DOI QR코드

DOI QR Code

Cytochrome P450 and the glycosyltransferase genes are necessary for product release from epipyrone polyketide synthase in Epicoccum nigrum

  • Choi, Eun Ha (Department of Biological Sciences and Bioinformatics, Myongji University) ;
  • Park, Si-Hyung (Department of Oriental Medicine Resources and Institute for Traditional Korean Medicine Industry, Mokpo National University) ;
  • Kwon, Hyung-Jin (Department of Biological Sciences and Bioinformatics, Myongji University)
  • Received : 2021.06.17
  • Accepted : 2021.07.15
  • Published : 2021.09.30

Abstract

The epipyrone (EPN) biosynthetic gene cluster of Epicoccum nigrum is composed of epnC, epnB, and epnA, which encode cytochrome P450 oxidase, glycosyltransferase, and highly reducing polyketide synthase, respectively. Gene inactivation mutants for epnA, epnB, and epnC were previously generated, and it was found that all of them were incapable of producing EPN and any of its related compounds. It was also reported that epnB inactivation abolished epnA transcription, generating ΔepnAB. This study shows that the introduction of native epnC readily restored EPN production in ΔepnC, suggesting that epnC is essential for polyketide release from EpnA and implies that EpnC works during the polyketide chain assembly of EpnA. Introduction of epnC promoter-epnA restored EPN production in ΔepnA. The ΔepnB genotype was prepared by introducing the epnA expression vector into ΔepnAB, and it was found that the resulting recombinant strain did not produce any EPN-related compounds. A canonical epnB inactivation strain was also generated by deleting its 5'-end. At the deletion point, an Aspergllus nidulans gpdA promoter was inserted to ensure the transcription of epnA, which is located downstream of epnB. Examination of the metabolite profile of the resulting ΔepnB mutant via LC-mass spectrometry verified that no EPN-related compound was produced in this strain. This substantiates that C-glycosylation by EpnB is a prerequisite for the release of EpnA-tethered product. In conclusion, it is proposed that cytochrome P450 oxidase and glycosyltransferase work in concert with polyketide synthase to generate EPN without the occurrence of any free intermediates.

Keywords

Acknowledgement

This research was supported by Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education (NRF-2016R1D1A1B02009237).

References

  1. van Ginkel R, Selwood AI, Wilkins AL, Ford S, Calder C (2012) Antimicrobial compositions. US Patent 20120108526A1 May 2012
  2. Peng J, Jiao J, Li J, Wang W, Gu Q, Zhu T, Li D (2012) Pyronepolyene C-glucosides with NF-κB inhibitory and anti-influenza A viral (H1N1) activities from the sponge-associated fungus Epicoccum sp. JJY40. Bioorg Med Chem Lett 22: 3188-3190. doi: 10.1016/j.bmcl.2012.03.044
  3. Shu YZ, Ye Q, Li H, Kadow KF, Hussain RA, Huang S, Gustavson DR, Lowe SE, Chang LP, Pirnik DM, Kodukula K (1997) Orevactaene, a novel binding inhibitor of HIV-1 rev protein to Rev response element (RRE) from Epicoccum nigrum WC47880. Bioorg Med Chem Lett 7: 2295-2298. doi: 10.1016/S0960-894X(97)00407-1
  4. Kimura J, Furui M, Kanda M, Sugiyama M (2002) Telomerase inhibitor. Japan Patent 2002047281A Feb 2002
  5. Hufendiek P (2017) Enzyme-inhibitory secondary metabolites and their exudation in the marine-derived fungus Epicoccum nigrum link. Dissertation, Rheinische Friedrich-Wilhelms-Universitat Bonn
  6. Preindl J, Schulthoff S, Wirtz C, Lingnau J, Furstner A (2017) Polyunsaturated C-glycosidic 4-hydroxy-2-pyrone derivatives: Total synthesis shows that putative orevactaene is likely identical with epipyrone A. Angew Chem Int Ed Engl 56: 7525-7530. doi: 10.1002/anie.201702189
  7. Hopwood DA, Sherman DH (1990) Molecular genetics of polyketides and its comparison to fatty acid biosynthesis. Ann Rev Genet 24: 37-62. doi: 10.1146/annurev.ge.24.120190.000345
  8. Staunton J, Weissman KJ (2001) Polyketide biosynthesis: a millennium review. Nat Prod Rep 18: 380-416. doi: doi.org/10.1039/A909079G
  9. Hertweck C (2009) The biosynthetic logic of polyketide diversity. Angew Chem Int Ed Engl 48: 4688-4716. doi: 10.1002/anie.200806121
  10. Cox RJ (2007) Polyketides, proteins and genes in fungi: programmed nano-machines begin to reveal their secrets. Org Biomol Chem 5: 2010-2026. doi: 10.1039/b704420h
  11. Chooi YH, Tang Y (2012) Navigating the fungal polyketide chemical space: from genes to molecules. J Org Chem 77: 9933-9953. doi: 10.1021/jo301592k
  12. Lim YJ, Choi EH, Park SH, Kwon HJ (2020) Genetic localization of the orevactaene/epipyrone biosynthetic gene cluster in Epicoccum nigrum. Bioorg Med Chem Lett 30: 127242 doi:10.1016/j.bmcl.2020.127242
  13. Michielse CB, Hooykaas PJ, van den Hondel CA, Ram AF (2008) Agrobacterium-mediated transformation of the filamentous fungus Aspergillus awamori. Nat Protoc 3: 1671-1678. doi: 10.1038/nprot.2008.154
  14. de Groot MJ, Bundock P, Hooykaas PJ, Beijersbergen AG (1998) Agrobacterium tumefaciens-mediated transformation of filamentous fungi. Nat Biotechnol. 16: 839-842. doi: 10.1038/nbt0998-839
  15. Greule A, Stok JE, Voss JD, Cryle M (2018). Unrivalled diversity: the many roles and reactions of bacterial cytochromes P450 in secondary metabolism. Nat Prod Rep 35: 757-791 https://doi.org/10.1039/C7NP00063D
  16. Fujii I, Yoshida N, Shimomaki S, Oikawa H, Ebizuka Y (2005) An iterative type I polyketide synthase PKSN catalyzes synthesis of the decaketide alternapyrone with regio-specific octa-methylation. Chem Biol 12: 1301-1309. doi: 10.1016/j.chembiol.2005.09.015
  17. Kasahara K, Fujii I, Oikawa H, Ebizuka (2006) Expression of Alternaria solani PKSF generates a set of complex reduced-type polyketides with different carbon-lengths and cyclization. ChemBioChem 7: 920-924. doi: 10.1002/cbic.200600034
  18. Hashimoto M, Nonaka T, Fujii I (2014) Fungal type III polyketide synthases. Nat Prod Rep 31: 1306-1317. doi: 10.1039/c4np00096j
  19. Gowda M, Li H, Wang GL (2007) Robust analysis of 5'-transcript ends: a high-throughput protocol for characterization of sequence diversity of transcription start sites. Nat Protoc 2: 1622-1632. doi: 10.1038/nprot.2007.242