An Efficient Functional Analysis Method for Micro-array Data Using Gene Ontology |
Hong, Dong-Wan
(Department of Computer Engineering, Hallym University)
Lee, Jong-Keun (Department of Computer Engineering, Hallym University) Park, Sung-Soo (Department of Computer Engineering, Hallym University) Hong, Sang-Kyoon (Department of Computer Engineering, Hallym University) Yoon, Jee-Hee (Department of Computer Engineering, Hallym University) |
1 | http://www.geneontology.org/ |
2 | M. Smid and L. C. J. Dorssers, 'GO-Mapper: functional analysis of gene expression data using the expression level as a score to evaluate Gene Ontology terms,' Bioinformatics, Vol. 20, no. 16, pp. 2618-2625, 2004 DOI ScienceOn |
3 | E. LaTulippe, J. Satagopan, A. Smith, H. Scher, P. Scardino, V. Reuter and W. L. Gerald, 'Comprehensive Gene Expression Analysis of Prostate Cancer Reveals Distinct Transcriptional Programs Associated with Metastatic Disease,' Cancer Research, vol. 62, pp. 4499-4509, 2002 |
4 | P. Khatri and S.Draghici, 'Ontological analysis of gene expression data: current tools, limitations and open problems,' Bioinformatics, Vol. 21, no. 18, pp. 3587-3595, 2005 DOI ScienceOn |
5 | F. AI-Shahrour, R. Diaz-Uriarte and J. Dopazo, 'FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes,' Bioinformatics, Vol. 20, no. 4, pp. 578-580, 2004 DOI ScienceOn |
6 | A. Young, N. Whitehouse, J. Cho and C. Shaw, 'Ontology Traverser: and R package for GO analysis,' Bioinformatics, Vol. 21, no. 2, pp 275-276, 2005 DOI ScienceOn |
7 | http://www.nbn.ac.za/Education/14-microarray - 2004 |
8 | B. Adryan and R. Schuh, 'Gene-Ontology-based clustering of gene expression data,' Bioinformatics, Vol. 20, no. 16,pp.2851-2852, 2004 DOI ScienceOn |
9 | P. N. Robinson, A. Wollstein, U. Bohme and B. Beattie, 'Ontologizing gene-expression micro-array data: characterizing clusters with Gene Ontology,' Bioinformatics, Vol. 20, no. 6, pp. 979-981, 2004 DOI ScienceOn |
10 | P. Khatri, S. Draghici, G. C. Ostermeier and S. A. Krawetz, 'Profiling Gene Expression Using Onto-Express,' Genomics, Vol. 79, no. 2, pp. 266-270, 2002 DOI ScienceOn |
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