1 |
Deplancke, B., K. Hristova, H. Oakley, V. McCracken, R. Aminov, R. Mackie, and H. Gaskins. 2000. Molecular ecological analysis of the succession and diversity of sulfate-reducing bacteria in the mouse gastrointestinal tract. Appl. Environ. Microbiol. 66:2166-2174.
DOI
|
2 |
Backhed, F., H. Ding, T. Wang, L. V. Hooper, G. Y. Koh, A. Nagy, C. F. Semenkovich, and J. I. Gordon. 2004. The gut microbiota as an environmental factor that regulates fat storage. Proc. Natl. Acad. Sci. USA 101:15718-15723.
DOI
ScienceOn
|
3 |
Backhed, F., R. E. Ley, J. L. Sonnenburg, D. A. Peterson, and J. I. Gordon. 2005. Host-bacterial mutualism in the human intestine. Science 307:1915-1920.
DOI
ScienceOn
|
4 |
Denman, S. E., N. W. Tomkins, and C. S. McSweeney. 2007. Quantitation and diversity analysis of ruminal methanogenic populations in response to the antimethanogenic compound bromochloromethane. FEMS Microbiol. Ecol. 62:313-322.
DOI
|
5 |
Devkota, S., Y. Wang, M. W. Musch, V. Leone, H. Fehlner-Peach, A. Nadimpalli, D. A. Antonopoulos, B. Jabri, and E. B. Chang. 2012. Dietary-fat-induced taurocholic acid promotes pathobiont expansion and colitis in Il10-/-mice. Nature 487:104-108.
|
6 |
DiBaise, J. K., H. Zhang, M. D. Crowell, R. Krajmalnik-Brown, G. A. Decker, and B. E. Rittmann. 2008. Gut microbiota and its possible relationship with obesity. Mayo Clin. Proc. 83:460-469.
DOI
ScienceOn
|
7 |
Guo, X., X. Xia, R. Tang, and K. Wang. 2008. Real-time PCR quantification of the predominant bacterial divisions in the distal gut of Meishan and Landrace pigs. Anaerobe 14:224-228.
DOI
ScienceOn
|
8 |
Li, X., L. Zhu, Y. Jiang, and T. Si. 2011. Evaluation of the Chinese indigenous pig breed Dahe and crossbred Dawu for growth and carcass characteristics, organ weight, meat quality and intramuscular fatty acid and amino acid composition. Animal 5:1485-1492.
DOI
ScienceOn
|
9 |
Leser, T. D., J. Z. Amenuvor, T. K. Jensen, R. H. Lindecrona, M. Boye, and K. Moller. 2002. Culture-independent analysis of gut bacteria: The pig gastrointestinal tract microbiota revisited. Appl. Environ. Microbiol. 68:673-690.
DOI
|
10 |
Ley, R. E., F. Backhed, P. Turnbaugh, C. A. Lozupone, R. D. Knight, and J. I. Gordon. 2005. Obesity alters gut microbial ecology. Proc. Natl. Acad. Sci. USA 102:11070-11075.
DOI
ScienceOn
|
11 |
Ley, R. E., P. J. Turnbaugh, S. Klein, and J. I. Gordon. 2006. Microbial ecology: Human gut microbes associated with obesity. Nature 444:1022-1023.
DOI
ScienceOn
|
12 |
Luo, Y. H., Y. Su, A. D. G. Wright, L. L. Zhang, H. Smidt, and W. Y. Zhu. 2012. Lean breed Landrace pigs harbor fecal methanogens at higher diversity and density than obese breed Erhualian pigs. Archaea 10. Article ID 605289.
|
13 |
Mao, S. Y., C. F. Yang, and W. Y. Zhu. 2011. Phylogenetic analysis of methanogens in the pig feces. Curr. Microbiol. 62:1386-1389.
DOI
|
14 |
Mao, S. Y., W. Huo, and W. Y. Zhu. 2013. Use of pyrosequencing to characterize the microbiota in the ileum of goats fed with increasing proportion of dietary grain. Curr. Microbiol. 67:341-350.
DOI
ScienceOn
|
15 |
Mo, D., B. Liu, Z. Wang, S. Zhao, M. Yu, B. Fan, M. Li, S. Yang, G. Zhang, and T. Xiong. 2003. Genetic variation and genetic relationship of seventeen Chinese indigenous pig breeds using ten serum protein loci. Asian Australas. J. Anim. Sci. 16:939-945.
DOI
|
16 |
Mueller, S., K. Saunier, C. Hanisch, E. Norin, L. Alm, T. Midtvedt, A. Cresci, S. Silvi, C. Orpianesi, and M. C. Verdenelli. 2006. Differences in fecal microbiota in different European study populations in relation to age, gender, and country: A cross-sectional study. Appl. Environ. Microbiol. 72:1027-1033.
DOI
ScienceOn
|
17 |
Muyzer, G., E. C. de Waal, and A. G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59:695-700.
|
18 |
Schwiertz, A., D. Taras, K. Schafer, S. Beijer, N. A. Bos, C. Donus, and P. D. Hardt. 2010. Microbiota and SCFA in lean and overweight healthy subjects. Obesity 18:190-195.
DOI
|
19 |
Nicholson, J. K., E. Holmes, J. Kinross, R. Burcelin, G. Gibson, W. Jia, and S. Pettersson. 2012. Host-gut microbiota metabolic interactions. Science 336:1262-1267.
DOI
ScienceOn
|
20 |
Nubel, U., B. Engelen, A. Felske, J. Snaidr, A. Wieshuber, R. I. Amann, W. Ludwig, and H. Backhaus. 1996. Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis. J. Bacteriol. 178:5636-5643.
|
21 |
Sekirov, I., S. L. Russell, L. C. Antunes, and B. B. Finlay. 2010. Gut microbiota in health and disease. Physiol. Rev. 90:859-904.
DOI
ScienceOn
|
22 |
Suzuki, M. T., L. T. Taylor, and E. F. DeLong. 2000. Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5'-nuclease assays. Appl. Environ. Microbiol. 66:4605-4614.
DOI
ScienceOn
|
23 |
Timm, D. A., W. Thomas, T. W. Boileau, P. S. Williamson-Hughes, and J. L. Slavin. 2013. Polydextrose and soluble corn fiber increase five-day fecal wet weight in healthy men and women. J. Nutr. 143:473-478.
DOI
ScienceOn
|
24 |
Tremaroli, V. and F. Backhed. 2012. Functional interactions between the gut microbiota and host metabolism. Nature 489:242-249.
DOI
ScienceOn
|
25 |
Zoetendal, E. G., A. D. Akkermans, and W. M. De Vos. 1998. Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria. Appl. Environ. Microbiol. 64:3854-3859.
|
26 |
Samuel, B. S. and J. I. Gordon. 2006. A humanized gnotobiotic mouse model of host-archaeal-bacterial mutualism. Proc. Natl. Acad. Sci. USA 103:10011-10016.
DOI
ScienceOn
|
27 |
Turnbaugh, P. J., R. E. Ley, M. A. Mahowald, V. Magrini, E. R. Mardis, and J. I. Gordon. 2006. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444:1027-1031.
DOI
ScienceOn
|
28 |
Turroni, F., A. Ribbera, E. Foroni, D. van Sinderen, and M. Ventura. 2008. Human gut microbiota and bifidobacteria: from composition to functionality. Antonie van Leeuwenhoek 94:35-50.
DOI
ScienceOn
|
29 |
Xu, X., P. Xu, C. Ma, J. Tang, and X. Zhang. 2013. Gut microbiota, host health, and polysaccharides. Biotechnol. Adv. 31:318-337.
DOI
ScienceOn
|
30 |
Fernandes, J., A. Wang, W. Su, S. R. Rozenbloom, A. Taibi, E. M. Comelli, and T. M. Wolever. 2013. Age, dietary fiber, breath methane, and fecal short chain fatty acids are interrelated in Archaea-Positive humans. J. Nutr. 143:1269-1275.
DOI
ScienceOn
|
31 |
Spor, A., O. Koren, and R. Ley. 2011. Unravelling the effects of the environment and host genotype on the gut microbiome. Nat. Rev. Microbiol. 9:279-290.
DOI
ScienceOn
|