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Quantitative Trait Loci Associated with Functional Stay-Green SNU-SG1 in Rice  

Yoo, Soo-Cheul (Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University)
Cho, Sung-Hwan (Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University)
Zhang, Haitao (Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University)
Paik, Hyo-Chung (Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University)
Lee, Chung-Hee (Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University)
Li, Jinjie (Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University)
Yoo, Jeong-Hoon (Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University)
Lee, Byun-Woo (Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University)
Koh, Hee-Jong (Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University)
Seo, Hak Soo (Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University)
Paek, Nam-Chon (Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University)
Publication Information
Molecules and Cells / v.24, no.1, 2007 , pp. 83-94 More about this Journal
Abstract
During monocarpic senescence in higher plants, functional stay-green delays leaf yellowing, maintaining photosynthetic competence, whereas nonfunctional stay-green retains leaf greenness without sustaining photosynthetic activity. Thus, functional stay-green is considered a beneficial trait that can increase grain yield in cereal crops. A stay-green japonica rice 'SNU-SG1' had a good seed-setting rate and grain yield, indicating the presence of a functional stay-green genotype. SNU-SG1 was crossed with two regular cultivars to determine the inheritance mode and identify major QTLs conferring stay-green in SNU-SG1. For QTL analysis, linkage maps with 100 and 116 DNA marker loci were constructed using selective genotyping with $F_2$ and RIL (recombinant inbred line) populations, respectively. Molecular marker-based QTL analyses with both populations revealed that the functional stay-green phenotype of SNU-SG1 is regulated by several major QTLs accounting for a large portion of the genetic variation. Three main-effect QTLs located on chromosomes 7 and 9 were detected in both populations and a number of epistatic-effect QTLs were also found. The amount of variation explained by several digenic interactions was larger than that explained by main-effect QTLs. Two main-effect QTLs on chromosome 9 can be considered the target loci that most influence the functional stay-green in SNU-SG1. The functional stay-green QTLs may help develop low-input high-yielding rice cultivars by QTL-marker-assisted breeding with SNU-SG1.
Keywords
Epistasis; $F_2$ Population; Functional Stay-Green; Recombinant Inbred Lines; QTL Mapping; Rice; Selective Genotyping; SNU-SG1;
Citations & Related Records
Times Cited By KSCI : 2  (Citation Analysis)
Times Cited By Web Of Science : 8  (Related Records In Web of Science)
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