Bovine Genome-wide Association Study for Genetic Elements to Resist the Infection of Foot-and-mouth Disease in the Field |
Lee, Bo-Young
(Department of Agricultural Biotechnology, Animal Biotechnology Major, and Research Institute for Agriculture and Life Sciences, Seoul National University)
Lee, Kwang-Nyeong (Foot-and-Mouth Disease Division, Animal and Plant Quarantine Agency) Lee, Taeheon (Department of Agricultural Biotechnology, Animal Biotechnology Major, and Research Institute for Agriculture and Life Sciences, Seoul National University) Park, Jong-Hyeon (Foot-and-Mouth Disease Division, Animal and Plant Quarantine Agency) Kim, Su-Mi (Foot-and-Mouth Disease Division, Animal and Plant Quarantine Agency) Lee, Hyang-Sim (Foot-and-Mouth Disease Division, Animal and Plant Quarantine Agency) Chung, Dong-Su (Gangwon Veterinary Service Laboratory) Shim, Hang-Sub (Gyeonggido Veterinary Service) Lee, Hak-Kyo (Genomic Informatics Center, Hankyong National University) Kim, Heebal (Department of Agricultural Biotechnology, Animal Biotechnology Major, and Research Institute for Agriculture and Life Sciences, Seoul National University) |
1 | Bachrach, H. L. 1985. Foot-and-mouth disease and its antigens. Adv. Exp. Med. Biol. 185:27-46. DOI |
2 | Belsham, G. J. 1993. Distinctive features of foot-and-mouth disease virus, a member of the picornavirus family; aspects of virus protein synthesis, protein processing and structure. Prog. Biophys. Mol. Biol. 60:241-260. DOI ScienceOn |
3 | Gerner, W., B. V. Carr, K. H. Wiesmuller, E. Pfaff, A. Saalmuller, and B. Charleston. 2007. Identification of a novel foot-andmouth disease virus specific T-cell epitope with immunodominant characteristics in cattle with MHC serotype A31. Vet. Res. 38:565-572. DOI ScienceOn |
4 | Haghparast, A., M. H. M. Wauben, M. C. Grosfeld-Stulemeyer, P. van Kooten, and E. J. Hensen. 2000. Selection of T-cell epitopes from foot-and-mouth disease virus reflects the binding affinity to different cattle MHC class II molecules. Immunogenetics 51:733-742. DOI |
5 | Gorlov, I. P., P. Meyer, T. Liloglou, J. Myles, M. B. Boettger, A. Cassidy, L. Girard, J. D. Minna, R. Fischer, S. Duffy, M. R. Spitz, K. Haeussinger, S. Kammerer, C. Cantor, R. Dierkesmann, J. K. Field, and C. I. Amos. 2007. Seizure 6-like (SEZ6L) gene and risk for lung cancer. Cancer Res. 67:8406-8411. DOI ScienceOn |
6 | Grubman, M. J. and B. Baxt. 2004. Foot-and-mouth disease. Clin. Microbiol. Rev. 17:465-493. DOI |
7 |
Guzman, E., G. Taylor, B. Charleston, M. A. Skinner, and S. A. Ellis. 2008. An MHC-restricted |
8 | Janeway, C., P. Travers, M. Walport, and M. Shlomchik. 2001. Immunobiology, 4 ed. Garland Science, New York, USA. |
9 | Male, D. 2006. Mechanisms of innate imnmunity. In: Immunology (Eds. D. Male, J. Brostoff, and D. Roth), 7 ed. Elsevier Health Sciences, Philadelphia, PA, USA. pp. 127-144. |
10 | Morerio, C., M. Acquila, A. Rapella, E. Tassano, C. Rosanda, and C. Panarello. 2006. Inversion (11)(p15q22) with NUP98-DDX10 fusion gene in pediatric acute myeloid leukemia. Cancer Genet. Cytogenet. 171:122-125. DOI ScienceOn |
11 | Nakano, T., M. Tani, M. Nishioka, T. Kohno, A. Otsuka, S. Ohwada, and J. Yokota. 2005. Genetic and epigenetic alterations of the candidate tumor-suppressor gene MYO18B, on chromosome arm 22q, in colorectal cancer. Genes Chromosomes Cancer 43:162-171. DOI ScienceOn |
12 | Nishiyama, M., Y. Arai, Y. Tsunematsu, H. Kobayashi, K. Asami, M. Yabe, S. Kato, M. Oda, H. Eguchi, M. Ohki, and Y. Kaneko. 1999. 11p15 translocations involving the NUP98 gene in childhood therapy-related acute myeloid leukemia/myelodysplastic syndrome. Genes Chromosomes Cancer 26:215-220. DOI |
13 | Nakao, K., M. Nishino, K. Takeuchi, M. Iwata, A. Kawano, Y. Arai, and M. Ohki. 2000. Fusion of the nucleoporin gene, NUP98, and the putative RNA Helicase Gene, DZXX10, by Inversion 11 (p15q22) chromosome translocation in a patient with etoposide-related myelodysplastic syndrome. Intern. Med. 39:412-415. DOI |
14 | Purcell, S., B. Neale, K. Todd-Brown, L. Thomas, M. A. R. Ferreira, D. Bender, J. Maller, P. Sklar, P. I. W. De Bakker, M. J. Daly, and P. C. Sham. 2007. PLINK: a tool set for wholegenome association and population-based linkage analyses. Am. J. Hum. Genet. 81:559-575. DOI ScienceOn |
15 | Nishioka, M., T. Kohno, M. Takahashi, T. Niki, T. Yamada, S. Sone, and J. Yokota. 2000. Identification of a 428-kb homozygously deleted region disrupting the SEZ6L gene at 22q12.1 in a lung cancer cell line. Oncogene 19:6251-6260. DOI |
16 | Nishioka, M., T. Kohno, M. Tani, N. Yanaihara, Y. Tomizawa, A. Otsuka, S. Sasaki, K. Kobayashi, T. Niki, A. Maeshima, Y. Sekido, J. D. Minna, S. Sone, and J. Yokota. 2002. MYO18B, a candidate tumor suppressor gene at chromosome 22q12.1, deleted, mutated, and methylated in human lung cancer. Proc. Natl. Acad. Sci. USA. 99:12269-12274. DOI ScienceOn |
17 | Pahl, R. and H. Schafer. 2010. PERMORY: an LD-exploiting permutation test algorithm for powerful genome-wide association testing. Bioinformatics 26:2093-2100. DOI ScienceOn |
18 | Yokota, J. and T. Kohno. 2004. Molecular footprints of human lung cancer progression. Cancer Sci. 95:197-204. DOI ScienceOn |
19 | Summerfield, A., L. Guzylack-Piriou, L. Harwood, and K. C. McCullough. 2009. Innate immune responses against foot-andmouth disease virus: Current understanding and future directions. Vet. Immunol. Immunopathol. 128:205-210. DOI ScienceOn |
20 | Tani, M., J. Ito, M. Nishioka, T. Kohno, K. Tachibana, M. Shiraishi, S. Takenoshita, and J. Yokota. 2004. Correlation between histone acetylation and expression of the MYO18B gene in human lung cancer cells. Genes Chromosomes Cancer 40:146-151. DOI ScienceOn |
21 | Sobrino, F., M. Saiz, M. A. Jimenez-Clavero, J. I. Nunez, M. F. Rosas, E. Baranowski, and V. Ley. 2001. Foot-and-mouth disease virus: a long known virus, but a current threat. Vet. Res. 32:1-30. DOI ScienceOn |
22 | Yanaihara, N., M. Nishioka, T. Kohno, A. Otsuka, A. Okamoto, K. Ochiai, T. Tanaka, and J. Yokota. 2004. Reduced expression of MYO18B, a candidate tumor-suppressor gene on chromosome arm 22q, in ovarian cancer. Int. J. Cancer 112:150-154. DOI ScienceOn |
23 | Yokota, J., M. Nishioka, M. Tani, and T. Kohno. 2003. Genetic alterations responsible for metastatic phenotypes of lung cancer cells. Clin. Exp. Metastasis 20:189-193. DOI |
24 | Zhou, F., X. Zhang, H. van Dam, P. ten Dijke, H. Huang, and L. Zhang. 2012. Ubiquitin-specific protease 4 mitigates tolllike/interleukin-1 receptor signaling and regulates innate immune activation. J. Biol. Chem. 287:11002-11010. DOI |
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