Browse > Article

Oxidative Modification of Cytochrome c by Hydrogen Peroxide  

Kim, Nam Hoon (Department of Genetic Engineering, Cheongju University)
Jeong, Moon Sik (Department of Genetic Engineering, Cheongju University)
Choi, Soo Young (Department of Biomedical Science, Division of Life Sciences, Hallym University)
Kang, Jung Hoon (Department of Genetic Engineering, Cheongju University)
Abstract
Oxidative alteration of mitochondrial cytochrome c has been linked to disease and is one of the causes of proapoptotic events. We have investigated the modification of cytochrome c by $H_2O_2$. When cytochrome c was incubated with $H_2O_2$, oligomerization of the protein increased and the formation of carbonyl derivatives and dityrosine was stimulated. Radical scavengers prevented these effects suggesting that free radicals are implicated in the $H_2O_2$-mediated oligomerization. Oligomerization was significantly inhibited by the iron chelator, deferoxamine. During incubation of deoxyribose with cytochrome c and $H_2O_2$, damage to the deoxyribose occurred in parallel with the release of iron from cytochrome c. When cytochrome c that had been exposed to $H_2O_2$ was analyzed by amino acid analysis, the tyrosine, histidine and methionine residues proved to be particularly sensitive. These results suggest that $H_2O_2$-mediated cytochrome c oligomerization is due to oxidative damage resulting from free radicals generated by a combination of the peroxidase activity of cytochrome c and the Fenton reaction of free iron released from the oxidatively-damaged protein.
Keywords
Cytochrome c; Fenton Reaction; Free Radical; Oligomerization;
Citations & Related Records
Times Cited By KSCI : 2  (Citation Analysis)
Times Cited By Web Of Science : 13  (Related Records In Web of Science)
연도 인용수 순위
1 Cadenas, E., Boveris, A., and Chance, B. (1980) Low-level chemiluminescence of hydroperoxide - supplemented cytochrome c. Biochem. J. 187, 131−140
2 Davies, K. J. (1986) Intracellular proteolytic systems may function as secondary antioxidant defenses: a hypothesis. J. Free Radic. Biol. Med. 2, 155−173   DOI   ScienceOn
3 Dumont, M. E., Corin, A. F., and Campbell, G. A. (1994) Noncovalent binding of heme induces a compact apocytochrome c structure. Biochemistry 33, 7368−7378
4 Giulivi, C. and Davies, K. J. (1993) Dityrosine and tyrosine oxidation products are endogenous markers for the selective proteolysis of oxidatively modified red blood cell hemoglobin by (the 19 S) proteasome. J. Biol. Chem. 268, 8752−8759
5 Radi, R., Thomson, L., Rubbo, H., and Prodanov, E. (1991) cytochrome c-catalyzed oxidation of organic molecules by hydrogen peroxide. Arch. Biochem. Biophys. 288, 112−117   DOI   ScienceOn
6 Stadtman, E. R. (1993) Oxidation of free amino acids and amino acid residues in proteins by radiolysis and by metal-catalyzed reactions. Annu. Rev. Biochem. 62, 797−821   DOI   ScienceOn
7 Wang, X. and Pielak, G. J. (1999) Equilibrium thermodynamics of a physiologically-relevant heme-protein complex. Biochemistry 38, 16876−16881   DOI   ScienceOn
8 Banci, L., Bertini, I., Cavallaro, G., and Luchinat, C. (2002) Chemical shift-based constraints for solution structure determination of paramagnetic low-spin heme proteins with bis-His and His-CN axial ligands: the cases of oxidized cytochrome b(5) and Met80Ala cyano- cytochrome c. J. Biol. Inorg. Chem. 7, 416−426   DOI   ScienceOn
9 Kato, Y., Kitamoto, N., Kawai, Y., and Osawa, T. (2001) The hydrogen peroxide/copper ion system, but not other metalcatalyzed oxidation systems, produces protein-bound dityrosine. Free Radic. Biol. Med. 31, 624−632   DOI   ScienceOn
10 Pennathur, S., Jackson-Lewis, V., Przedborski, S., and Heinecke, J. W. (1999) Mass spectrometric quantification of 3-nitrotyrosine, ortho-tyrosine, and o,o′-dityrosine in brain tissue of 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine-treated mice, a model of oxidative stress in Parkinson's disease. J. Biol. Chem. 274, 34621−34628   DOI   ScienceOn
11 Smith, P. K., Krohn, R. I., Hermanson. G. T., Mallia, A. K., Gartner, F. H., et al. (1985) Measurement of protein using bicinchoninic acid. Anal. Biochem. 150, 76−85
12 Lawrence, A., Jones, C. M., Wardman, P., and Burkitt, M. J. (2003) Evidence for the role of a peroxidase compound Itype intermediate in the oxidation of glutathione, NADH, ascorbate, and dichlorofluorescin by cytochrome c/$H_2O_2$. Implications for oxidative stress during apoptosis. J. Biol. Chem. 278, 29410−29419   DOI   ScienceOn
13 Moore, G. R. and Pettigrew, G. W. (1990) cytochrome c: Evolutionary, Structure, and Physicochemical Aspects, Springer- Verlag, Berlin
14 Radi, R., Sims, S., Cassina, A., and Turrens, J. F. (1993) Roles of catalase and cytochrome c in hydroperoxide-dependent lipid peroxidation and chemiluminescence in rat heart and kidney mitochondria. Free Radic. Biol. Med. 15, 653−659   DOI   ScienceOn
15 Berlett, B. S. and Stadtman, E. R. (1997) Protein oxidation in aging, disease, and oxidative stress. J. Biol. Chem. 272, 20313− 20316
16 Deshmukh, M. and Johnson, E. M., Jr. (1998) Evidence of a novel event during neuronal death: development of competence- to-die in response to cytoplasmic cytochrome c. Neuron 21, 695−705   DOI   ScienceOn
17 Dumont, M. E., Cardillo, T. S., Hayes, M. K., and Sherman, F. (1991) Role of cytochrome c heme lyase in mitochondrial import and accumulation of cytochrome c in Saccharomyces cerevisiae. Mol. Cell. Biol. 11, 5487−5496
18 Halliwell, B. and Gutteridge, J. M. (1981) Formation of thiobarbituric- acid-reactive substance from deoxyribose in the presence of iron salts: the role of superoxide and hydroxyl radicals. FEBS Lett. 128, 347−352   DOI   ScienceOn
19 Sagripanti, J. L. and Kraemer, K. H. (1989) Site-specific oxidative DNA damage at polyguanosines produced by copper plus hydrogen peroxide. J. Biol. Chem. 264, 1729−1734
20 Heinecke, J. W., Li, W., Daehnke, H. L. 3rd, and Goldstein, J. A. (1993) Dityrosine, a specific marker of oxidation, is synthesized by the myeloperoxidase-hydrogen peroxide system of human neutrophils and macrophages. J. Biol. Chem. 268, 4069−4077
21 Zweier, J. L., Kuppusamy, P., Williams, R., Rayburn, B. K., Smith, D., et al. (1989) Measurement and characterization of postischemic free radical generation in the isolated perfused heart. J. Biol. Chem. 264, 18890−18895
22 Imlay, J. A., Chin, S. M., and Linn, S. (1988) Toxic DNA damage by hydrogen peroxide through the Fenton reaction in vivo and in vitro. Science 240, 640−642
23 Millett, F. and Scott, R. (1996) In cytochrome c, A Multidisciplinary Approach, Mauk, A. G. and Scott, R. A. (eds.), pp. 475−487, University Science Books, Sausalito, CA
24 Pelletier, H. and Kraut, J. (1992) Crystal structure of a complex between electron transfer partners, cytochrome c peroxidase and cytochrome c. Science 258, 1748−1755
25 Hashimoto, M., Takeda, A., Hsu, L. J., Takenouchi, T., and Masliah, E. (1999) Role of cytochrome c as a stimulator of alpha-synuclein aggregation in Lewy body disease. J. Biol. Chem. 274, 28849−28852   DOI
26 Huggins, T. G., Wells-Knecht, M. C., Detorie, N. A., Baynes, J. W., and Thorpe, S. R. (1993) Formation of o-tyrosine and dityrosine in proteins during radiolytic and metal-catalyzed oxidation. J. Biol. Chem. 268, 12341−12347
27 Hugli, T. E. and Moore, S. (1972) Determination of the tryptophan content of proteins by ion exchange chromatography of alkaline hydrolysates. J. Biol. Chem. 247, 2828−2834
28 Li, P., Nijhawan, D., Budihardjo, I., Srinivasula, S. M., Ahmad, M., et al. (1997) cytochrome c and dATP-dependent formation of Apaf-1/caspase-9 complex initiates an apoptotic protease cascade. Cell 91, 479−489   DOI   ScienceOn
29 Zou, H., Li, Y., Liu, X., and Wang, X. (1999) An APAF-1- cytochrome c multimeric complex is a functional apoptosome that activates procaspase-9. J. Biol. Chem. 274, 11549−11556   DOI   ScienceOn
30 Chen, Y. R., Deterding, L. J., Sturgeon, B. E., Tomer, K. B., and Mason, R. P. (2002) Protein oxidation of cytochrome c by reactive halogen species enhances its peroxidase activity. J. Biol. Chem. 277, 29781−29791
31 Pieroni, L., Khalil, L., Charlotte, F., Poynard, T., Piton, A., et al. (2001) Comparison of bathophenanthroline sulfonate and ferene as chromogens in colorimetric measurement of low hepatic iron concentration. Clin. Chem. 47, 2059−2061
32 Laemmli, U. K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680−685
33 O'Connell, M. J. and Peters, T. J. (1987) Ferritin and haemosiderin in free radical generation, lipid peroxidation and protein damage. Chem. Phys. Lipids 45, 241−249
34 Towbin, H., Staehelin, T., and Gordon, J. (1979) Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc. Natl. Acad. Sci. USA 76, 4350−4354
35 Barr, D. P., Gunther, M. R., Deterding, L. J., Tomer, K. B., and Mason, R. P. (1996) ESR spin-trapping of a protein-derived tyrosyl radical from the reaction of cytochrome c with hydrogen peroxide. J. Biol. Chem. 271, 15498−15503   DOI
36 Green, D. R. and Evan, G. I. (2002) A matter of life and death. Cancer Cell 1, 19−30
37 Halliwell, B. and Gutteridge, J. M. C. (1999) Free Radicals in Biology and Medicine, Oxford Press, New York
38 Oliver, C. N., Levine, R. L., and Stadtman, E. R. (1987) A role of mixed-function oxidation reactions in the accumulation of altered enzyme forms during aging. J. Am. Geriatr. Soc. 35, 947−956
39 Friedlander, R. M. (2003) Apoptosis and caspases in neurodegenerative diseases. N. Engl. J. Med. 348, 1365−1375   DOI   ScienceOn
40 Kim, C. S., Lee, C.-H., Lee, P. H., and Han, S. (2004) Inactivation of mitochondrial electron transport by photosensitization of a pheophorbide a derivative. Mol. Cells 17, 347−352
41 Liu, X., Kim, C. N., Yang, J., Jemmerson, R., and Wang, X. (1996) Induction of apoptotic program in cell-free extracts: requirement for dATP and cytochrome c. Cell 86, 147−157   DOI   ScienceOn
42 Petrosillo, G., Ruggiero, F. M., Pistolese, M., and Paradies, G. (2001) Reactive oxygen species generated from the mitochondrial electron transport chain induce cytochrome c dissociation from beef-heart submitochondrial particles via cardiolipin peroxidation. Possible role in the apoptosis. FEBS Lett. 509, 435−438   DOI   ScienceOn
43 Flaherty, J. T. and Weisfeldt, M. L. (1988) Reperfusion injury. Free Radic. Biol. Med. 5, 409−419
44 Atwood, C. S., Perry, G., Zeng, H., Kato, Y., Jones, W. D., et al. (2004) Copper mediates dityrosine cross-linking of Alzheimer's amyloid-beta. Biochemistry 43, 560−568   DOI   ScienceOn
45 Sagripanti, J. L., Swicord, M. L., and Davis, C. C. (1987) Microwave effects on plasmid DNA. Radiat. Res. 110, 219−231
46 Levine, R. L., Williams, J. A., Stadtman, E. R., and Shacter, E. (1994) Carbonyl assays for determination of oxidatively modified proteins. Methods Enzymol. 233, 346−357