Current Challenges of Streptococcus Infection and Effective Molecular, Cellular, and Environmental Control Methods in Aquaculture |
Mishra, Anshuman
(Institute of Systems Biology, Pusan National University)
Nam, Gyu-Hwi (Institute of Systems Biology, Pusan National University) Gim, Jeong-An (Institute of Systems Biology, Pusan National University) Lee, Hee-Eun (Institute of Systems Biology, Pusan National University) Jo, Ara (Institute of Systems Biology, Pusan National University) Kim, Heui-Soo (Institute of Systems Biology, Pusan National University) |
1 | Austin, B., and Austin, D.A. (2007). Bacterial fish pathogens: disease of farmed and wild fish. Springer Science & Business Media. |
2 | Baeck, G.W., Kim, J.H., Gomez, D.K., and Park, S.C. (2006). Isolation and characterization of Streptococcus sp. from diseased flounder (Paralichthys olivaceus) in Jeju Island. J. Vet. Sci. 7, 53-58. DOI |
3 | Barnes, A.C., and Ellis, A.E. (2004). Role of capsule in serotypic differences and complement fixation by Lactococcus garvieae. Fish Shellfish Immunol. 16, 207-214. DOI |
4 | Barnes, A.C., Guyot, C., Hansen, B.G., Mackenzie, K., Horne, M.T., and Ellis, A.E. (2002). Resistance to serum killing may contribute to differences in the abilities of capsulate and non-capsulated isolates ofLactococcus garvieae to cause disease in rainbow trout (Oncorhynchus mykiss L.). Fish Shellfish Immunol. 12, 155-168. DOI |
5 | Barnett, T.C., Cole, JN., Rivera-Hernandez, T., Henningham, A., Paton, J.C., Nizet, V., and Walker, M.J. (2015). Streptococcal toxins: role in pathogenesis and disease. Cell Microbiol. 17, 1721-1741. DOI |
6 | Bennedsen, M., Stuer-Lauridsen, B., Danielsen, M., and Johansen, E. (2011). Screening for antimicrobial resistance genes and virulence factors via genome sequencing. Appl. Environ. Microbiol. 77, 2785-2787. DOI |
7 | Bondad-Reantaso, M.G., Subasinghe, R.P., Arthur, J.R., Ogawa, K., Chinabut, S., Adlard, R., Tan, Z., and Shariff, M. (2005). Disease and health management in Asian aquaculture. Vet. Parasitol. 132, 249-272. DOI |
8 | Bosshard, P.P., Zbinden, R., Abels, S., Boddinghaus, B., Altwegg, M., and Bottger, E.C. (2006). 16S rRNA gene sequencing versus the API 20 NE system and the VITEK 2 ID-GNB card for identification of nonfermenting Gram-negative bacteria in the clinical laboratory. J. Clin. Microbiol. 44, 1359-1366. DOI |
9 | Bromage, E.S., Thomas, A., and Owens, L. (1999). Streptococcus iniae, a bacterial infection in barramundi Lates calcarifer. Dis. Aquat. Organ. 36, 177-181. DOI |
10 | Brimil, N., Barthell, E., Heindrichs, U., Kuhn, M., Lutticken, R., and Spellerberg, B. (2006). Epidemiology of Streptococcus agalactiae colonization in Germany. Int. J. Med. Microbiol. 296, 39-44. |
11 | Buchanan, J.T., Colvin, K.M., Vicknair, M.R., Patel, S.K., Timmer, A.M., and Nizet, V. (2008). Strain-associated virulence factors of Streptococcus iniae in hybrid-striped bass. Vet. Microbiol. 131, 145-153. DOI |
12 | Nho, S.W., Shin, G.W., Park, S.B., Jang, H.B., Cha, I.S., Ha, M.A., Kim, Y.R., Park, Y.K., Dalvi, R.S., Kang, B.J., et al. (2009). Phenotypic characteristics of Streptococcus iniae and Streptococcus parauberis isolated from olive flounder (Paralichthys olivaceus). FEMS Microbiol. Lett. 293, 20-27. DOI |
13 | Mora, D., Ricci, G., Guglielmetti, S., Daffonchio, D., and Fortina, M.G. (2003). 16S-23S rRNA intergenic spacer region sequence variation in Streptococcus thermophilus and related dairy streptococci and development of a multiplex ITS-SSCP analysis for their identification. Microbiology 149, 807-813. DOI |
14 | Muzquiz, J., Royo, F., Ortega, C., De Blas, I., Ruiz, I., and Alonso, J. (1999). Pathogenicity of streptococcosis in rainbow trout (Oncorhynchus mykiss): dependence on age of diseased fish. Bull. Eur. Ass. Fish Pathol. 19, 114-119. |
15 | Kwong, J.C., McCallum, N., Sintchenko, V., and Howden, B.P. (2015). Whole genome sequencing in clinical and public health microbiology. Pathology 47, 199-210. DOI |
16 | Nho, S.W., Hikima, J., Park, S.B., Jang, H.B., Cha, I.S., Yasuike, M., Nakamura, Y., Fujiwara, A., Sano, M., Kanai, K., et al. (2013). Comparative genomic characterization of three Streptococcus parauberis strains in fish pathogen, as assessed by wide-genome analyses. PLoS One 8, e80395. DOI |
17 | Nielsen, X.C., Justesen, U.S., Dargis, R., Kemp, M., and Christensen, J.J. (2009). Identification of clinically relevant nonhemolytic Streptococci on the basis of sequence analysis of 16S-23S intergenic spacer region and partial gdh gene. J. Clin. Microbiol. 47, 932-939. DOI |
18 | Chain, P.S., Grafham, D.V., Fulton, R.S., Fitzgerald, M.G., Hostetler, J., Muzny, D., Ali, J., Birren, B., Bruce, D.C., Buhay, C., et al. (2009). Genomics. Genome project standards in a new era of sequencing. Science 326, 236-237. DOI |
19 | Carson, J., Gudkovs, N., and Austin, B. (1993). Characteristics of an Enterococcus-like bacterium from Australia and South Africa, pathogenic for rainbow trout, Oncorhynchus mykiss (Walbaum). J. Fish Dis. 16, 381-388. DOI |
20 | Carey-Ann, D., Burnhama, and Gregory, J.T. (2003). Virulence factors of group B streptococci. Rev. Med. Microbiol. 14, 109-118. DOI |
21 | Chang, P., and Plumb, J. (1996). Effects of salinity on Streptococcus infection of Nile tilapia, Oreochromis niloticus. J. Appl. Aquaculture. 6, 39-45. |
22 | Cheng, S., Hu, Y.H., Jiao, X.D., and Sun, L. (2010). Identification and immunoprotective analysis of a Streptococcus iniae subunit vaccine candidate. Vaccine 28, 2636-2641. DOI |
23 | Chettri, J.K., Raida, M.K., Holten-Andersen L., Kania, P.W., and Buchmnann, K. (2011). PAMP induced expression of immune relevant genes in head kidney leukocytes of rainbow trout (Oncorhynchus mykiss) Dev. Comp. Immunol. 35, 476-482. DOI |
24 | Dodson, S., Maurer, J., and Shotts, E. (1999). Biochemical and molecular typing of Streptococcus iniae isolated from fish and human cases. J. Fish Dis. 22, 331-336. DOI |
25 | Nishiki, I., Noda, M., Itami, T., and Yoshida, T. (2010). Homogeneity of Streptococcus dysgalactiae from farmed amberjack Seriola dumerili in Japan. Fish. Sci. 76, 661-668. DOI |
26 | Clarridge, J.E., Attorri, S.M., Zhang, Q., and Bartell, J. (2001). 16S ribosomal DNA sequence analysis distinguishes biotypes of Streptococcus bovis: Streptococcus bovis Biotype II/2 is a separate genospecies and the predominant clinical isolate in adult males. J. Clin. Microbiol. 39, 1549-1552. DOI |
27 | Darwish, A.M., and Hobbs, M.S. (2005). Laboratory efficacy of amoxicillin for the control of Streptococcus iniae infection in blue tilapia. J. Aquat. Anim. Health. 17, 197-202. DOI |
28 | Delannoy, C., Zadoks, R., Crumlish, M., Rodgers, D., Lainson, F., Ferguson, H., Turnbull, J., and Fontaine, M. (2016). Genomic comparison of virulent and non-virulent Streptococcus agalactiae in fish. J. Fish Dis. 39, 13-29. DOI |
29 | Diler, O., Altun, S., Adiloglu, A., Kubilay, A., and Istklt, B. (2002). First occurrence of Streptococcosis affecting farmed rainbow trout (Oncorhynchus mykiss) in Turkey. Bull. Eur. Ass. Fish Pathol. 22, 21-26. |
30 | Dobrindt, U., and Hacker, J. (2001). Whole genome plasticity in pathogenic bacteria. Curr. Opin. Microbiol. 4, 550-557. DOI |
31 | Eldar, A., Bejerano, Y., Livoff, A., Horovitcz, A., and Bercovier, H. (1995). Experimental streptococcal meningo-encephalitis in cultured fish. Vet. Microbiol. 43, 33-40. DOI |
32 | Eyngor, M., Zlotkin, A., Ghittino, C., Prearo, M., Douet, D.-G., Chilmonczyk, S., and Eldar, A. (2004). Clonality and diversity of the fish pathogen Lactococcus garvieae in Mediterranean countries. Appl. Environ. Microbiol. 70, 5132-5137. DOI |
33 | Facklam, R., Elliott, J., Shewmaker, L., and Reingold, A. (2005). Identification and characterization of sporadic isolates of Streptococcus iniae isolated from humans. J. Clin. Microbiol. 43, 933-937. DOI |
34 | Ravelo, C., Magarinos, B., Romalde, J.L., and Toranzo, A.E. (2001). Conventional versus miniaturized systems for the phenotypic characterization of Lactococcus garvieae strains. Bull. Eur. Ass. Fish Pathol. 21, 136-144. |
35 | Park, Y.K., Nho, S.W., Shin, G.W., Park, S.B., Jang, H.B., Cha, I.S., Ha, M.A., Kim, Y.R., Dalvi, R.S., Kang, B.J., et al. (2009). Antibiotic susceptibility and resistance of Streptococcus iniae and Streptococcus parauberis isolated from olive flounder (Paralichthys olivaceus). Vet. Microbiol. 136, 76-81. DOI |
36 | Pereira, U., Mian, G., Oliveira, I., Benchetrit, L., Costa, G., and Figueiredo, H. (2010). Genotyping of Streptococcus agalactiae strains isolated from fish, human and cattle and their virulence potential in Nile tilapia. Vet. Microbiol. 140, 186-192. DOI |
37 | Rajagopal L. (2009). Understanding the regulation of Group B Streptococcal virulence factors. Future Microbiol. 4, 201-221. DOI |
38 | Ruiz-Zarzuela, I., de Bias, I., Girones, O., Ghittino, C., and Muazquiz, J. (2005). Isolation of Vagococcus salmoninarum in rainbow trout, Oncorhynchus mykiss (Walbaum), broodstocks: characterization of the pathogen. Vet. Res. Commun. 29, 553-562. DOI |
39 | Sakai, M. (1999). Current research status of fish immunostimulants. Aquaculture. 172, 63-92. DOI |
40 | Sakala, R., Hayashidani, H., Kato, Y., Kaneuchi, C., and Ogawa, M. (2002). Isolation and characterization of Lactococcus piscium strains from vacuum-packaged refrigerated beef. J. Appl. Microbiol. 92, 173-179. DOI |
41 | Shoemaker, C.A., Evans, J.J., and Klesius, P.H. (2000). Density and dose: factors affecting mortality of Streptococcusiniae infected tilapia (Oreochromisniloticus). Aquaculture 188, 229-235. DOI |
42 | Hastein, T., Gudding, R., and Evensen, O. (2005). Bacterial vaccines for fish--an update of the current situation worldwide. Dev. Biol. (Basel). 121, 55-74. |
43 | Fuller, J.D., Bast, D.J., Nizet, V., Low, D.E., and de Azavedo, J.C. (2001). Streptococcus iniae virulence is associated with a distinct genetic profile. Infect. Immun. 69, 1994-2000. DOI |
44 | Gao, X.Y., Zhi, X.Y., Li, H.W., Klenk, H.P., and Li, WJ.. (2014). Comparative genomics of the bacterial genus Streptococcus illuminates evolutionary implications of species groups. PLoS One. 9, e101229 DOI |
45 | Ghittino, C., Accornero, P., Prearo, M., Rogato, F., Zlotkin, A., and Eldar, A. (1999). Coldwater streptococcoses in salmonids, with particular reference to Vagococcus salmoninarum infection, Proceedings of Workshop in Fish Streptococcoses, IZS-State Veterinary Institute, Turin, Italy. |
46 | Holmer, M. (2010). Environmental issues of fish farming in offshore waters: perspectives, concerns and research needs. Aquac. Environ. Interact. 1, 57-70. DOI |
47 | Johri, A.K., Paoletti, L.C., Glaser, P., Dua, M., Sharma, P.K., Grandi, G., and Rappuoli, R. (2006). Group B Streptococcus: global incidence and vaccine development. Nat. Rev. Microbiol. 4, 932-942. DOI |
48 | Jolley, K.A., Bliss, C.M., Bennett, J.S., Bratcher, H.B., Brehony, C., Colles, F.M., Wimalarathna, H., Harrison, O.B., Sheppard, S.K., Cody, A.J., et al. (2012). Ribosomal multilocus sequence typing: universal characterization of bacteria from domain to strain. Microbiology 158, 1005-1015. DOI |
49 | Klesius, P., Evans, J., Shoemaker, C., Yeh, H., Goodwin, A., Adams, A., and Thompson, K. (2006). Rapid detection and identification of Streptococcus iniae using a monoclonal antibody-based indirect fluorescent antibody technique. Aquaculture 258, 180-186. DOI |
50 | Shoemaker, C.A., Klesius, P.H., and Evans, J.J. (2001). Prevalence of Streptococcus iniae in tilapia, hybrid striped bass, and channel catfish on commercial fish farms in the United States. Am. J. Vet. Res. 62, 174-177. DOI |
51 | Sommerset, I., Krossoy, B., Biering, E., and Frost, P. (2005). Vaccines for fish in aquaculture. Exp. Rev. Vaccines. 4, 89-101. DOI |
52 | Springman, A.C., Lacher, D.W., Wu, G., Milton, N., Whittam, T.S., Davies, H.D., and Manning S.D. (2009). Selection, Recombination, and Virulence gene diversity among Group b Streptococcal Genotypes. J. Bacteriol. 17, 5419-5427. |
53 | Teng, L.J., Hsueh, P.R., Tsai, J.C., Chen, P.W., Hsu, J.C., Lai, H.C., Lee, C.N., and Ho, S.W. (2002). groESL sequence determination, phylogenetic analysis, and species differentiation for viridans group streptococci. J. Clin. Microbiol. 40, 3172-3178. DOI |
54 | Toranzo, A.E., Magarinos, B., and Romalde, J.L. (2005). A review of the main bacterial fish diseases in mariculture systems. Aquaculture 246, 37-61. DOI |
55 | Achtman, M. (2008). Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens. Annu. Rev. Microbiol. 62, 53-70. DOI |
56 | Tung, S.K., Teng, L.J., Vaneechoutte, M., Chen, H.M., and Chang, T.C. (2007) Identification of species of Abiotrophia, Enterococcus, Granulicatella and Streptococcus by sequence analysis of the ribosomal 16S-23S intergenic spacer region J. Med. Microbiol. 56, 504-513 DOI |
57 | Vendrell, D., Balcazar, J.L., Ruiz-Zarzuela, I., De Blas, I., Girones, O., Muzquiz, J.L. (2006). Lactococcus garvieae in fish: a review. Comp. Immunol. Microbiol. Infect. Dis. 29, 177-198. DOI |
58 | Villegas, J.G., Fukada, H., Masumoto, T., and Hosokawa, H. (2006). Effect of Dietary Immunostimulants on Some Innate Immune Responses and Disease Resistance against Edwardsiella tarda Infection in Japanese Flounder (Paralichthys olivaceus). Aquaculture Science 2, 153-162. |
59 | Abdelsalam, M., Chen, S.-C., and Yoshida, T. (2010). Dissemination of streptococcal pyrogenic exotoxin G (spegg) with an IS-like element in fish isolates of Streptococcus dysgalactiae. FEMS Microbiol. Lett. 309, 105-113. |
60 | Abdelsalam, M., Asheg, A., and Eissa, A.E. (2013). Streptococcus dysgalactiae: An emerging pathogen of fishes and mammals. Int. J. Vet. Sci. Med. 1, 1-6. DOI |
61 | Agnew, W., and Barnes, A.C. (2007). Streptococcus iniae: an aquatic pathogen of global veterinary significance and a challenging candidate for reliable vaccination. Vet. Microbiol. 122, 1-15. DOI |
62 | Al-Harbi, A.H. (2011). Molecular characterization of Streptococcus iniae isolated from hybrid tilapia (Oreochromis Oreochromis aureus). Aquaculture 312, 15-18. DOI |
63 | Aguilera, S.E., Cole, J., Finkbeiner, E.M., Cornu, E.L., Ban, N.C., Carr, M.H., Cinner, J.E., Crowder, L.B., Gelcich, S., Hicks, C.C., et al. (2015). Managing small-scale commercial fisheries for adaptive capacity: insights from dynamic social-ecological drivers of change in monterey bay. PLoS One 10, e0118992. DOI |
64 | Lowe B.A., Miller J.D., and Neely M.N. (2007). Analysis of the polysaccharide capsule of the systemic pathogen Streptococcus iniae and its implications in virulence. Infect. Immun. 75, 1255-1264. DOI |
65 | Klijn, N., Weerkamp, A.H., and de Vos, W.M. (1991). Identification of mesophilic lactic acid bacteria by using polymerase chain reaction-amplified variable regions of 16S rRNA and specific DNA probes. Appl. Environ. Microbiol. 57, 3390-3393. |
66 | Lau, S.K., Woo, P.C., Luk, W.K., Fung, A.M., Hui, W.T., Fong, A.H., Chow, C.W., Wong, S.S., and Yuen, K.Y. (2006). Clinical isolates of Streptococcus iniae from Asia are more mucoid and beta-hemolytic than those from North America. Diagn. Microbiol. Infect. Dis. 54, 177-181. DOI |
67 | Li, L., Wang, R., Liang, W., Huang, T., Huang, Y., Luo, F., Lei, A., Chen, M., and Gan, X. (2015). Development of live attenuated Streptococcus agalactiae vaccine for tilapia via continuous passage in vitro. Fish Shellfish Immunol. 45, 955-963. DOI |
68 | Magnadottir, B. (2006). Innate immunity of fish (overview). Fish Shellfish Immunol. 20, 137-151. DOI |
69 | Maiden, M.C. (2006). Multilocus sequence typing of bacteria. Annu. Rev. Microbiol. 60, 561-588. DOI |
70 | Medini, D., Serruto, D., Parkhill, J., Relman, D.A., Donati, C., Moxon, R., Falkow, S., Rappuoli, R. (2008). Microbiology in the post-genomic era. Nat. Rev. Microbiol. 6, 419-430. DOI |
71 | Mishra, A., Nam, G.H., Gim, J.A., Seong, M., Choe, Y., Lee, H.E., Jo, A., Kim, S., Kim, D.H., Cha, H.J., et al. (2017). Comparative evaluation of 16S rRNA gene in world-wide strains of Streptococcus iniae and Streptococcus parauberis for early diagnostic marker. Genes Genom. 39 , 779-791. DOI |
72 | Yoon, S.H., Ha, S.M., Kwon, S., Lim, J., Kim, Y., Seo, H., and Chun, J. (2017). Introducing EzBioCloud: A taxonomically united database of 16S rRNA and whole genome assemblies. Int. J. Syst. Evol. Microbiol. 67, 1613-1617 DOI |
73 | Weinstein, M.R., Litt, M., Kertesz, D.A., Wyper, P., Rose, D., Coulter, M., McGeer, A., Facklam, R., Ostach, C., Willey, B.M., et al. (1997). Invasive infections due to a fish pathogen, Streptococcus iniae. S. iniae Study Group. N. Engl. J. Med. 337, 589-594. DOI |
74 | Woo, S.H., and Park, S.I. (2014). Effects of phosphoglucomutase gene (PGM) in Streptococcus parauberis on innate immune response and pathogenicity of olive flounder (Paralichthys olivaceus). Fish Shellfish Immunol. 41, 317-325. DOI |
75 | Wren, B.W. (2000). Microbial genome analysis: insights into virulence, host adaptation and evolution. Nat. Rev. Genet. 1, 30-39. DOI |
76 | Zlotkin, A., Chilmonczyk, S., Eyngor, M., Hurvitz, A., Ghittino, C., and Eldar, A. (2003). Trojan horse effect: phagocyte-mediated Streptococcus iniae infection of fish. Infect. Immun. 71, 2318-2325. DOI |