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http://dx.doi.org/10.5713/ajas.2002.1386

Construction of Genetic Microsatellite Maps for Some Chromosomes in Chinese Swine Reference Population  

Su, Yuhong (Key Laboratory of Pig Genetics and Breeding, Ministry of Agriculture, China, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University)
Xiong, Yuanzhu (Yuanzhu Xiong)
Zhang, Qin (College of Animal Science, China Agricultural University)
Liu, Weimin (Key Laboratory of Pig Genetics and Breeding, Ministry of Agriculture, China, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University)
Jiang, Siwen (Key Laboratory of Pig Genetics and Breeding, Ministry of Agriculture, China, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University)
Yu, Li (Key Laboratory of Pig Genetics and Breeding, Ministry of Agriculture, China, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University)
Xia, Xuanyan (Key Laboratory of Pig Genetics and Breeding, Ministry of Agriculture, China, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University)
Zeng, Rong (Key Laboratory of Pig Genetics and Breeding, Ministry of Agriculture, China, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University)
Deng, Changyan (Key Laboratory of Pig Genetics and Breeding, Ministry of Agriculture, China, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University)
Publication Information
Asian-Australasian Journal of Animal Sciences / v.15, no.10, 2002 , pp. 1386-1390 More about this Journal
Abstract
In aiming to identify the genes or genetic regions responsible for quantitative traits, a swine reference population had been constructed using three Large White boars and seven Meishan dams as parents. Five $F_1$ males and 23 $F_1$ females were intercrossed to generate 147 $F_2$ offspring. Thirty-one microsatellite markers covering Sus scrofa chromosomes (SSC) 2, 4, 6 and 7 were genotyped for all members. Construction of genetic microsatellite maps was performed using the CRIMAP software package. The lengths of these chromosomes were longer than MARC maps. They were 158.6cM, 180.3cM, 197.3cM and 171.4cM, respectively. A two modified orders of markers were observed for SSC6 and SSC7. The female map on SSC6 was shorter than male map, and the contrary was on SSC 2, 4 and 7.
Keywords
Swine; Chromosomes 2; 4; 6; and 7; Crimap Software; Linkage Maps;
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1 Bassam, B. J., G. Caetano-Anolles and P. M. Gresshoff. 1991. Fast and sensitive silver staining of DNA in polyacrylamide gels. Anal. Biochem. 196:80-83.   DOI   ScienceOn
2 Paszek, A. A., L. B. Schook, C. F. Louis, J. R. Michelson, G. H. Flickinger, J. Murtaugh, J. R. Mendiola, M. A. Janzen, C. W. Beattie, G. A. Rohrer, L. J. Alexander, L. Andersson, H. Ellegren, M. Johansson, P. Mariani, L. Marklund, B. Hoyheim, W. Davies, M. Fredholm, A. L. Archibald and C. S. Haley. 1995. First international workshop on porcine chromosome 6. Anim. Genet. 26:377-401.   DOI   ScienceOn
3 Paszek, A. A., L. Andersson, P. Mariani, L. Marklund, M. Fredholm, B. Hoyheim, A. L. Archibald, V. H. Nielsen, D. Milan and M. A. M. Groenen. 1997. A consensus linkage map for swine chromosome 7. Anim. Genet. 28:223-229.   DOI   ScienceOn
4 Rattink, A. P., D. J. de Koning, M. Faivre, B. Harlizins, J. A. M van Arendonk and M. A. M. Groenen. 2000. Fine mapping and imprinting analysis for fatness trait QTLs in pigs. Mamm. Genome. 11:656-661.   DOI   ScienceOn
5 Rohrer, G. A., L. J. Alexander, Z. Hu, T. P. L. Smith, J. W. Keele and C. W. Beattie. 1996. A comprehensive map of the porcine genome. Genome Res. 6:371-391.   DOI   ScienceOn
6 Su, Y. H., R. Zeng, S. W. Jiang, C. Y. Deng and Y. Z. Xiong. 2000. Research on polymorphism of 12 microsatellite markers in reference family by Large White ${\times}$ Meishan pigs. Animal Biotechnology Bulletin. 7:166-170.
7 Haley, C. S. and S. A. Knott. 1992. A simple regression method for mapping quantitative trait loci in line crosses using flanking markers. Heredity. 69:315-324.
8 Ellegren, H., B. Chowdhary, M. Johansson and L. Andersson. 1994. Integrating the porcine physical and linkage map using cosmid-derived markers. Anim. Genet. 25:155-164.   DOI   ScienceOn
9 Ott, J. 1993. Analysis of Human Genetic Linkage. Revised edition. The Johns Hopkins University Press, Baltimore and London.
10 Wang, L., T.-P. Yu, C. K. Tuggle, H.-C. Liu and M. F. Rothschild. 1998. A directed search for quantitative trait loci on chromosomes 4 and 7 in pigs. J. Anim. Sci. 76:2560-2567.
11 Andersson, L., C. S. Haley, H. Ellegren, S. A. Knott, M. Johansson, K. Anderss, L. Andersson-Eklund, I. Edfors-lilja, M. Fredholm and I. Hansson. 1994. Genetic mapping of quantitative trait loci for growth and fatness in pigs. Science. 263:1771-1774.   DOI
12 Knott, S. A., L. Marklund, C. S. Haley, K. Andersson, W. Davies, H. Ellegren, M. Fredholm, I. Hansson, B. Hoyheim, K. Lundstrom, M. Moller and L. Andersson. 1998. Multiple marker mapping of quantitative trait loci in a cross between outbred wild boar and large white pigs. Genetics. 149:1069-1080.
13 Mikawa, S., T. Akita, N. Hisamatsu, Y. Inage, Y. Ito, E. Kobayashi, H. Kusumoto, T. Matsumoto, H. Mikami, M. Minezawa, S. Shimanuki, C. Sugiyama, Y. Uchida, Y. Wada, S. Yansi and H.Yasae. 1999. A linkage map of 243 DNA markers in an intercross of Gottingen miniature and Meishan pigs. Anim. Genet. 30:407-417.   DOI   ScienceOn
14 Green, P., K. Falls and S. Crooks. 1990. Documentation for CRIMAP. Version 2.4. Washington University School of Medicine, St. Louis. Missouri.
15 SAS Institute Inc. 1989. SAS/STAT User's Guide: Version 6. 4th edu. SAS Institute Inc., Cary, North Carolina.
16 Rohrer, G. A., L. J. Alexander, C. W. Beattie, P. Wilkie, G. H. Flickinger, L. B. Schook, A. A. Paszek, L. Andersson, P. Mariani, L. Marklund, M. Fredholm, B. Hoyheim, A. L. Archibald, V. H. Nielsen, D. Milan and M. A. M. Groenen. 1997. A consensus linkage map for swine chromosome 7. Anim. Genet. 28:223-229.   DOI   ScienceOn
17 Archibald, A. L., C. Haley, J. Brown, S. Couperwhite, H. McQueen, D. Nicholson, W. Coppieters, A. Van de Weghe, A. Stratil, A. Wintero, M. Fredholm, N.. Larsen, V. Nielsen, D. Milan, N. Woloszyn, A. Robic, M. Dalens, J. Riquet, J. Gellin and J. C. Caritez. 1995. The PiGMaP consortium linkage map of the pig (Sus scrofa). Mamm. Genome. 6:157-175.   DOI
18 Alexander, L. J., G. A. Rohrer and C. W. Beattie. 1996. Cloning and characterization of 414 polymorphic porcine microsatellites. Anim. Genet. 27:137-148.   DOI   ScienceOn
19 De Koning, D. J., L. L. G. Janss, A. P. Rattink, P. A. M. van Oers, B. J. de Veries, M. A. M. Groenen, J. J. van der Poel, P. N. de Groot, E. W. (Pim) Brascamp and J. A. M. van Arendonk. 1999. Detection of quantitative trait loci for backfat thickness and intramuscular fat content in pigs (Sus scrofa). Genetics. 152:1679-1690.
20 Marklund, L., M. J. Moller and B. Hoyheim. 1996. A comprehensive linkage map of the pig based on a wild pig-Large White intercross. Anim. Genet. 27:155-169.