과제정보
이 논문은 중소벤처기업부의 재원으로 산학연 Collabo R&D 사업(S2911082), 과학기술정보통신부의 재원으로 한국연구재단(NRF-2021R1F1A1046822)의 지원을 받아 수행되었으며, 연구비 지원에 감사드립니다.
참고문헌
- World Water Assessment Programme, Water for a sustainable world, The United Nations World Water Development Report, 20-34, UNESCO, Paris, France (2015).
- World Water Assessment Programme, Wastewater: the untapped resource, The United Nations World Water Development Report, 12-18, UNESCO, Paris, France (2017).
- B. Jeon, J. Han, S.-K. Kim, J.-H. Ahn, H.-C. Oh, and H.-D. Park, An overview of problems cyanotoxins produced by cyanobacteria and the solutions thereby, J. Korean Soc. Environ. Eng., 37, 657-667 (2015). https://doi.org/10.4491/KSEE.2015.37.12.657
- J. Kim, J. Lim, and C. Lee, Quantitative real-time PCR approaches for microbial community studies in wastewater treatment systems: applications and considerations, Biotechnol. Adv., 31, 1358-1373 (2013). https://doi.org/10.1016/j.biotechadv.2013.05.010
- J. Nestorov, G. Matic, I. Elakovic, and N. Tanic, Gene expression studies: How to obtain accurate and reliable data by quantitative real-time RT PCR, J. Med. Biochem., 32, 325-338 (2013). https://doi.org/10.2478/jomb-2014-0001
- H. Jung, B. Yim, S. Lim, B. Kim, B. Yoon, and O. Lee, Development of mcyB-specific ultra-rapid real-time PCR for quantitative detection of Microcystis aeruginosa, J. Korean Soc. Water Environ., 34, 46-56 (2018). https://doi.org/10.15681/KSWE.2017.34.1.46
- A. Moter and U. B. Gobel, Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms, J. Microbiol. Methods, 41, 85-112 (2000). https://doi.org/10.1016/S0167-7012(00)00152-4
- T. Narihiro and Y. Sekiguchi, Oligonucleotide primers, probes and molecular methods for the environmental monitoring of methanogenic archaea, Microbial Biotechnology, 4, 585-602 (2011). https://doi.org/10.1111/j.1751-7915.2010.00239.x
- Z. Zhou, J. Chen, H. Cao, P. Han, and J. D. Gu, Analysis of methane-producing and metabolizing archaeal and bacterial communities in sediments of the northern South China Sea and coastal Mai Po Nature Reserve revealed by PCR amplification of mcrA and pmoA genes, Frontiers in microbiology, 5, 789 (2015). https://doi.org/10.3389/fmicb.2014.00789
- C. A. Heid, J. Stevens, K. J. Livak, and P. M. Williams, Real time quantitative PCR, Genome Res., 6, 986-994 (1996). https://doi.org/10.1101/gr.6.10.986
- M. Tajadini, M. Panjehpour, and S. H. Javanmard, Comparison of SYBR Green and TaqMan methods in quantitative real-time polymerase chain reaction analysis of four adenosine receptor subtypes, Adv. Biomed. Res., 3, 85 (2014). https://doi.org/10.4103/2277-9175.127998
- Y. Cao, M. Yu, G. Dong, B. Chen, and B. Zhang, Digital PCR as an Emerging Tool for Monitoring of Microbial Biodegradation, Molecules, 25, 706 (2020). https://doi.org/10.3390/molecules25030706
- V. Kapoor, T. Pitkanen, H. Ryu, M. Elk, D. Wendell, and J. W. Santo Domingo, Distribution of human-specific bacteroidales and fecal indicator bacteria in an urban watershed impacted by sewage pollution, determined using RNA-and DNA-based quantitative PCR assays, Appl. Environ. Microbiol., 81, 91-99 (2015). https://doi.org/10.1128/AEM.02446-14
- L. Ogorzaly, H.-M. Cauchie, C. Penny, A. Perrin, C. Gantzer, and I. Bertrand, Two-day detection of infectious enteric and non-enteric adenoviruses by improved ICC-qPCR, Appl. Microbiol. Biotechnol., 97, 4159-4166 (2013). https://doi.org/10.1007/s00253-013-4782-4
- D. Li, A. Z. Gu, W. Yang, M. He, X. Hu, and H.-C. Shi, An integrated cell culture and reverse transcription quantitative PCR assay for detection of infectious rotaviruses in environmental waters, J. Microbiol. Methods, 82, 59-63 (2010). https://doi.org/10.1016/j.mimet.2010.04.003
- P. B. Gedalanga and B. H. Olson, Development of a quantitative PCR method to differentiate between viable and nonviable bacteria in environmental water samples, Appl. Microbiol. Biotechnol., 82, 587-596 (2009). https://doi.org/10.1007/s00253-008-1846-y
- Biotium, Viability PCR PMAxx and PMA Viablity PCR Dyes, accessed April 25, 2022 Retrieved from https://biotium.com/technology/pma-for-viability-pcr.
- A. Nocker, K. E. Sossa, and A. K. Camper, Molecular monitoring of disinfection efficacy using propidium monoazide in combination with quantitative PCR, J. Microbiol. Methods, 70, 252-260 (2007). https://doi.org/10.1016/j.mimet.2007.04.014
- J. D. Oliver and R. Bockian, In vivo resuscitation, and virulence towards mice, of viable but nonculturable cells of Vibrio vulnificus, Appl. Environ. Microbiol., 61, 2620-2623 (1995). https://doi.org/10.1128/aem.61.7.2620-2623.1995
- L. Vondrakova, H. Turonova, V. Scholtz, J. Pazlarova, and K. Demnerova, Impact of various killing methods on EMA/PMA-qPCR efficacy, Food Control, 85, 23-28 (2018). https://doi.org/10.1016/j.foodcont.2017.09.013
- W. Ahmed, S. Payyappat, M. Cassidy, and C. Besley, A duplex PCR assay for the simultaneous quantification of Bacteroides HF183 and crAssphage CPQ_056 marker genes in untreated sewage and stormwater, Environ. Int., 126, 252-259 (2019). https://doi.org/10.1016/j.envint.2019.01.035
- N. Ramalingam, Z. Rui, H. B. Liu, C. C. Dai, R. Kaushik, B. Ratnaharika, and H. Q. Gong, Real-time PCR-based microfluidic array chip for simultaneous detection of multiple waterborne pathogens, Sensors Actuators B Chem., 145, 543-552 (2010). https://doi.org/10.1016/j.snb.2009.11.025
- S. Ishii, G. Kitamura, T. Segawa, A. Kobayashi, T. Miura, D. Sano, and S. Okabe, Microfluidic quantitative PCR for simultaneous quantification of multiple viruses in environmental water samples, Appl. Environ. Microbiol., 80, 7505-7511 (2014). https://doi.org/10.1128/AEM.02578-14
- S. L. Crane, J. Van Dorst, G. C. Hose, C. K. King, and B. C. Ferrari, Microfluidic qPCR enables high throughput quantification of microbial functional genes but requires strict curation of primers, Front. Environ. Sci., 6, 145 (2018). https://doi.org/10.3389/fenvs.2018.00145
- M. A. Borchardt, A. B. Boehm, M. Salit, S. K. Spencer, K. R. Wigginton, and R. T. Noble, The environmental microbiology minimum information (EMMI) guidelines: qPCR and dPCR quality and reporting for environmental microbiology, Environ. Sci. Technol., 55, 10210-10223 (2021). https://doi.org/10.1021/acs.est.1c01767