A Long Non-Coding RNA snaR Contributes to 5-Fluorouracil Resistance in Human Colon Cancer Cells |
Lee, Heejin
(Department of Biochemistry, College of Medicine, Catholic University of Korea)
Kim, Chongtae (Department of Biochemistry, College of Medicine, Catholic University of Korea) Ku, Ja-Lok (Cancer Research Institute and Cancer Research Center, Seoul National University) Kim, Wook (Department of Molecular Science and Technology, Ajou University) Kim Yoon, Sungjoo (Cancer Evolution Research Center, College of Medicine, Catholic University of Korea) Kuh, Hyo-Jeong (Cancer Evolution Research Center, College of Medicine, Catholic University of Korea) Lee, Jeong-Hwa (Department of Biochemistry, College of Medicine, Catholic University of Korea) Nam, Suk Woo (Cancer Evolution Research Center, College of Medicine, Catholic University of Korea) Lee, Eun Kyung (Department of Biochemistry, College of Medicine, Catholic University of Korea) |
1 | Shin, YK, Yoo, BC, Hong, YS, Chang, HJ, Jung, KH, Jeong, SY, and Park, JG (2009). Upregulation of glycolytic enzymes in proteins secreted from human colon cancer cells with 5-fluorouracil resistance. Electrophoresis. 30, 2182-2192. DOI ScienceOn |
2 | Strathdee, G (2007). Epigenetic markers and response to chemotherapy in cancer. Dis Markers. 23, 43-49. DOI |
3 | Mariadason, JM, Arango, D, Shi, Q, Wilson, AJ, Corner, GA, Nicholas, C, Aranes, MJ, Lesser, M, Schwartz, EL, and Augenlicht, LH (2003). Gene expression profiling-based prediction of response of colon carcinoma cells to 5-fluorouracil and camptothecin. Cancer Res. 63, 8791-8812. |
4 | Mercer, TR, Dinger, ME, and Mattick, JS (2009). Long non-coding RNAs: insights into functions. Nat Rev Genet. 10, 155-159. DOI ScienceOn |
5 | Mishra, PJ (2012). The miRNA-drug resistance connection: a new era of personalized medicine using noncoding RNA begins. Pharmacogenomics. 13, 1321-1324. DOI ScienceOn |
6 | Mishra, PJ, and Bertino, JR (2009). MicroRNA polymorphisms: the future of pharmacogenomics, molecular epidemiology and individualized medicine. Pharmacogenomics. 10, 399-416. DOI ScienceOn |
7 | Ooyama, A, Takechi, T, Toda, E, Nagase, H, Okayama, Y, Kitazato, K, Sugimoto, Y, Oka, T, and Fukushima, M (2006). Gene expression analysis using human cancer xenografts to identify novel predictive marker genes for the efficacy of 5-fluorouracil-based drugs. Cancer Sci. 97, 510-522. DOI ScienceOn |
8 | Park, JG, Oie, HK, Sugarbaker, PH, Henslee, JG, Chen, TR, Johnson, BE, and Gazdar, A (1987). Characteristics of cell lines established from human colorectal carcinoma. Cancer Res. 47, 6710-6718. |
9 | Parrott, AM, and Mathews, MB (2007). Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. Nucleic Acids Res. 35, 6249-6258. DOI ScienceOn |
10 | Xu, X, Chen, H, Lin, Y, Hu, Z, Mao, Y, Wu, J, Xu, X, Zhu, Y, Li, S, and Zheng, X (2013). MicroRNA-409-3p inhibits migration and invasion of bladder cancer cells via targeting c-Met. Mol Cells. 36, 62-68. DOI |
11 | Zhang, N, Yin, Y, Xu, SJ, and Chen, WS (2008). 5-Fluorouracil: mechanisms of resistance and reversal strategies. Molecules. 13, 1551-1569. DOI ScienceOn |
12 | Zheng, T, Wang, J, Chen, X, and Liu, L (2010). Role of micro-RNA in anticancer drug resistance. Int J Cancer. 126, 2-10. DOI ScienceOn |
13 | Parrott, AM, Tsai, M, Batchu, P, Ryan, K, Ozer, HL, Tian, B, and Mathews, MB (2011). The evolution and expression of the snaR family of small non-coding RNAs. Nucleic Acids Res. 39, 1485-1500. DOI ScienceOn |
14 | Peters, GJ, Backus, HH, Freemantle, S, van Triest, B, Codacci-Pisanelli, G, van der Wilt, CL, Smid, K, Lunec, J, Calvert, AH, and Marsh, S (2002). Induction of thymidylate synthase as a 5-fluorouracil resistance mechanism. Biochim Biophys Acta. 1587, 194-205. DOI ScienceOn |
15 | Raguz, S, and Yague, E (2008). Resistance to chemotherapy: new treatments and novel insights into an old problem. Br J Cancer. 99, 387-391. DOI ScienceOn |
16 | Ganguly, A, Banerjee, K, Chakraborty, P, Das, S, Sarkar, A, Hazra, A, Banerjee, M, Maity, A, Chatterjee, M, and Mondal, NB (2011). Overcoming multidrug resistance (MDR) in cancer in virto and in vivo by a quinoline derivative. Biomed Pharmacother. 65, 387-394. DOI ScienceOn |
17 | Roberti, A, La Sala, D, and Cinti, C (2006). Multiple genetic and epigenetic interacting mechanisms contribute to clonally selection of drug-resistant tumors: current views and new therapeutic prospective. J Cell Physiol. 207, 571-581. DOI ScienceOn |
18 | Rukov, JL, and Shomron, N (2011). MicroRNA pharmacogenomics: post-transcriptional regulation of drug response. Trends Mol Med. 17, 412-423. DOI ScienceOn |
19 | Shin, YK, Yoo, BC, Chang, HJ, Jeon, E, Hong, SH, Jung, MS, Lim, SJ, and Park, JG (2005). Down-regulation of mitochondrial F1F0-ATP synthase in human colon cancer cells with induced 5-fluorouracil resistance. Cancer Res. 65, 3162-3170. |
20 | Gibb, EA, Brown, CJ, and Lam, WL (2011). The functional role of long non-coding RNA in human carcinomas. Mol Cancer. 10, 38. DOI ScienceOn |
21 | Glasspool, RM, Teodoridis, JM, and Brown, R (2006). Epigenetics as a mechanism driving polygenic clinical drug resistance. Br J Cancer. 94, 1087-1092. DOI ScienceOn |
22 | Batista, PJ, and Chang, HY (2013). Long noncoding RNAs: cellular address codes in development and disease. Cell. 152, 1298-1307. DOI ScienceOn |
23 | Taft, RJ, Pang, KC, Mercer, TR, Dinger, M, and Mattick, JS (2010). Non-coding RNAs: regulators of disease. J Pathol. 220, 126-139. DOI ScienceOn |
24 | Whitehead, J, Pandey, GK, and Kanduri, C (2009). Regulation of the mammalian epigenome by long noncoding RNAs. Biochim Biophys Acta. 1790, 936-947. DOI ScienceOn |
25 | Tan, DS, Gerlinger, M, Teh, BT, and Swanton, C (2010). Anticancer drug resistance: understanding the mechanisms through the use of integrative genomics and functional RNA interference. Eur J Cancer. 46, 2166-2177. DOI ScienceOn |
26 | Wang, KC, and Chang, HY (2011). Molecular mechanisms of long noncoding RNAs. Mol Cell. 43, 904-914. DOI ScienceOn |
27 | Wang, Z, Li, Y, Ahmad, A, Azmi, AS, Kong, D, Banerjee, S, and Sarkar, FH (2010). Targeting miRNAs involved in cancer stem cell and EMT regulation: an emerging concept in overcoming drug resistance. Drug Resist Updat. 13, 109-118. DOI ScienceOn |
28 | Wilusz, JE, Sunwoo, H, and Spector, DL (2009). Long noncoding RNAs: functional surprises from the RNA world. Genes Dev. 23, 1494-1504. DOI ScienceOn |
29 | Kurokawa, K, Tanahashi, T, Iima, T, Yamamoto, Y, Akaike, Y, Nishida, K, Masuda, K, Kuwano, Y, Murakami, Y, and Fukushima, M (2012). Role of miR-19b and its target mRNAs in 5-fluorouracil resistance in colon cancer cells. J Gastroenterol. 47, 883-895. DOI ScienceOn |
30 | Liu, Z, Sun, M, Lu, K, Liu, J, Zhang, M, Wu, W, De, W, Wang, Z, and Wang, R (2013). The long noncoding RNA HOTAIR contributes to cisplatin resistance of human lung adenocarcinoma cells via downregualtion of p21(WAF1/CIP1) expression. PLoS One. 8, e77293. DOI |
31 | Ma, J, Dong, C, and Ji, C (2010). MicroRNA and drug resistance. Cancer Gene Ther. 17, 523-531. DOI ScienceOn |
32 | Fatica, A, and Bozzoni, I (2013). Long non-coding RNAs: new players in cell differentiation and development. Nat Rev Genet. 15, 7-21. DOI |
33 | Choi, CH, Lee, TB, Lee, YA, Choi, S, and Kim, KJ (2011). Upregulation of cyclooxygenase-2-derived prostaglandin E(2) in colon cancer cells resistant to 5-fluorouracil. J Korean Surg Soc. 81, 115-121. DOI ScienceOn |
34 | Djebali, S, Davis, CA, Merkel, A, Dobin, A, Lassmann, T, Mortazavi, A, Tanzer, A, Lagarde, J, Lin, W, and Schlesinger, F (2012). Landscape of transcription in human cells. Nature. 489, 101-108. DOI ScienceOn |
35 | Esteller, M (2011). Non-coding RNAs in human disease. Nat Rev Genet. 12, 861-874. DOI ScienceOn |
36 | Fojo, T (2007). Multiple paths to a drug resistance phenotype: mutations, translocations, deletions and amplification of coding genes or promoter regions, epigenetic changes and microRNAs. Drug Resist Updat. 10, 59-67. DOI ScienceOn |
37 | Fulda, S, Susin, SA, Kroemer, G, and Debatin, KM (1998). Molecular ordering of apoptosis induced by anticancer drugs in neuroblastoma cells. Cancer Res. 58, 4453-4460. |
38 | International Multicentre Pooled Analysis of Colon Cancer Trials (IMPACT) investigators (1995). Efficacy of adjuvant fluorouracil and folinic acid in colon cancer. Lancet. 345, 939-944. DOI ScienceOn |
39 | Gottesman, MM (2002). Mechanisms of cancer drug resistance. Ann Rev Med. 53, 615-627. DOI ScienceOn |
40 | Grem, JL (2000). 5-Fluorouracil: forty-plus and still ticking. A review of its preclinical and clinical development. Invest New Drugs. 18, 299-313. DOI ScienceOn |
41 | Jung, GR, Kim, KJ, Choi, CH, Lee, TB, Han, SI, Han, HK, and Lim, SC (2007). Effect of betulinic acid on anticancer drug-resistant colon cancer cells. Basic Clin Pharmacol Toxicol. 101, 277-285. DOI ScienceOn |
42 | Kang, H, Kim, C, Lee, H, Kim, W, and Lee, EK (2013). Post-transcriptional controls by ribonucleoprotein complexes in the acquisition of drug resistance. Int J Mol Sci. 14, 17204-17220. DOI ScienceOn |
43 | Boyer, J, Allen, WL, McLean, EG, Wilson, PM, McCulla, A, Moore, S, Longley, DB, Caldas, C, and Johnston, PG (2006). Pharmacogenomic identification of novel determinants of response to chemotherapy in colon cancer. Cancer Res. 66, 2765-2777. DOI ScienceOn |
44 | Parrott, AM, and Mathews, MB (2009). snaR genes: recent descendants of Alu involved in the evolution of chorionic gonadotropins. Cold Spring Harbor Symp Quant Biol. 74, 363-373. DOI |
45 | Rinn, JL, and Chang, HY (2012). Genome regulation by long noncoding RNAs. Ann Rev Biochem. 81, 145-166. DOI ScienceOn |
46 | Fan, Y, Shen, B, Tan, M, Mu, X, Qin, Y, Zhang, F, and Liu, Y (2014). Long non-coding RNA UCA1 increases chemoresistances of bladder cancer cells by regulating Wnt signaling. FEBS J. 281, 1750-1758. DOI ScienceOn |
47 | Karasawa, H, Miura, K, Fujibuchi, W, Ishida, K, Kaneko, N, Kinouchi, M, Okabe, M, Ando, T, Murata, Y, and Sasaki, H (2009). Down-regulation of cIAP2 enhances 5-FU sensitivity through the apoptotic pathway in human colon cancer cells. Cancer Sci. 100, 903-913. DOI ScienceOn |
48 | Oh, JH, Ku, JL, Yoon, KA, Kwon, HJ, Kim, WH, Park, HS, Yeo, KS, Song, SY, Chung, JK, and Park, JG (1999). Establishment and characterization of 12 human colorectal-carcinoma cell lines. International journal of cancer. J Int Cancer. 81, 902-910. DOI ScienceOn |