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http://dx.doi.org/10.5713/ajas.2014.14017

Polymorphism, Expression of Natural Resistance-associated Macrophage Protein 1 Encoding Gene (NRAMP1) and Its Association with Immune Traits in Pigs  

Ding, Xiaoling (College of Animal Science and Technology, Anhui Agricultural University)
Zhang, Xiaodong (College of Animal Science and Technology, Anhui Agricultural University)
Yang, Yong (Anhui Antai Pig Breeding Co., LTD.)
Ding, Yueyun (College of Animal Science and Technology, Anhui Agricultural University)
Xue, Weiwei (College of Animal Science and Technology, Anhui Agricultural University)
Meng, Yun (College of Animal Science and Technology, Anhui Agricultural University)
Zhu, Weihua (College of Animal Science and Technology, Anhui Agricultural University)
Yin, Zongjun (College of Animal Science and Technology, Anhui Agricultural University)
Publication Information
Asian-Australasian Journal of Animal Sciences / v.27, no.8, 2014 , pp. 1189-1195 More about this Journal
Abstract
Natural resistance-associated macrophage protein 1 encoding gene (NRAMP1) plays an important role in immune response against intracellular pathogens. To evaluate the effects of NRAMP1 gene on immune capacity in pigs, tissue expression of NRAMP1 mRNA was observed by real time quantitative polymerase chain reaction (PCR), and the results revealed NRAMP1 expressed widely in nine tissues. One single nucleotide polymorphism (SNP) (ENSSSCG00000025058: g.130 C>T) in exon1 and one SNP (ENSSSCG00000025058: g.657 A>G) in intron1 region of porcine NRAMP1 gene were demonstrated by DNA sequencing and PCR-RFLP analysis. A further analysis of SNP genotypes associated with immune traits including contain of white blood cell (WBC), granulocyte, lymphocyte, monocyte (MO), rate of cytotoxin in monocyte (MC) and $CD4^-CD8^+$ T lymphocyte subpopulations in blood was carried out in four pig populations including Large White and three Chinese indigenous breeds (Wannan Black, Huai pig and Wei pig). The results showed that the SNP (ENSSSCG00000025058: g.130 C>T) was significantly associated with level of WBC % (p = 0.031), MO% (p = 0.024), MC% (p = 0.013) and $CD4^-CD8^+$ T lymphocyte (p = 0.023). The other SNP (ENSSSCG00000025058: g.657 A>G) was significantly associated with the level of MO% (p = 0.012), MC% (p = 0.019) and $CD4^-CD8^+$ T lymphocyte (p = 0.037). These results indicate that the NRAMP1 gene can be regarded as a molecular marker for genetic selection of disease susceptibility in pig breeding.
Keywords
Pig; Natural Resistance-associated Macrophage Protein 1 (NRAMP1); Polymorphism; Expression; Association;
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1 Tuggle, C. K., C. B. Schmitz, and D. Gingerich-Feil. 1997. Rapid communication: cloning of a pig full-length NRAMP1 cDNA. J. Anim. Sci. 75:277.
2 Tuggle, C. K., L. Marklund, T. J. Stabel, M. A. Mellencamp, and A. Stumbaugh. 2005. Genetic markers for screening animals for improved disease resistance (NRAMP). United States Patent, Patent No. :US 6,844,159 B2.
3 Capon, F., M. H. Allen, M. Ameen, A. D. Burden, D. Tillman, J. N. Barkerand, and R. C. Trembath. 2004. A synonymous SNP of the corneodesmosin gene leads to increased mRNA stability and demonstrates association with psoriasis across diverse ethnic groups. Hum. Mol. Genet. 13:2361-2368.   DOI   ScienceOn
4 Courville, P., R. Chaloupka, and M. F. Cellier. 2006. Recent progress in structure-function analyses of Nramp protondependent metal-ion transporters. Biochem. Cell Biol. 84:960-978.   DOI   ScienceOn
5 Crawley, A. M., B. Mallard, and B. N. Wilkie. 2005. Genetic selection for high and low immune response in pigs: Effects on immunoglobulin isotype expression. Vet. Immunol. Immunopathol. 108:71-76.   DOI   ScienceOn
6 Gazouli, M., V. Atsaves, G. Mantzaris, M. Economou, G. Nasioulas, K. Evangelou, A. J. Archimandritis, and N. P. Anagnou. 2008. Role of functional polymorphisms of NRAMP1 gene for the development of Crohn's disease. Inflamm. Bowel. Dis. 14:1323-1330.   DOI   ScienceOn
7 Hellemans, J., G. Mortier, A. De Paepe, F. Speleman, and J. Vandesompele. 2007. qBase relative quantification framework and software for management and automated analysis of realtime quantitative PCR data. Genome Biol. 8:R19.   DOI
8 Hedges, J. F., E. Kimmel, D. T. Snyder, M. Jerome, and M. A. Jutila. 2013. Solute carrier 11A1 is expressed by innate lymphocytes and augments their activation. J. Immunol. 190:4263-4273.   DOI   ScienceOn
9 Kimchi-Sarfaty, C., J. M. Oh, I. W. Kim, Z. E. Sauna, A. M. Calcagno, S. V. Ambudkar, and M. M. Gottesman. 2007. A "silent" polymorphism in the MDR1 gene changes substrate specificity. Science 315(5811):525-528.   DOI   ScienceOn
10 Ates, O., L. Dalyan, B. Musellim, G. Hatemi, H. Turker, G. Ongen, V. Hamuryudan, and A. Topal-Sarikaya. 2009. NRAMP1 (SLC11A1) gene polymorphisms that correlate with autoimmune versus infectious disease susceptibility in tuberculosis and rheumatoid arthritis. Int. J. Immunogenet. 36: 15-19.   DOI   ScienceOn
11 Blackwell, J. M., S. Searle, T. Goswami, and E. N. Miller. 2000. Understanding the multiple functions of Nramp1. Microbes Infect. 2:317-321.   DOI   ScienceOn
12 Blackwell, J. M., S. Searle, H. Mohamed, and J. K. White. 2003. Divalent cation transport and susceptibility to infectious and autoimmune disease: Continuation of the Ity/Lsh/Bcg/Nramp1/ Slc11a1 gene story. Immunol. Lett. 85:197-203.   DOI   ScienceOn
13 Pauly, T., K. Elbers, M. Konig, T. Lengsfeld, A. Saalmuller, and H. J. Thiel. 1995. Classical swine fever virus-specific cytotoxic T lymphocytes and identification of a T cell epitope. J. Gen. Virol. 76:3039-3049.   DOI   ScienceOn
14 Vidal, S. M., D. Malo, K. Vogan, E. Skamene, and P. Gros. 1993. Natural resistance to infection with intracellular parasites: isolation of a candidate for Bcg. Cell 73:469-485.   DOI   ScienceOn
15 Wu, H., D. Cheng, and L. Wang. 2008. Association of polymorphisms of Nramp1 gene with immune function and production performance of Large White pig. J. Genet. Genomics 35:91-95.   DOI   ScienceOn
16 Wyllie, S., P. Seu, and J. A. Goss. 2002. The natural resistanceassociated macrophage protein 1 NRAMP1 (formerly Nramp1) and iron metabolism in macrophages. Microbes Infect. 4:351-359.   DOI   ScienceOn
17 Yang, J. H., K. Downes, J. M. Howson, S. Nutland, H. E. Stevens, N. M. Walker, and J. A. Todd. 2011. Evidence of association with type 1 diabetes in the SLC11A1 gene region. BMC Med. Genet. 12:59.
18 Liu, Y., X. T. Qiu, J. J. Xu, F. Hu, Y. H. Li, H. J. Li, Y. F. Gong, and Q. Zhang. 2011. Association analysis between the polymorphism of the SLC11A1 gene and immune response traits in pigs. Asian J. Anim. Vet. Adv. 6:580-586.   DOI
19 Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor Laboratory Press, New York, USA.
20 Sapkota, B. R., M. Hijikata, I. Matsushita, G. Tanaka, R. Ieki, N. Kobayashi, E. Toyota, H. Nagai, A. Kurashima, K. Tokunaga, and N. Keicho. 2012. Association of SLC11A1 (NRAMP1) polymorphisms with pulmonary Mycobacterium avium complex infection. Hum. Immunol. 73:529-536.   DOI   ScienceOn
21 Smit, J. J., G. Folkerts, and F. P. Nijkamp. 2004. Ramp-ing up allergies: Nramp1 (Slc11a1), macrophages and the hygiene hypothesis. Trends Immunol. 25:342-347.   DOI   ScienceOn
22 Tanaka, G., J. Shojima, I. Matsushita, H. Nagai, A. Kurashima, K. Nakata, E. Toyota, N. Kobayashi, K. Kudo, and N. Keicho. 2007. Pulmonary Mycobacterium avium complex infection: Association with NRAMP1 polymorphisms. Eur. Respir. J. 30: 90-96.   DOI   ScienceOn
23 Canonne-Hergaux, F., S. Gruenheid, P. Ponka, and P. Gros. 1999. Cellular and subcellular localization of the Nramp2 iron transporter in the intestinal brush border and regulation by dietary iron. Blood 93:4406-4417.
24 Meilang, Q., Y. Zhang, J. Zhang, Y. Zhao, C. Tian, J. Huang, and H. Fan. 2012. Polymorphisms in the SLC11A1 gene and tuberculosis risk: a meta-analysis update. Int. J. Tuberc. Lung Dis. 16:437-446.   DOI   ScienceOn
25 He, X. M., M. X. Fang, Z. T. Zhang, Y. S. Hu, X. Z. Jia, D. L. He, S. D. Liang, Q. H. Nie, and X. Q. Zhang. 2013. Characterization of chicken natural resistance-associated macrophage protein encoding genes (Nramp1 and Nramp2) and association with salmonellosis resistance. Genet. Mol. Res. 12:618-630.   DOI   ScienceOn