1 |
Cavalier-Smith T, 2013. Early evolution of eukaryote feeding modes, cell structural diversity, and classification of the protozoan phyla Loukozoa, Sulcozoa, and Choanozoa. European Journal of Protistology, 49:115-178. http://dx.doi.org/10.1016/j.ejop.2012.06.001
DOI
|
2 |
Aitken D, Hay J, Kinnear FB, Kirkness CM, Lee WR, Seal DV, 1996. Amoebic keratitis in a wearer of disposable contact lenses due to a mixed Vahlkampfia and Hartmannella infection. Ophthalmology, 103:485-494.
DOI
|
3 |
Bolivar I, Fahrni J, Smirnov A, Pawlowski J, 2001. SSU rRNA-based phylogenetic position of the genera Amoeba and Chaos (Lobosea, Gymnamoebia): the origin of Gymnamoebae revisited. Molecular Biology Evolution, 18:2306-2314.
DOI
|
4 |
Brieland JK, Fantone JC, Remick DG, LeGendre M, McClain M, Engleberg NC, 1997. The role of Legionella pneumophila-infected Hartmannella vermiformis as an infectious particle in a murine model of Legionnaires’ disease. Infection and Immunity, 65:5330-5333.
|
5 |
Brown MW, Silberman JD, Spiegel FW, 2011. “Slime molds” among the Tubulinea (Amoebozoa): molecular systematics and taxonomy of Copromyxa. Protist, 162:277-287. http://dx.doi.org/10.1016/j.protis.2010.09.003
DOI
|
6 |
Cavalier-Smith T, Chao EEY, Oates B, 2004. Molecular phylogeny of Amoebozoa and evolutionary significance of the unikont Phalansterium. European Journal of Protistology, 40:21-48. http://dx.doi.org/10.1016/j.ejop.2003.10.001
DOI
|
7 |
Cavalier-Smith T, Fiore-Donno AM, Chao E, Kudryavtsev A, Berney C, Snell EA, Lewis R, 2015. Multigene phylogeny resolves deep branching of Amoebozoa. Molecular Phylogenetics and Evolution, 83:293-304. http://dx.doi.org/10.1016/j.ympev.2014.08.011
DOI
|
8 |
Corliss JO, 2001. Protozoan taxonomy and systematics. Encyclopedia of Life Sciences [Internet]. John Wiley & Sons, Inc., Chichester, Accessed 1 Dec 2015, .
|
9 |
Duguid IGM, Dart JKG, Morlet N, Allan BDS, Matheson M, Ficker L, Tuft S, 1997. Outcome of Acanthamoeba keratitis treated with polyhexamethyl biguanide and propamidine. Ophthalmology, 104:1587-1592. http://dx.doi.org/10.1016/S0161-6420(97)30092-X
DOI
|
10 |
Corsaro D, Michel R, Walochnik J, Müller KD, Greub G, 2010. Saccamoeba lacustris, sp. nov. (Amoebozoa: Lobosea: Hart-mannellidae), a new lobose amoeba, parasitized by the novel Chlamydia 'Candidatus Metachlamydia Lacustris' (Chlamydiae: Parachlamydiaceae). European Journal of Protistology, 46:86-95. http://dx.doi.org/10.1016/j.ejop.2009.11.002
DOI
|
11 |
De Jonkheere JF, 2002. A century of research on the amoeboflagellate genus Naegleria. Acta Protozoologica, 41:309-342.
|
12 |
De Jonckheere JF, Brown S, 1999. Non-Acanthamoeba amoebic keratitis. Cornea, 18:499-501.
DOI
|
13 |
Dyková I, Pindová Z, Fiala I, Dvořáková H, Macháčková B, 2005. Fish-isolated strains of Hartmannella vermiformis Page, 1967: morphology, phylogeny and molecular diagnosis of the species in tissue lesions. Folia Parasitologica, 52:295-303.
DOI
|
14 |
Fouque E, Yefimova M, Trouilhé MC, Quellard N, Fernandez B, Rodier MH, Thomas V, Humeau P, Héchard Y, 2015. Morphological study of the encystment and excystment of Vermamoeba vermiformis revealed original traits. Journal of Eukaryotic Microbiology, 62:327-337. http://dx.doi.org/10.1111/jeu.12185
DOI
|
15 |
Medlin L, Elwood HJ, Stickel S, Sogin ML, 1988. The characterization of enzymatically amplified eukaryotic 16S-like rRNA coding regions. Gene, 71:491-499. http://dx.doi.org/10.1016/0378-1119(88)90066-2
DOI
|
16 |
Nylander JAA, 2004. MrModeltest, version 2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University, Uppsala.
|
17 |
Park JS, Simpson AGB, 2011. Characterization of Pharyngomonas kirbyi (=“Macropharyngomonas halophila” nomen nudum), a very deep-branching, obligately halophilic heterolobosean flagellate. Protist, 162:691-709. http://dx.doi.org/10.1016/j.protis.2011.05.004
DOI
|
18 |
Park JS, De Jonckheere JF, Simpson AGB, 2012. Characterization of Selenaion koniopes n. gen., n. sp., an amoeba that represents a new major lineage within Heterolobosea, isolated from the Wieliczka salt mine. Journal of Eukaryotic Microbiology, 59:601-613. http://dx.doi.org/10.1111/j.1550-7408.2012.00641.x
DOI
|
19 |
Page FC, 1967. Taxonomic criteria for limax amoebae, with descriptions of 3 new species of Harmannella and 3 of Vahlkampfia. Journal of Protozoology, 14:499-521. http://dx.doi.org/10.1111/j.1550-7408.1967.tb02036.x
DOI
|
20 |
Page FC, 1988. A new key to freshwater and soil gymnamoebae. Culture Collection of Algae and Protozoa, Freshwater Biological Association, Cumbria, pp. 1-122.
|
21 |
Park JS, Simpson AGB, Brown S, Cho BC, 2009. Ultrastructure and molecular phylogeny two heterolobosean amoebae, Euplaesiobystra hypersalinica gen. et sp. nov. and Tulamoeba peronaphora gen. et sp. nov., isolated from an extremely hypersaline habitat. Protist, 160:265-283. http://dx.doi.org/10.1016/j.protis.2008.10.002
DOI
|
22 |
Park JS, Simpson AGB, Lee WJ, Cho BC, 2007. Ultrastructure and phylogenetic placement within Heterolobosea of the previously unclassified, extremely halophilic heterotrophic flagellate Pleurostomum flabellatum (Ruinen 1938). Protist, 158:397-413. http://dx.doi.org/10.1016/j.protis.2007.03.004
DOI
|
23 |
Patterson DJ, Rogerson A, Vørs N, 2002. Class Heterolobosea. In: An illustrated guide to the protozoa, 2nd ed. (Eds., Lee JJ, Leedale GF, Bradbury P). Society of Protozoologists, Lawrence, KS, pp. 1104-1111.
|
24 |
Smirnov AV, Brown S, 2004. Guide to the methods of study and identification of soil gymnamoebae. Protistology, 3:148-190.
|
25 |
Smirnov AV, Chao E, Nassonova ES, Cavalier-Smith T, 2011. A revised classification of naked lobose amoebae (Amoeobozoa: Lobosa). Protist, 162:545-570. http://dx.doi.org/10.1016/j.protis.2011.04.004
DOI
|
26 |
Rogerson A, Patterson DJ, 2002. The naked ramicristate amoebae (Gymnamoebae). In: An illustrated guide to the protozoa, 2nd ed. (Eds., Lee JJ, Leedale GF, Bradbury P). Society of Protozoologists, Lawrence, KS, pp. 1023-1053.
|
27 |
Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP, 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology, 61:539-542. http://dx.doi.org/10.1093/sysbio/sys029
DOI
|
28 |
Smirnov A, Nassonova E, Berney C, Fahrni J, Bolivar I, Pawlowski J, 2005. Molecular phylogeny and classification of the lobose amoebae. Protist, 156:129-142. http://dx.doi.org/10.1016/j.protis.2005.06.002
DOI
|
29 |
Smirnov AV, Michel R, 1999. New data on the cyst structure of Hartmannella vermiformis Page, 1967 (Lobosea, Gymnamoebia). Protistology, 1:82-85.
|
30 |
Stamatakis A, 2006. RAxML-VI-HPC: maximum likelihoodbased phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22:2688-2690. http://dx.doi.org/10.1093/bioinformatics/btl446
DOI
|
31 |
Walochnik J, Michel R, Aspöck H, 2002. Discrepancy between morphological and molecular biological characters in a strain of Hartmannella vermiformis Page 1967 (Lobosea, Gymnamoebia). Protistology, 2:185-188.
|
32 |
Watson PM, Sorrell SC, Brown MW, 2014. Ptolemeba n. gen., a novel genus of Hartmannellid amoebae (Tubulinea, Amoebozoa); with an emphasis on the taxonomy of Saccamoeba. Journal of Eukaryotic Microbiology, 61:611-619. http://dx.doi.org/10.1111/jeu.12139
DOI
|
33 |
Zuendorf A, Bunge J, Behnke A, Barger KJA, Stoeck T, 2006. Diversity estimates of microeukaryotes below the chemocline of the anoxic Mariager Fjord, Denmark. FEMS Microbial Ecology, 58:476-491. http://dx.doi.org/10.1111/j.1574-6941.2006.00171.x
DOI
|