미생물학회지 (Korean Journal of Microbiology)

  • 제55권2호
  • /
  • Pages.174-176
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  • 2019
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  • 0440-2413(pISSN)
  • /
  • 2383-9902(eISSN)
한국미생물학회 (The Microbiological Society of Korea)
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해수 순환여과양식시스템에서 분리된 Flavobacteriaceae 균주 KCTC 52651의 유전체 분석

Complete genome sequence of Flavobacteriaceae strain KCTC 52651 isolated from seawater recirculating aquaculture system

  • Kim, Young-Sam (Department of Microbiology, Pukyong National University) ;
  • Jeon, Young Jae (Department of Microbiology, Pukyong National University) ;
  • Kim, Kyoung-Ho (Department of Microbiology, Pukyong National University)
  • 투고 : 2019.05.02
  • 심사 : 2019.05.07
  • 발행 : 2019.06.30
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초록

Flavobacteriaceae 과에 속하는 신균주인 RR4-38(= KCTC 52651 = DSM 108068)가 한국의 해수 순환여과양식시스템의 생물여과조에서 분리되었다. 41.9%의 G+C 함유량을 가진 3,182,272 bp의 길이의 하나의 완전한 유전체 컨티그가 PacBio RS II를 이용하여 얻어졌다. 이 유전체는 2,829개의 단백질 암호화 유전자와 6개의 rRNA 유전자, 38개 tRNA 유전자, 4개의 ncRNA 유전자, 9개의 유사유전자를 포함하고 있다. 이 결과는 해수 순환여과양식시스템에서 미생물의 활성을 이해하는데 통찰력을 줄 것이다.

A novel bacterium, designated strain RR4-38 (= KCTC 52651 = DSM 108068), belonging to the family Flavobacteriaceae was isolated from a biofilter in the seawater recirculating aquaculture system in South Korea. A single complete genome contig which is 3,182,272 bp with 41.9% G+C content was generated using PacBio RS II platform. The genome includes 2,829 protein-coding genes, 6 rRNA genes, 38 tRNA genes, 4 non-coding RNA genes, and 9 pseudogenes. The results will provide insights for understanding microbial activity in the seawater recirculating aquaculture system.

키워드

MSMHBQ_2019_v55n2_174_f0001.png 이미지

Fig. 1. Complete genome map of Flavobacteriaceae sp. RR4-38.

Table 1. General genomic features of Flavobacteriaceae sp. RR4-38

MSMHBQ_2019_v55n2_174_t0001.png 이미지

참고문헌

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피인용 문헌

  1. Pukyongia salina gen. nov., sp. nov., a novel genus in the family Flavobacteriaceae vol.58, pp.6, 2019, https://doi.org/10.1007/s12275-020-9310-5