jacobson, T. Larsen, and B.H. Lindqvist. 1995. The capsid size-determining protein Sid forms an external scaffold on phage P4 procapsids. J. Mol. Biol. 251, 59-75   DOI   ScienceOn
3 Norrander, J., T. Kempe, and J. Messing. 1983. Construction of improved M13 vectors using oligodeoxynucIeotidedirected mutagenesis. Gene 26, 101-112   DOI   ScienceOn
4 Raimondi, A., R. Donghi, A. Montaguti, A. Pessina, and G. Deho. 1985. Analysis of spontaneois deletion mutants of satellite bacteriophage P4. J. Virol. 54, 233-235
5 Shore, D., G. Deho, J. Tsipis, and R. Goldstein. 1978. Determination of capsid size by satellite bacteriophage P4. Proc. Natl. Acad. Sci. USA 75, 400-404
6 Six, E.W. and C.A.C. Klug. 1973. Bacteriophage P4: A satellite virus depending on a helper such as prophage P2. Virology 51, 327-344   DOI   ScienceOn
7 Dokland, T., B.H. Lindqvist, and S.D. Fuller. 1992. Image reconstruction from cryo-electron micrographs reveals the morphopoietic mechanism in the P2-P4 bacteriophage system. EMBO J. 11, 839-846
8 Parkinson, J.S. and R.J. Huskey. 1971. Deletion mutants of bacteriophage lambda. I: isolation and initial characterization. J. Mol. BioI. 56, 369-384   DOI
9 Ghisotti, D., S. Finkel, C. Halling, G. Deho, G. Sironi, and R. Calendar. 1990. Nonessential region of bacteriophage P4: DNA sequence, transcription, gene products and functions. J. Virol. 64, 24-36
10 Nilssen, O., E.W. Six, M.G. Sunshine, and B.H. Lindqvist. 1996. Mutational analysis of the bacteriophage P4 capsid-size-determining gene. Virology 219, 432-442   DOI   ScienceOn
11 Sambrook, J. and D.W. Russell. 2001. Molecular Cloning: a laboratory manual (3rd ed.). Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, USA
12 Sasaki, I. and G. Bertani. 1965. Growth abnormalities in Hfr derivatives of Escherichia coli strain C. J. Gen. Microbiol. 40, 365-376   DOI   ScienceOn
13 Kim, K.J., M.G. Sunshine, B.H. Lindqvist, and E.W Six. 2001. Capsid size determination in the P2-P4 bacteriophage system: suppression of sir mutations in P2's capsid gene N by supersid mutations in P4's external scaffold gene sid. Virology 283, 49-58   DOI   ScienceOn
14 Ziermann, R., E.W. Six, B. Julien, and R. Calendar. 1993. Bacteriophage N. vol. 1, p. 70-74. In S. J. O'Brien (ed). Genetic map, 6th ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, USA
15 Wang, S., J.R. Chang, and T. Dokland. 2006. Assembly of bacteriophage P2 and P4 procapsids with internal scaffolding protein. Virology 348, 133-140   DOI   ScienceOn
16 Guttman, B., R. Raya, and E. Kutter. 2004. Basic phage biology, p. 29-66. In E. Kutter, and A. Sulakvelidze (ed). Bacteriophage: biology and applications. CRC Press, Boca Raton, Florida, USA
17 Lindqvist, B.H., G. Deho, and R. Calendar. 1993. Mechanism of genome propagation and helper exploitation by satellite phage P4. Microbio. Rev. 57, 683-702
18 Bertani, G. and D.K. Chattoraj. 1980. Tandem pentuplication of a DNA segment in a derivative of bacteriophage P2: its use in the study of the mechanism of DNA annealing. Nucleic Acids Res. 8, 1339-1356   DOI
19 Six, E.W., M.G. Sunshine, J. Williams, E. Haggard-Ljungquist, and B.H. Lindqvist. 1991. Morphoietic switch mutations of bacteriophage P2. Virology 182, 34-46   DOI   ScienceOn
20 Lin, C.S. 1984. Nucleotide sequence of the essential region of bacteriophage P4. Nucleic Acids Res. 12, 8667-8684   DOI
21 Kim, K.J. 1998. Development of selectable vector plasmid in bacteriophage P2-P4 system and its stability. The Korean J. Microbiol. 34, 236-242