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http://dx.doi.org/10.5187/jast.2021.e100

Complete genome sequence of Lactobacillus amylovorus 1394N20, a potential probiotic strain, isolated from a Hanwoo calf  

Oh, Young Joon (Research and Development Division, World Institute of Kimchi)
Kim, Joon Yong (Research and Development Division, World Institute of Kimchi)
Lee, Jieun (SME Service Department, Strategy and Planning Division, World Institute of Kimchi)
Lim, Seul Ki (Research and Development Division, World Institute of Kimchi)
Yu, Dohyeon (College of Veterinary Medicine, Gyeongsang National University)
Oh, Yeon-su (College of Veterinary Medicine and Institute of Veterinary Science, Kangwon National University)
Park, Jinho (Veterinary Internal Medicine, College of Veterinary Medicine, Jeonbuk National University)
Choi, Hak-Jong (Research and Development Division, World Institute of Kimchi)
Publication Information
Journal of Animal Science and Technology / v.63, no.5, 2021 , pp. 1207-1210 More about this Journal
Abstract
Lactobacillus amylovorus are known to exist in the intestinal flora of healthy cattle or pigs. The L. amylovorus strain 1394N20 was isolated from the feces of the Hanwoo calf (Bos taurus coreanae). The genome of strain 1394N20 consists of a single circular chromosome (2,176,326 bp) with overall guanine + cytosine content of 37.8 mol%. Moreover, 2,281 protein-coding sequences, 15 rRNAs, and 65 tRNAs genes were identified in the chromosome based on the results of annotation. The bacterium has a gene encoding endoglucanase, an enzyme that hydrolyzes the 1,4-β-D-glycosidic linkages in cellulose, hemicellulose, lichenin, and cereal β-D-glucans. Genomic sequencing of L. amylovorus strain 1394N20 reveals the immense potential of the strain as a probiotic with nutrient digestibility.
Keywords
Lactobacillus amylovorus; Hanwoo calf; Whole genome sequencing; Endoglucanase;
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