The Korean Journal of Mycology (한국균학회지)

The Korean Society of Mycology (한국균학회)
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Pezizomycotina (Ascomycota) Fungi Isolated from Freshwater Environments of Korea: Cladorrhinum australe, Curvularia muehlenbeckiae, Curvularia pseudobrachyspora, and Diaporthe longicolla

  • Nam, Bora (Department of Biology, Kunsan National University) ;
  • Lee, Jae Sung (Department of Biology, Kunsan National University) ;
  • Lee, Hyang Burm (Division of Food Technology, Biotechnology & Agrochemistry, Chonnam National University) ;
  • Choi, Young-Joon (Department of Biology, Kunsan National University)
  • Received : 2020.01.08
  • Accepted : 2020.03.24
  • Published : 2020.03.31
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Abstract

Fungi are ubiquitous and indispensable components of nearly all ecosystems on earth, including freshwater environments. A survey of fungal diversity in freshwater environments of Korea led to the identification of four unrecorded Pezizomycotina (Ascomycota) species in 2016 and 2017, based on morphology and molecular phylogeny; these included Cladorrhinum australe, Curvularia muehlenbeckiae, Curvularia pseudobrachyspora (Dothideomycetes), and Diaporthe longicolla (Sordariomycetes).

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References

  1. Grossart HP, Van den Wyngaert S, Kagami M, Wurzbacher C, Cunliffe M, Rojas-Jimenez K. Fungi in aquatic ecosystems. Nature Reviews Microbiology 2019;17(6):339-54. https://doi.org/10.1038/s41579-019-0175-8
  2. Taylor JD, Cunliffe M. Multi-year assessment of coastal planktonic fungi reveals environmental drivers of diversity and abundance. The Isme Journal 2016;10:2118. https://doi.org/10.1038/ismej.2016.24
  3. Monchy S, Sanciu G, Jobard M, Rasconi S, Gerphagnon M, Chabe M, Cian A, Meloni D, Niquil N, Christaki U, et al. Exploring and quantifying fungal diversity in freshwater lake ecosystems using rDNA cloning/sequencing and SSU tag pyrosequencing. Environ Microbiol 2011;13(6):1433-53. https://doi.org/10.1111/j.1462-2920.2011.02444.x
  4. Shearer CA, Descals E, Kohlmeyer B, Kohlmeyer J, Marvanova L, Padgett D, Porter D, Raja HA, Schmit JP, Thorton HA. Fungal biodiversity in aquatic habitats. Biodivers Conserv 2007;16(1):49-67. https://doi.org/10.1007/s10531-006-9120-z
  5. Heo I, Hong K, Yang H, Lee HB, Choi YJ, Hong SB. Diversity of Aspergillus, Penicillium, and Talaromyces species isolated from freshwater environments in Korea. Mycobiology 2019;47(1):12-9. https://doi.org/10.1080/12298093.2019.1572262
  6. Nguyen TTT, Lee HS, Jeon JS, Lee BH. First records of rare Ascomycete fungi, Acrostalagmus luteoalbus, Bartalinia robillardoides, and Collariella carteri from freshwater samples in Korea. Mycobiology 2019;47(1):1-11. https://doi.org/10.1080/12298093.2018.1550894
  7. Goh J, Nam B, Lee JS, Mun HY, Oh Y, Lee HB, Chung N, Choi Yj. First report of six Trichoderma species isolated from freshwater environment in Korea. The Korean Journal of Mycology 2018;46(3):213-25. https://doi.org/10.4489/KJM.20180027
  8. Lee SH, Park HS, Nguyen TT, Lee HB. Characterization of three species of Sordariomycetes isolated from freshwater and soil samples in Korea. Mycobiology 2019;47(1):20-30. https://doi.org/10.1080/12298093.2019.1574372
  9. Choi YJ, Lee SH, Nguyen TTT, Nam B, Lee HB. Characterization of Achlya americana and A. bisexualis (Saprolegniales, Oomycota) Isolated from freshwater environments in Korea. Mycobiology 2019;47(2):135-42. https://doi.org/10.1080/12298093.2018.1551855
  10. Nam B, Choi YJ. Phytopythium and Pythium species (Oomycota) isolated from freshwater environments of Korea. Mycobiology 2019;47(3):261-72. https://doi.org/10.1080/12298093.2019.1625174
  11. Madrid H, da Cunha KC, Gene J, Dijksterhuis J, Cano J, Sutton DA, Guarro J, Crous PW. Novel Curvularia species from clinical specimens. Persoonia: Molecular Phylogeny and Evolution of Fungi 2014;33:48-60. https://doi.org/10.3767/003158514X683538
  12. Carmaran CC, Berretta M, Martinez S, Barrera V, Munaut F, Gasoni L. Species diversity of Cladorrhinum in Argentina and description of a new species, Cladorrhinum australe. Mycol Prog 2015;14(10):94. https://doi.org/10.1007/s11557-015-1106-3
  13. Udayanga D, Liu X, McKenzie EHC, Chukeatirote E, Bahkali AHA, Hyde KD. The genus Phomopsis: Biology, applications, species concepts and names of common phytopathogens. Fungal Diversity 2011;50(1):189. https://doi.org/10.1007/s13225-011-0126-9
  14. White TJ, Bruns T, Lee S, Taylor J. Amplification and direct sequencing of fungal ribosomal rna genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR Protocols: A Guide to Methods and Applications. New York: Academic Press, Inc; 1990. p. 315-22.
  15. Berbee ML, Pirseyedi M, Hubbard S. Cochliobolus phylogenetics and the origin of known, highly virulent pathogens, inferred from ITS and glyceraldehyde-3-phosphate dehydrogenase gene sequences. Mycologia 1999;91(6):964-77. https://doi.org/10.2307/3761627
  16. Katoh K, Standley DM. MAFFT Multiple sequence alignment software version 7: Improvements in performance and usability. Mol Biol Evol 2013;30(4):772-80. https://doi.org/10.1093/molbev/mst010
  17. Katoh K, Toh H. Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework. BMC Bioinformatics 2008;9:212. https://doi.org/10.1186/1471-2105-9-212
  18. Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: Molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 2013;30(12):2725-9. https://doi.org/10.1093/molbev/mst197
  19. Farr DF, Rossman AY. Fungal Databases, Systematic Mycology and Microbiology Laboratory. ARS, USDA, 2020.
  20. Marin-Felix Y, Senwanna C, Cheewangkoon R, Crous PW. New species and records of Bipolaris and Curvularia from Thailand. Mycosphere 2017;8(9):1556-74. https://doi.org/10.5943/mycosphere/8/9/11
  21. Srivastava AK, Saroj A, Nishad I, Samad A. First report of Acorus calamus leaf spot caused by Curvularia pseudobrachyspora in India. Plant Dis 2019;103(4):767. https://doi.org/10.1094/PDIS-08-18-1399-PDN
  22. Wang H, Xu L, Zhang Z, Lin J, Huang X. First report of Curvularia pseudobrachyspora causing leaf spots in Areca catechu in China. Plant Dis 2019;103(1):150.
  23. Santos JM, Vrandecic K, Cosic J, Duvnjak T, Phillips AJL. Resolving the Diaporthe species occurring on soybean in Croatia. Persoonia 2011;27:9-19. https://doi.org/10.3767/003158511X603719
  24. Udayanga D, Castlebury LA, Rossman AY, Chukeatirote E, Hyde KD. The Diaporthe sojae species complex: Phylogenetic re-assessment of pathogens associated with soybean, cucurbits and other field crops. Fungal Biology 2015;119(5):383-407. https://doi.org/10.1016/j.funbio.2014.10.009
  25. Sun S, Kim MY, Chaisan T, Lee YW, Van K, Lee SH. Phomopsis (Diaporthe) species as the cause of soybean seed decay in Korea. J Phytopathol 2013;161(2):131-4. https://doi.org/10.1111/jph.12034