Browse > Article

The Efficiency of RNA Interference in Bursaphelenchus xylophilus  

Park, Jung-Eun (Department of Biochemistry, College of Science, Yonsei University)
Lee, Kyong Yun (Department of Biochemistry, College of Science, Yonsei University)
Lee, Se-Jin (Department of Biochemistry, College of Science, Yonsei University)
Oh, Wan-Suk (Department of Biochemistry, College of Science, Yonsei University)
Jeong, Pan-Young (Department of Biochemistry, College of Science, Yonsei University)
Woo, Taeha (Korean Bioinformation Center, Korea Research Institute of Bioscience and Biotechnology)
Kim, Chang-Bae (Korean Bioinformation Center, Korea Research Institute of Bioscience and Biotechnology)
Paik, Young-Ki (Department of Biochemistry, College of Science, Yonsei University)
Koo, Hyeon-Sook (Department of Biochemistry, College of Science, Yonsei University)
Abstract
RNA interference (RNAi) was performed on several essential genes in the pinewood nematode Bursaphelenchus xylophilus, which causes pine wilt disease. Double-stranded RNA (dsRNA) was delivered to larvae or adult worms by soaking, electroporation, or microinjection. Soaking and electroporation of L2-L3 stage worms in solutions containing dsRNA for essential genes induced over 25% lethality after 5 days, and gene-specific phenotypes were observed. This lethality agreed with significant reductions of the targeted transcripts, as assayed by reverse-transcription coupled with real time PCR. Microinjection was the most efficient route as measured by the hatching rate of F1 embryos, which was reduced by 46%. When adult worms were soaked in dsRNA, lethality was induced in the F1 larvae, revealing the persistence of knockdown phenotypes. The penetrance of the RNAi phenotypes for essential genes was relatively low but consistent, indicating that RNAi should be useful for studying the in vivo functions of B. xylophilus gene products.
Keywords
cytochrome C; heat shock protein 70; myosin heavy chain; pinewood nematode; RNAi; tropomyosin;
Citations & Related Records
Times Cited By KSCI : 1  (Citation Analysis)
Times Cited By Web Of Science : 10  (Related Records In Web of Science)
연도 인용수 순위
1 Bakhetia, M., Charlton, W., Atkinson, H.J., and McPherson, M.J. (2005). RNA interference of dual oxidase in the plant nematode Meloidogyne incognita. Mol. Plant Microbe Interact. 18, 1099- 1106   DOI   ScienceOn
2 Dwinell, L.D. (1997). The pinewood nematode: regulation and mitigation. Annu. Rev. Phytopathol. 35, 153-166   DOI   ScienceOn
3 Issa, Z., Grant, W.N., Stasiuk, S., and Shoemaker, C.B. (2005). Development of methods for RNA interference in the sheep gastrointestinal parasite, Trichostrongylus colubriformis. Int. J. Parasitol. 35, 935-940   DOI   ScienceOn
4 Kawai, M., Shoda-Kagaya, E., Maehara, T., Zhou, Z.H., Lian, C.L., Iwata, R., Yamane, A., and Hogetsu, T. (2006). Genetic structure of pine sawyer Monochamus alternatus (coleoptera: Cerambycidae) populations in northeast Asia: consequences of the spread of pine wilt disease. Environ. Entomol. 35, 569-579   DOI   ScienceOn
5 Kikuchi, T., Shibuya, H., Aikawa, T., and Jones, J.T. (2006). Cloning and characterization of pectate lyases expressed in the esophageal gland of the pine wood nematode Bursaphrlenchus xylophilus. Mol. Plant Microbe Interact. 19, 280-287   DOI   ScienceOn
6 Kikuchi, T.I Aikawa, T., Kosaka, H., Pritchard, L., Ogura, N., and Jones, J.T. (2007). Expressed sequence tag (EST) analysis of the pine wood nematode Bursaphrlenchus xylophilus. Mol. Biochem. Parasitol. 155, 9-17   DOI
7 Lilley, C.J., Bakhetia, M., Charlton, W.L., and Urwin, P.E. (2007). Recent progress in the development of RNA interference for plant parasitic nematodes. Mol. Plant Pathol. 8, 701-711   DOI   ScienceOn
8 Lustigman, S., Zhang, J., Liu, J., Oksov, Y., and Hashmi, S. (2004). RNA interference targeting cathepsin L and Z-like cysteine proteases of Onchocerca volvolus confirmed their essential function during L3 molting. Mol. Biochem. Parasitol. 138, 165-170   DOI   ScienceOn
9 Takai, K., Soejima, T., Suzuki, T., and Kawazu, K. (2001). Development of a water-soluble preparation of emamectin benzoate and its preventative effect against the wilting of pot-grown pine trees inoculated with the pine wood nematode, Bursaphrlenchus xylophilus. Pest Manag. Sci. 57, 463-466   DOI   ScienceOn
10 Takai, K., Suzuki, T., and Kawazu, K. (2003). Distribution and persistence of emamectin benzoate at efficacious concentrations in pine tissues after injection of a liquid formulation. Pest. Manag. Sci. 60, 42-48   DOI   ScienceOn
11 Zheng, J.W., Subbotin, S.A., He, S.S., Gu, J.F., and Moens, M. (2003). Molecular characterization of some Asian isolates of Bursaphelenchus xylophilus and B-mucronatus using PCRRFLPs and sequences of ribosomal DNA. Russian J. Nematol. 11, 17-22
12 Yates, D.M., Portillo, V., and Wolstenholme, A.J. (2003). The avermectin receptors of Haemonchus contortus and Caenorhabditis elegans. Int. J. Parasitol. 33, 1183-1193   DOI   ScienceOn
13 Kikuchi, T., Shibuya, H., and Jones, J.T. (2005). Molecular and biochemical characterization of an endo-$\beta$-1,3-glucanase from the pinewood nematode Bursaphrlenchus xylophilus acquired by horizontal gene transfer from bacteria. Biochem. J. 389, 117- 125   DOI   ScienceOn
14 Kiyohara, T., and Tokushige, Y. (1971). Inoculation experiments of a nematode, Bursaphrlenchus sp., onto pine trees. J. Jpn. Forest. Soci. 53, 210-218
15 Jeong, Y.S., Kang, Y.l., Lim, K.H., Lee, M.H., Lee, J., and Koo, H.-S. (2003). Deficiency of Caenorhabditis elegans homologue reduces life span and increases sensitivity to ionizing radiation. DNA Repair 2, 1309-1319   DOI   ScienceOn
16 Rosso, M.-N., Dubrana, M.P., Cimbolini, N., Jaubert, S., and Abad, P. (2005). Application of RNA interference to root-knot nematode genes encoding esophageal gland proteins. Mol. Plant Microbe Interact. 18, 615-620   DOI   ScienceOn
17 Huang, G., Allen, R., Davis, E.L., Baum, T.J., and Hussey, R.S. (2006). Engineering broad root-knot resistance in transgenic plants by RNAi silencing of a conserved and essential root-knot nematode parasitism gene. Proc. Natl. Acad. Sci. USA 103, 14302-14306
18 Hasegawa, K., Futai, K., Miwa, S., and Miwa, J. (2004). Early embryogenesis of the pinewood nematode Bursaphrlenchus xylophilus . Dev. Growth Differ. 46, 153-161   DOI   ScienceOn
19 Krautz-Peterson, G., Radwanska, M., Ndegwa, D., Shoemaker, C.B., and Skelly, P.J. (2007). Optimizing gene suppression in schistosomes using RNA interference. Mol. Biochem. Parasitol. 153, 194-202   DOI   ScienceOn
20 Rual, J.-F., Klitgord, N., and Achaz, G. (2007). Novel insights into RNAi off-target effects using C. elegans. BMC Genomics 8, 106   DOI
21 Park, I.K., Park, J.Y., Kim, K.H., Choi, K.S., Choi, I.H., Kim, C.S., and Shin, S.C. (2005). Nematicidal activity of plant essential oils and components from garlic (Allium sativum) and cinnamon (Cinnamomum verum) oils against the pine wood nematode (Bursaphrlenchus xylophilus). Nematology 7, 767-774   DOI   ScienceOn
22 Parrish, S., Fleenor, J., Xu, S., Mello, C., and Fire, A. (2000). Functional anatomy of a dsRNA trigger: differential requirement for the two trigger strands in RNA interference. Mol. Cell 6, 1077- 1087   DOI   ScienceOn
23 Kwon, T.S., Song, M.Y., Shin, S.C., and Park, Y.S. (2005). Effects of aerial insecticide sprays on ant communities to control pine wilt disease in Korean pine forests. Appl. Entomol. Zool. 40, 563-574   DOI   ScienceOn
24 Aboobaker A.A., and Blaxter, M.L. (2003). Use of RNA interference to investigate gene function in the human filarial nematode parasite Brugia malayi. Mol. Biochem. Parasitol. 129, 41-51   DOI   ScienceOn
25 Kikuchi, T., Jones, J.T., Aikawa, T., Kosaka, H., and Ogura, N. (2004). A family of glycosyl hydrolase family 45 cellulases from the pine wood nematode Bursaphrlenchus xylophilus. FEBS Lett. 572, 201-205   DOI   ScienceOn
26 Mota, M.M., Braasch, H., Bravo, M.A., Penas, A.C., Burgermeister, W., Metge, K., and Sousa, E. (1999). First report of Bursaphrlenchus xylophilus in Portugal and in Europe. Nematology 1, 727-734   DOI
27 Geldhof, P., Murray, L., Couthier, A., Gilleard, J. S., McLauchlan, G., and Knox, D.P., and Britton, C. (2006). Testing the efficacy of RNA interference in Haemonchus contortus. Int. J. Parasitol. 36, 801-810   DOI   ScienceOn
28 Chen, Q., Rehman, S., Smant, G., and Jones, J.T. (2005). Functional analysis of pathogenicity proteins of the potato cyst nematode Globodera rostochiensis using RNAi. Mol. Plant Microbe Interact. 18, 621-625   DOI   ScienceOn
29 Kim, V.N. (2005). Small RNAs: classification, biogenesis, and function. Mol. Cells 19, 1-15   DOI   ScienceOn
30 Knox, D.P., Geldhof, P., Visser, A., and Britton, C. (2007). RNA interference in parasitic nematodes of animals: a reality check? Trends Parasitol. 23, 105-107   DOI   ScienceOn
31 Yi, C.K., Byun, B.H., Park, J.D., Yang, S.I., and Chang, K.H. (1989). First finding of the pine wood nematode, Bursaphrlenchus xylophilus(Steiner et Buhrer) Nickle and its insect vector in Korea. Res. Rep. For. Res. Inst. 38, 141-149
32 Timmons, L., and Fire, A. (1998). Specific interference by ingested dsRNA. Nature 395, 854   DOI   ScienceOn
33 Parrish, J.Z., Yang, C., Shen, B., and Xue, D. (2003). CRN-1, a Caenorhabditis elegans FEN-1 homologue, cooperates with CPS-6/EndoG to promote apoptotic DNA degradation. EMBO J. 22, 3451-3460   DOI   ScienceOn
34 Sugimoto, A. (2004). High-throughput RNAa in Caenorhabditis elegans : genome-wide screens and functional genomics. Differentiation 72, 81-91   DOI   ScienceOn
35 Urwin, P.E., Lilley, C.J., and Atkinson, H.J. (2002). Ingestion of double-stranded RNA by preparasitic juvenile cyst nematodes leads to RNA interference. Mol. Plant Microbe Interact. 15, 747- 752   DOI   ScienceOn
36 Yadav, B.C., Veluthambi, K., and Subramaniam, K. (2006). Hostgenerated double stranded RNA induces RNAi in plant-parasitic nematodes and protects the host from infection. Mol. Biochem. Parasitol. 148, 219-222   DOI   ScienceOn
37 Islam, M.K., Miyoshi, T., Yamada, M., and Tsuji, N. (2005). Pyrophosphatase of the roundworm Ascaris suum plays an essential role in the worm's molting and development. Infect. Immun. 73, 1995-2004   DOI   ScienceOn