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Identification of QTLs for Some Agronomic Traits in Rice Using an Introgression Line from Oryza minuta  

Rahman, Md Lutfor (Department of Plant Science and Research Institute of Agriculture and Life Sciences, Seoul National University)
Chu, Sang Ho (Department of Plant Science and Research Institute of Agriculture and Life Sciences, Seoul National University)
Choi, Min-Sun (Department of Plant Science and Research Institute of Agriculture and Life Sciences, Seoul National University)
Qiao, Yong Li (Department of Plant Science and Research Institute of Agriculture and Life Sciences, Seoul National University)
Jiang, Wenzhu (Department of Plant Science and Research Institute of Agriculture and Life Sciences, Seoul National University)
Piao, Rihua (Department of Plant Science and Research Institute of Agriculture and Life Sciences, Seoul National University)
Khanam, Sakina (Department of Biological and Environmental Science, Kobe University)
Cho, Young-Il (Department of Plant Science and Research Institute of Agriculture and Life Sciences, Seoul National University)
Jeung, Ji-Ung (IRRI- Korea Office, National Institute of Crop Science, Rural Development Administration)
Jena, Kshirod K. (IRRI- Korea Office, National Institute of Crop Science, Rural Development Administration)
Koh, Hee-Jong (Department of Plant Science and Research Institute of Agriculture and Life Sciences, Seoul National University)
Publication Information
Molecules and Cells / v.24, no.1, 2007 , pp. 16-26 More about this Journal
Abstract
Wild progenitor species provide potential gene sources for complex traits such as yield and multiple resistances to biotic and abiotic stresses, and thus are expected to contribute to sustainable food supplies. An introgression line 'IR71033-121-15' was derived from a wild species Oryza minuta (2n = 48, BBCC, Acc No. 101141) at IRRI. Introgression analysis using 530 SSR and STS markers revealed that at least 14 chromosomal segments distributed over 12 chromosomes had been introgressed from O. minuta. An $F_{2:3}$ population from the cross between IR71033 and Junambyeo (a Korean japonica cultivar) consisting of 146 lines was used for quantitative trait loci (QTL) analysis of 16 agronomic traits. A total of 36 single-locus QTLs (S-QTLs) and 45 digenic epistasis (E-QTLs) were identified. In spite of it's inferiority of O. minuta for most of the traits studied, its alleles contributed positively to 57% of the QTLs. The other QTLs originated from either parent, IR71033 or Junambyeo. QTLs for phenotypically correlated traits were mostly detected on introgressed segments. Fourteen QTLs corresponded to QTLs reported earlier, indicating that these QTLs are stable across genetic backgrounds. Twenty-two QTLs controlling yield and its components had not been detected in previous QTL studies. Of these, thirteen consisted of potentially novel alleles from O. minuta. QTLs from O. minuta introgression could be new sources of natural variation for the genetic improvement of rice.
Keywords
Alien Introgression; Oryza minuta; Quantitative Trait Loci (QTL); Rice; Sequence Tagged Site (STS) Markers;
Citations & Related Records
Times Cited By KSCI : 1  (Citation Analysis)
Times Cited By Web Of Science : 11  (Related Records In Web of Science)
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