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Biochemical and cultural characteristics of mineral-solubilizing Acinetobacter sp. DDP346

미네랄 가용화능을 갖는 Acinetobacter sp. DDP346의 생화학적 및 배양학적 특성

  • Received : 2021.07.22
  • Accepted : 2021.09.23
  • Published : 2021.12.31

Abstract

In this study, to select strains suitable as microbial agent from among rhizosphere microorganisms present in rhizosphere soil and roots, the mineral solubilization ability, antifungal activity against 10 types of plant pathogenic fungi, and plant growth-promoting activity of rhizosphere microorganisms were evaluated. As a result, DDP346 was selected because it has solubilization ability of phosphoric acid, calcium carbonate, silicon, and zinc; nitrogen fixing ability; production ability of siderophore, indole-3-acetic acid, and aminocyclopropane-1-carboxylate deaminase; and antifungal activity against seven types of plant pathogenic fungi. DDP346 showed a 99.9% homology with Acinetobacter pittii DSM 21653 (NR_117621.1); phylogenetic analysis also revealed a close relationship with Acinetobacter pittii based on the 16S rRNA base sequence. The growth conditions of DDP346 were identified as temperatures in the range of 10-40 ℃, pH in the range of 5-11, and salt concentrations in the range of 0-5%. In addition, a negative correlation coefficient (r2 = -0.913, p <0.01) was shown between pH change and the solubilized phosphoric acid content of Acinetobacter sp. DDP346, and this is assumed to be due to the organic acid generated during culture. Consequently, through the evaluation of its mineral solubilization ability, antifungal activity against plant pathogenic fungi, and plant growth-promoting activity, the potential for the utilization of Acinetobacter sp. DDP346 as a multi-purpose microbial agent is presented.

본 연구는 근권 토양 및 뿌리에 존재하는 근권 미생물 중 미생물 제제로 적합한 균주를 선별하기 위해서 미네랄 가용화능, 10종의 식물 병원성 곰팡이에 대한 항진균 활성 및 식물 생장 촉진 활성을 평가하였다. 결과적으로 불용성 인산, 탄산칼슘, 규소 및 아연 가용화능과 질소고정능, siderophore, indole-3-acetic acid와 aminocyclopropane-1-carboxylate deaminase 생성능 및 7종의 식물 병원성 곰팡이에 대해 항진균 활성을 갖는 DDP346을 선별하였다. 선별된 DDP346은 Acinetobacter pittii DSM21653 (NR_117621.1)와 99.9% 이상의 높은 상동성을 보였으며, 16S rRNA 염기서열을 바탕으로 계통도를 분석한 결과에서도 Acinetobacter pittii와 높은 유연관계를 나타내었다. DDP346의 생장 조건은 온도(10-40 ℃), pH (5-11) 염농도(0-5%) 범위로 확인하였다. 또한 pH 변화와 가용화된 인산 함량 간에 음의 상관계수(r2= -0.913, p <0.01)를 나타내는 것을 확인하였는데, 이는 배양 중에 생성되는 유기산에 의한 것으로 추정된다. 결과적으로 미네랄 가용화능, 식물 병원성 곰팡이에 대한 항진균 활성 및 식물 생장 촉진 활성 평가를 통해 Acinetobacter sp. DDP346을 다목적 미생물 제제로써 활용 가능성을 제시한다.

Keywords

References

  1. Basu A, Prasad P, Das SN, Kalam S, Sayyed RZ, Reddy MS, El Enshasy H (2021) Plant growth promoting rhizobacteria (PGPR) as green bioinoculants: recent developments, constraints, and prospects. Sustainability 13: 1140. doi: 10.3390/su13031140
  2. Santoyo G, Urtis-Flores CA, Loeza-Lara PD, Orozco-Mosqueda M, Glick BR (2021) Rhizosphere colonization determinants by plant growth-promoting rhizobacteria (PGPR). Biology 10: 475. doi: 10.3390/biology10060475
  3. Gupta A, Bano A, Rai S, Dubey P, Khan F, Pathak N (2020) Plant growth promoting rhizobacteria (PGPR): a sustainable agriculture to rescue the vegetation from the effect of biotic stress: a review. Lett Appl NanoBioScience 10: 2459-2465. doi: 10.1080/17429145.2013.779035
  4. Etesami H, Adl SM (2020) Plant growth-promoting rhizobacteria (PGPR) and their action mechanisms in availability of nutrients to plants. In: Kumar M, Kumar V, Prasad R (ed). Phyto-microbiome in stress regulation. Berlin/Heidelberg, Germany, pp 147-203
  5. Olanrewaju OS, Glick BR, Babalola OO (2017) Mechanisms of action of plant growth promoting bacteria. World J Microbiol Biotechnol 33: 197. doi: 10.1007/s11274-017-2364-9
  6. Han JH, Shim HS, Shin JH, Kim KS (2015) Antagonistic activities of Bacillus spp. strains isolated from tidal flat sediment towards anthracnose pathogens Colletotrichum acutatum and C. gloeosporioides in South Korea. Plant Pathol J 31: 165-175. doi: 10.5423/PPJ.OA.03.2015.0036
  7. Kumawat N, Kumar R, Khandkar U, Yadav R, Saurabh K, Mishra J, Dotaniya M, Hans H (2019) Silicon (Si)- and Zinc (Zn)-solubilizing microorganisms: role in sustainable agriculture. In: Giri B, Prasad R, Wu QS, Varma A (ed) Biofertilizers for sustainable agriculture and environment. Soil Biology. Springer, Switzerland AG. pp 109-135
  8. Jung JJ, Park WJ (2015) Acinetobacter species as model microorganisms in environmental microbiology: current state and perspectives. Appl Microbiol Biotechnol 99: 2533-2548. doi: 10.1007/s00253-015-6439-y
  9. Khan SA, Hamayun M, Yoon HJ, Kim HY, Suh SJ, Hwang SK, Kim JM, Lee IJ, Choo YS, Yoon UH, Kong WS, Lee BM, Kim JG (2008) Plant growth promotion and Penicillium citrinum. BMC Microbiol 8: 231. doi: 10.1186/1471-2180-8-231
  10. Pande A, Pandey P, Mehra S, Singh M, Kaushik S (2017) Phenotypic and genotypic characterization of phosphate solubilizing bacteria and their efficiency on the growth of maize. J Genet Eng Biotechnol 15: 379-391. doi: 10.1016/j.jgeb.2017.06.005
  11. Tamilselvi SM, Thiyagarajan C, Uthandi S (2016) Calcite dissolution by Brevibacterium sp. SOTI06: a futuristic approach for the reclamation of calcareous sodic soils. Front Plant Sci. 7: 1828. doi: 10.3389/fpls.2016.01828
  12. Kang SM, Waqas M, Shahzad R, You YH, Asaf S, Khan MA, Lee KE, Joo GJ, Kim SJ, Lee IJ (2017) Isolation and characterization of a novel silicate-solubilizing strain Burkholderia eburnea CS4-2 that promotes growth of japonica rice (Oryza sativa L. cv. Dongjin). J Soil Sci Plant Nutr 63: 233-241. doi: 10.1080/00380768.2017.1314829
  13. Ranmesh A, Sharma SK, Sharma MP, Yadav N, Joshi OP (2014) Inoculation of zinc solubilizing Bacillus aryabhattai strains for improved growth, mobilization and biofortification of zinc in soybean and wheat cultivated in vertisols of central India. Appl Soil Ecol 73: 87-96. doi: 10.1016/j.apsoil.2013.08.009
  14. Kim HS, Kim JY, Lee SM, Park HJ, Lee SH, Jang JS, Lee MH (2019) Isolation and characterization of indole-3-acetic acid and 1-aminocylopropane-1-carboxylyic acid deaminase-producing bacteria related to environmental Stress. Microbiol Biotechnol Lett 47: 390-400. doi: 10.4014/mbl.1904.04002
  15. Um YR, Kim BR, Jeong JJ, Chung CM, Lee Y (2014) Identification of endophytic bacteria in Panax ginseng seeds and their potential for plant growth promotion. Korean J Med Crop Sci 22: 306-312. doi: 10.7783/KJMCS.2014.22.4.306
  16. Milagres AMF, Machuca A, Napoleao D (1999) Detection of siderophore production from several fungi and bacteria by a modification of chrome azurol S (CAS) agar plate assay. J Microbiol Methods 37: 1-6. doi: 10.1016/s0167-7012(99)00028-7
  17. Leveau JHJ, Lindow SE (2005) Utilization of the plant hormone indole-3-acetic acid for growth by Pseudomonas putida strain 1290. Appl Environ Microbiol 71: 2365-2371. doi: 10.1128/AEM.71.5.2365-2371.2005
  18. Barnawal D, Bharti N, Maji D, Chanotiya C, Kalra A (2014) ACC deaminase-containing Arthrobacter protophormiae induces NaCl stress tolerance through reduced ACC oxidase activity and ethylene production resulting in improved nodulation and mycorrhization in Pisum sativum. J Plant Physiol 171: 884-894. doi: 10.1016/j.jplph.2014.03.007
  19. Lee KH, Song HG (2007) Growth promotion of tomato seedlings by application of Bacillus sp. isolated from rhizosphere. Korean J Microbiol 43: 279-284
  20. Park JH, Han CH, Yoon MH (2017) Synergistic effect of phosphate solubilization by Burkholderia strains isolated from button mushroom bed. J Mushrooms 15: 183-189. doi: 10.14480/JM.2017.15.4.183
  21. Miller GL (1959) Use of dinitrosalicylic acid reagent for determination of reducing sugar. Anal Chem 31: 426-428. doi: 10.1021/ac60147a030
  22. Shin PY, Cho SJ (2011) Cellulase and xylanase activity of compost-promoting bacteria Bacillus sp. SJ21. Korean J Soil Sci Fert 44: 836-840. doi: 10.7745/KJSSF.2011.44.5.836
  23. Oh DG, Jang YK, Woo JE, Kim JS, Lee CH (2016) Metabolomics reveals the effect of garlic on antioxidant- and protease-activities during Cheonggukjang (fermented soybean paste) fermentation. Food Res Int 82: 86-94. doi: 10.1016/j.foodres.2016.01.019
  24. Rodriguez PA, Rothballer M, Chowdhury SP, Nussbaumer T, Gutjahr C, Falter-Braum P (2019) Systems biology of plant-microbiome interactions. Molecular Plant 12: 804-821. doi: 10.1016/j.molp.2019.05.006
  25. Zarraonaindia I, Owens SM, Weisenhorn P, West K, Hampton-Marcell J, Lax S, Bokulich NA, Mills DA, Martin G, Taghavi S, van der Leli D, Gilber JA (2015) The soil microbiome influences grapevine-associated microbiota. mBio 6: e02527-14. doi: 10.1128/mBio.02527-14
  26. Penroe DM, Glick BR (2003) Methods for isolating and characterizing ACC deaminase-containing plant growth-promoting rhizobacteria. Physiol Plant 118: 10-15. doi: 10.1034/j.1399-3054.2003.00086.x
  27. Lee SM, Chung JH, Ryu CM (2015) Augmenting plant immune responses and biological control by microbial determinants. Res Plant Dis 21: 161-179. doi: 10.5423/RPD.2015.21.3.161
  28. Aloo BN, Makumba BA, Mbega ER (2019) The potential of bacilli rhizobacteria for sustainable crop production and environmental sustainability. Microbiol Res 219: 26-39. doi: 10.1016/j.micres.2018.10.011
  29. Danish S, Zafar-ul-Hye M, Mohsin F, Hussain M (2020) ACC-deaminase producing plant growth promoting rhizobacteria and biochar mitigate adverse effects of drought stress on maize growth. PLoS One 15: e0230615. doi: 10.1371/journal.pone.0230615
  30. Vimal SR, Patel VK, Singh JS (2019) Plant growth promoting Curtobacterium albidum strain SRV4: an agriculturally important microbe to alleviate salinity stress in paddy plants. Ecol Indic 105: 553-562. doi: 10.1016/j.ecolind.2018.05.014
  31. Suleman M, Yasmin S, Rasul M, Yahya M, Atta BM, Mirza MS (2018) Phosphate solubilizing bacteria with glucose dehydrogenase gene for phosphorus uptake and 500 beneficial effects on wheat. PLoS One 13: e0204408. doi: 10.1371/journal.pone.0204408
  32. El-Gibaly MH, Reweiny FM, Abdel-Nasser M, El-Dahtory TA (1977) Studies on phosphate-solubilizing bacteria in soil and dissolvers and their morphological grouping. Zlb Bakt II Abt Bd 132: 240-244. doi: 10.1016/s0044-4057(77)80007-5
  33. Park KH, Park HW, Lee SW, Lee SH, Myung KS, Lee SY, Song JK, Kim YT, Park KS, Kim YO (2016) Isolation and characterization of Bacillus species having antifungal activity against pathogens of ginseng damping off. Korean J Pestic Sci 20: 380-387. doi: 10.7585/kjps.2016.20.4.380