Identification of putative periodontal pathogens in Korean chronic periodontitis patients |
Yun, Jeong-Ho
(Department of Dentistry, College of Medicine, Kwandong University, Myongji Hospital)
Park, Jung-Eun (Systems Microbiology Research Center, Korea Research Institute of Bioscience and Biotechnology) Kim, Doo-Il (Systems Microbiology Research Center, Korea Research Institute of Bioscience and Biotechnology) Lee, Syng-Ill (Department of Oral Biology, Brain Korea 21 Project and Oral Science Research Center, College of Dentistry, Yonsei University) Choi, Seong-Ho (Department of Periodontology, Research Institute for Periodontal Regeneration, College of Dentistry, Yonsei University) Cho, Kyoo-Sung (Department of Periodontology, Research Institute for Periodontal Regeneration, College of Dentistry, Yonsei University) Lee, Dae-Sil (Systems Microbiology Research Center, Korea Research Institute of Bioscience and Biotechnology) |
1 | Oliver RC, Brown LJ, Loe HJ. Variations in the prevalence and extent of periodontitis. Am Dent Assoc 1991;122:43-48 |
2 | Socransky SS, Haffajee AD. Periodontal microbial ecology. Periodontol 2000 2005;38:135-187 DOI ScienceOn |
3 | Lau L, Sanz M, Herrera D, et al. Quantitative real-time polymerase chain reaction versus culture: a comparison between two methods for the detection and quantification of Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis and Tannerella forsythensis in subgingival plaque samples. J Clin Periodontol 2004;31:1061-1069 DOI ScienceOn |
4 | Rocas IN, Siqueira JF Jr. Detection of novel oral species and phylotypes in symptomatic endodontic infections including abscesses. FEMS Microbiol Lett 2005;250:279-285 DOI ScienceOn |
5 | Tran SD, Rudney JD. Improved multiplex PCR using conserved and species-specific 16S rRNA gene primers for simultaneous detection of Actinobacillus actinomycetem-comitans, Bacteroidesforsythus, and Porphyromonas gingivalis. J Clin Microbiol 1999;37:3504-3508 PUBMED |
6 | Doan N, Contreras A, Flynn J, Slots J, Chen C. Molecular identification of Dialister pneumosintes in subgingival plaque of humans. J Clin Microbiol 2000;38:3043-3047 PUBMED |
7 | Siqueira JF Jr, Rocas IN. Detection of Filifactor alocis in endodontic infections associated with different forms of periradicular diseases. Oral Microbiol Immunol 2003;18:263-265 DOI ScienceOn |
8 | Conrads G, Gharbia SE, Gulabivala K, Lampert F, Shah HN. The use of a 16s rDNA directed PCR for the detection of endodontopathogenic bacteria. J Endod 1997;23:433-438 DOI ScienceOn |
9 | Bogen G, Slots J. Black-pigmented anaerobic rods in closed periapical lesions. Int Endod J. 1999;32:204-210 DOI ScienceOn |
10 | Okamoto M, Maeda N, Kondo K, Leung KP. Hemolytic and hemagglutinating activities of Prevotella intermedia and Prevotella nigrescens. FEMS Microbiol Lett 1999;178:299-304 DOI |
11 | Kumar PS, Griffen AL, Moeschberger ML, Leys EJ. Identification of candidate periodontal pathogens and beneficial species by quantitative 16S clonal analysis. J Clin Microbiol 2005;43:3944-3955 DOI ScienceOn |
12 | Siqueira JF Jr, Rocas IN. Pseudoramibacter alactolyticus in primary endodontic infections. J Endod 2003;29:735-738 DOI ScienceOn |
13 | Eick S, Pfister W. Comparison of microbial cultivation and a commercial PCR based method for detection of periodontopathogenic species in subgingival plaque samples. J Clin Periodontol 2002;29:638-644 DOI ScienceOn |
14 | Suda R, Kurihara C, Kurihara M, et al. Determination of eight selected periodontal pathogens in the subgingival plaque of maxillary first molars in Japanese school children aged 8-11 years. J Periodontal Res 2003;38:28-35 DOI ScienceOn |
15 | Jervoe-Storm PM, Koltzscher M, Falk W, Dörfler A, Jepsen S. Comparison of culture and real-time PCR for detection and quantification of five putative periodontopathogenic bacteria in subgingival plaque samples. J Clin Periodontol 2005;32:778-783 DOI ScienceOn |
16 | Riggio MP, Macfarlane TW, Mackenzie D, et al. Comparison of polymerase chain reaction and culture methods for detection of Actinobacillus actinomycetemcomitans and Porphyromonas gingivalis in subgingival plaque samples. J Periodontal Res 1996;31:496-501 DOI ScienceOn |
17 | Tan KS, Woo CH, Ong G, Song KP. Prevalence of Actinobacillus actinomycetemcomitans in an ethnic adult Chinese population. J Clin Periodontol 2001;28:886-890 DOI ScienceOn |
18 | Haffajee AD, Cugini MA, Tanner A, et al. Subgingival microbiota in healthy, well-maintained elder and periodontitis subjects. J Clin Periodontol 1998;25:346-353 DOI ScienceOn |
19 | Socransky SS, Haffajee AD. Microbial mechanisms in the pathogenesis of destructive periodontal diseases: a critical assessment. J Periodontal Res 1991;26:195-212 DOI |
20 | Suzuki N, Nakano Y, Yoshida Y, Ikeda D, Koga T. Identification of Actinobacillus actinomycetemcomitans serotypes by multiplex PCR. J Clin Microbiol 2001;39:2002-2005 DOI ScienceOn |
21 | Kaplan JB, Perry MB, MacLean LL, et al. Structural and genetic analyses of O polysaccharide from Actinobacillus actinomycetemcomitans serotype f. Infect Immun 2001;69:5375-5384 DOI |
22 | Nakano Y, Yoshida Y, Suzuki N, Yamashita Y, Koga T. A gene cluster for the synthesis of serotype d-specific polysaccharide antigen in Actinobacillus actinomycetemcomitans. Biochim Biophys Acta 2000;1493:259-263 DOI PUBMED |
23 | Wahlfors J, Meurman JH, Vaisanen P, et al. Simultaneous detection of Actinobacillus actinomycetemcomitans and Porphyromonas gingivalis by a rapid PCR method. J Dent Res 1995;74:1796-1801 DOI ScienceOn |
24 | Tanner AC, Haffer C, Bratthall GT, Visconti RA, Socransky SS. A study of the bacteria associated with ad vancing periodontitis in man. J Clin Periodontol 1979;6:278-307 DOI |
25 | Yoshida Y, Nakano Y, Yamashita Y, Koga T. Identification of a genetic locus essential for serotype b specific antigen synthesis in Actinobacillus actinomycetemcomitans. Infect Immun 1998;66:107-114 PUBMED |
26 | Slots J. The predominant cultivable microflora of advanced periodontitis. Scand J Dent Res 1977;85:114-121 PUBMED |
27 | Haffajee AD, Bogren A, Hasturk H, et al. Subgingival microbiota of chronic periodontitis subjects from different geographic locations. J Clin Periodontol 2004;31:996-1002 DOI ScienceOn |
28 | Yoshida Y, Nakano Y, Suzuki N, et al. Genetic analysis of the gene cluster responsible for synthesis of serotype e-specific polysaccharide antigen in Actinobacillus actinomycetemcomitans. Biochim Biophys Acta 1999;1489:457-461 DOI PUBMED ScienceOn |
29 | Kumar PS, Griffen AL, Barton JA, et al. New bacterial species associated with chronic periodontitis. J Dent Res 2003;82:338-344 DOI ScienceOn |
30 | Nonnenmacher C, Dalpke A, Rochon J, et al. Real-time polymerase chain reaction for detection and quantification of bacteria in periodontal patients. J Periodontol 2005;76:1542-1549 DOI |
31 | Wu JS, Lee C, Wu CC, Shiue YL. Primer design using genetic algorithm. Bioinformatics 2004;20:1710-1717 DOI ScienceOn |
32 | Jarman SN. Amplicon: software for designing PCR primers on aligned DNA sequences. Bioinformatics 2004;20:1644-1645 DOI ScienceOn |
33 | Gunsolley JC, Tew JG, Gooss CM, Burmeister JA, Schenkein HA. Effects of race and periodontal status on antibody reactive with Actinobacillus actinomycetemcomitans strain Y4. J Periodontal Res 1988;23:303-307 DOI |
34 | Dahlen G, Leonhardt A. A new checkerboard panel for testing bacterial markers in periodontal disease. Oral Microbiol Immunol 2006;21:6-11 DOI PUBMED ScienceOn |
35 | DNA Mini Kit and DNA Blood Mini Kit Handbook, Qiagen, Germany |
36 | Nakano Y, Yoshida Y, Yamashita Y, Koga T. A gene cluster for 6-Deoxy-L-Talan synthesis in Actinobacillus actinomycetemcomitans. Biochim Biophys Acta 1998;1442:409-414 DOI PUBMED ScienceOn |
37 | Hamlet S, Ellwood R, Cullinan M, et al. Persistent colonization with Tannerella forsythensis and loss of attachment in adolescents. J Dent Res 2004;83:232-235 DOI ScienceOn |
38 | Socransky SS, Haffajee AD, Cugini MA, Smith C, Kent RL Jr. Microbial complexes in subgingival plaque. J Clin Periodontol 1998;25:134-144 DOI ScienceOn |
39 | Ashimoto A, Chen C, Bakker I, Slots J. Polymerase chain reaction detection of 8 putative periodontal pathogens in subgingival plaque of gingivitis and advanced periodontitis lesions. Oral Microbiol Immunol 1996;11:266-273 DOI ScienceOn |
40 | Loomer PM. Microbiological diagnostic testing in the treatment of periodontal diseases. Periodontol 2000 2004;34:49-56 DOI ScienceOn |
41 | Choi BK, Park SH, Yoo YJ, et al. Detection of major putative periodontopathogens in Korean advanced adult periodontitis patients using a nucleic acid-based approach. J Periodontol 2000;71:1387-1394 DOI ScienceOn |
42 | Haffajee AD, Teles RP, Socransky SS. Association of Eubacterium nodatum and Treponema denticola with human periodontitis lesions. Oral Microbiol Immunol 2006;21:269-282 DOI ScienceOn |
43 | Armitage GC. Development of a classification system for periodontal diseases and conditions. Ann Periodontol 1999;4:1-6 DOI ScienceOn |