Polyadenylation Is Dispensable for Encapsidation and Reverse Transcription of Hepatitis B viral Pregenomic RNA |
Lee, Hye-Jin
(Department of Biochemistry, Yonsei University)
Lee, Jehan (Department of Biochemistry, Yonsei University) Shin, Myeong-Kyun (Department of Biochemistry, Yonsei University) Ryu, Wang-Shick (Department of Biochemistry, Yonsei University) |
1 | Abraham, T.M., and Loeb, D.D. (2006). Base pairing between the 5′ half of epsilon and a cis-acting sequence, phi, makes a contribution to the synthesis of minus-strand DNA for human hepatitis B virus. J. Virol. 80, 4380-4387 DOI ScienceOn |
2 | Allen, M.I., Deslauriers, M., Andrews, C.W., Tipples, G.A., Walters, K.A., Tyrrell, D.L., Brown, N., and Condreay, L.D. (1998). Identification and characterization of mutations in hepatitis B virus resistant to lamivudine. Lamivudine Clinical Investigation Group. Hepatology 27, 1670-1677 DOI ScienceOn |
3 | Bartenschlager, R., and Schaller, H. (1992). Hepadnaviral assembly is initiated by polymerase binding to the encapsidation signal in the viral RNA genome. EMBO. J. 11, 3413-3420 |
4 | Galibert, F., Mandart, E., Fitoussi, F., Tiollais, P., and Charnay, P. (1979). Nucleotide sequence of the hepatitis B virus genome (subtype ayw) cloned in E. coli. Nature 281, 646-650 DOI ScienceOn |
5 | Havert, M.B., and Loeb, D.D. (1997). cis-Acting sequences in addition to donor and acceptor sites are required for template switching during synthesis of plus-strand DNA for duck hepatitis B virus. J. Virol. 71, 5336-5344 |
6 | Junker-Niepmann, M., Bartenschlager, R., and Schaller, H. (1990). A short cis-acting sequence is required for hepatitis B virus pregenome encapsidation and sufficient for packaging of foreign RNA. EMBO J. 9, 3389-3396 |
7 | Pattnaik, A.K., Ball, L.A., LeGrone, A.W., and Wertz, G.W. (1992). Infectious defective interfering particles of VSV from transcripts of a cDNA clone. Cell 69, 1011-1020 DOI ScienceOn |
8 | Perrotta, A.T., and Been, M.D. (1996). Core sequences and a cleavage site wobble pair required for HDV antigenomic ribozyme self-cleavage. Nucleic Acids Res. 24, 1314-1321 DOI |
9 | Sharmeen, L., Kuo, M.Y., Dinter-Gottlieb, G., and Taylor, J. (1988). Antigenomic RNA of human hepatitis delta virus can undergo self-cleavage. J. Virol. 62, 2674-2679 |
10 | Shin, M.-K., Lee, J., and Ryu, W.-S. (2004). A novel cis-acting element facilitates minus-strand DNA synthesis during reverse transcription of the hepatitis B viruses genome. J. Virol. 78, 6252-6262 DOI ScienceOn |
11 | Tang, H., and McLachlan, A. (2002). A pregenomic RNA sequence adjacent to DR1 and complementary to epsilon influences hepatitis B virus replication efficiency. Virology 303, 199-210 DOI ScienceOn |
12 | Tavis, J.E., Perri, S., and Ganem, D. (1994). Hepadnavirus reverse transcription initiates within the stem-loop of the RNA packaging signal and employs a novel strand transfer. J. Virol. 68, 3536-3543 |
13 | Wang, G.H., and Seeger, C. (1993). Novel mechanism for reverse transcription in hepatitis B viruses. J. Virol. 67, 6507-6512 |
14 | Ostrow, K.M., and Loeb, D.D. (2004). Underrepresentation of the 3′ region of the capsid pregenomic RNA of duck hepatitis B virus. J. Virol. 78, 2179-2186 DOI ScienceOn |
15 | Rieger, A., and Nassal, M. (1996). Specific hepatitis B virus minus-strand DNA synthesis requires only the 5′ encapsidation signal and the 3′-proximal direct repeat DR1. J. Virol. 70, 585-589 |
16 | Ganem, D., and Schneider, R. (2001). Hepadnaviridae: the viruses and their replication. In Fields Virology, P.M.H. D. M. Knipe, ed. (Philadelphia, USA: Lippincott-Raven Publishers), pp. 2923-2970 |
17 | Jeong, J.K., Yoon, G.S., and Ryu, W.S. (2000). Evidence that the 5′-end cap structure is essential for encapsidation of hepatitis B virus pregenomic RNA. J. Virol. 74, 5502-5508 DOI ScienceOn |
18 | Shin, M.K., Kim, J.H., Ryu, D.K., and Ryu, W.S. (2008). Circularization of an RNA template via long-range base pairing is critical for hepadnaviral reverse transcription. Virology 371, 362-373 DOI ScienceOn |
19 | Loeb, D.D., and Tian, R. (1995). Transfer of the minus strand of DNA during hepadnavirus replication is not invariable but prefers a specific location. J. Virol. 69, 6886-6891 |
20 | Nassal, M., and Rieger, A. (1996). A bulged region of the hepatitis B virus RNA encapsidation signal contains the replication origin for discontinuous first-strand DNA synthesis. J. Virol. 70, 2764-2773 |
21 | Lee, J., Lee, H.-J., Shin, M.-K., and Ryu, W.-S. (2004). Versatile PCR-mediated insertion or deletion mutagenesis. BioTechniques 36, 398-400 |
22 | Oropeza, C.E., and McLachlan, A. (2007). Complementarity between epsilon and phi sequences in pregenomic RNA influences hepatitis B virus replication efficiency. Virology 359, 371-381 DOI ScienceOn |
23 | Pollack, J.R., and Ganem, D. (1993). An RNA stem-loop structure directs hepatitis B virus genomic RNA encapsidation. J. Virol. 67, 3254-3263 |
24 | Gebauer, F., and Hentze, M.W. (2004). Molecular mechanisms of translational control. Nat. Rev. Mol. Cell Biol. 5, 827-835 DOI ScienceOn |
25 | Pollack, J.R., and Ganem, D. (1994). Site-specific RNA binding by a hepatitis B virus reverse transcriptase initiates two distinct reactions: RNA packaging and DNA synthesis. J. Virol. 68, 5579-5587 |
26 | Munroe, D., and Jacobson, A. (1990). mRNA poly(A) tail, a 3′ enhancer of translational initiation. Mol. Cell. Biol. 10, 3441-3455 DOI |