Mycobiology

  • 제47권4호
  • /
  • Pages.355-367
  • /
  • 2019
  • /
  • 1229-8093(pISSN)
  • /
  • 2092-9323(eISSN)
한국균학회 (The Korean Society of Mycology)
권호 표지
DOI QR코드

DOI QR Code

Arthonia dokdoensis and Rufoplaca toktoana - Two New Taxa from Dokdo Islands (South Korea)

  • 투고 : 2018.12.06
  • 심사 : 2019.10.28
  • 발행 : 2019.12.01
PDF 다운로드
⟨ 이전 논문 다음 논문 ⟩

초록

Arthonia dokdoensis sp. nov., a lichenicolous fungus from the subcosmopolitan Arthonia molendoi complex growing on crustose thalli of species of the genus Orientophila (subfamily Xanthorioideae, Teloschistaceae), as well as the lichen species Rufoplaca toktoana sp. nov. (subfamily Caloplacoideae, Teloschistaceae) similar to Rufoplaca kaernefeltiana, both from Dokdo Islands, Republic of Korea, are described, illustrated, and compared with closely related taxa. In the phylogenetic tree of the Arthoniaceae based on 12S mtSSU and RPB2 gene sequences, the phylogenetic position of the A. dokdoensis and the relationship with the A. molendoi group are illustrated, while the position of the newly described R. toktoana is confirmed by phylogenetic tree based on ITS nrDNA data.

키워드

참고문헌

  1. Fleischhacker A, Grube M, Frisch A. Arthonia parietinaria - a common but frequently misunderstood lichenicolous fungus on species of the Xanthoria parietina-group. Fungal Biol. 2016;120(11):1341-1353. https://doi.org/10.1016/j.funbio.2016.06.009
  2. Kondratyuk SY, L}okos L, Upreti DK, et al. New monophyletic branches of the Teloschistaceae (lichen-forming Ascomycota) proved by three gene phylogeny. Acta Bot Hung. 2017;59(1-2):71-136. https://doi.org/10.1556/034.59.2017.1-2.6
  3. Arup U, Sochting U, Froden P. A new taxonomy of the family Teloschistaceae. Nord J Bot. 2013;31:16-83. https://doi.org/10.1111/j.1756-1051.2013.00062.x
  4. Kondratyuk SY, L}okos L, Halda J, et al. New and noteworthy lichen-forming and lichenicolous fungi 6. Acta Bot Hung. 2017;59(1-2):137-260. https://doi.org/10.1556/034.59.2017.1-2.7
  5. Kondratyuk SY, L}okos L, Halda JP, et al. New and noteworthy lichen-forming and lichenicolous fungi 7. Acta Bot Hung. 2018;60(1-2):115-184. https://doi.org/10.1556/034.60.2018.1-2.8
  6. Ertz D, Miadlikowska J, Lutzoni F, et al. Towards a new classification of the Arthoniales (Ascomycota) based on a three-gene phylogeny focussing on the genus Opegrapha. Mycol Res. 2009;113(1):141-152. https://doi.org/10.1016/j.mycres.2008.09.002
  7. Frisch A, Thor G, Ertz D, et al. The Arthonialean challenge: restructuring Arthoniaceae. Taxon. 2014;63(4):727-744. https://doi.org/10.12705/634.20
  8. Schoch CL, Sung GH, Lopez-Giraldez F, et al. The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits. Syst Biol. 2009;58(2):224-239. https://doi.org/10.1093/sysbio/syp020
  9. Frisch A, Thor G, Moon KH, et al. Arthonia incarnata (Arthoniaceae), a rare and poorly known oldgrowth forest lichen new to Asia. Nord J Bot. 2017;35(5):587-594. https://doi.org/10.1111/njb.01560
  10. Ertz D, Tehler A. The phylogeny of Arthoniales (Pezizomycotina) inferred from nucLSU and RPB2 sequences. Fung Divers. 2011;49(1):47-71. https://doi.org/10.1007/s13225-010-0080-y
  11. Tehler A, Irestedt M. Parallel evolution of lichen growth forms in the family Roccellaceae (Arthoniales, Euascomycetes). Cladistics. 2007;23(5):432-454. https://doi.org/10.1111/j.1096-0031.2007.00156.x
  12. Kondratyuk S, Jeong MH, Yu NH, et al. Four new genera of teloschistoid lichens (Teloschistaceae, Ascomycota) based on molecular phylogeny. Acta Bot Hung. 2013;55(3-4):251-274. https://doi.org/10.1556/ABot.55.2013.3-4.8
  13. Kondratyuk SY, Jeong MH, Yu NH, et al. A revised taxonomy of the subfamily Caloplacoideae (Teloschistaceae, Ascomycota) based on molecular phylogeny. Acta Bot Hung. 2014;56(1-2):93-123. https://doi.org/10.1556/ABot.56.2014.1-2.10
  14. Fedorenko NM, Stenroos S, Thell A, et al. A phylogenetic analysis of xanthorioid lichens (Teloschistaceae, Ascomycota) based on ITS and mtSSU sequences. Bibl Lichenol. 2009;100:49-84.
  15. Gaya E, Fernandez-Brime S, Vargas R, et al. The adaptive radiation of lichen-forming Teloschistaceae is associated with sunscreening pigments and a bark-to-rock substrate shift. Proc Natl Acad Sci USA. 2015;112(37):11600-11605. https://doi.org/10.1073/pnas.1507072112
  16. Gaya E, Hognabba F, Holguin A, et al. Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota). Mol Phylogen Evol. 2012;63(2):374-387. https://doi.org/10.1016/j.ympev.2012.01.012
  17. Halici MG, Vondrak J, Demirel R, et al. Teloschistaceae (lichenized Ascomycetes) in Turkey II. Some poorly known taxa. Supported by molecular data. Nova Hedw. 2014;98(3):449-458. https://doi.org/10.1127/0029-5035/2013/0163
  18. Vondrak J, Malicek J. Teloschistaceae of the localities Velka kotlina and Petrovy kameny in the Hruby Jesenik Mts. Bryonora. 2015;56:45-55.
  19. Vondrak J, Ismailov A, Urbanavichus G. Lichens of the family Teloschistaceae in Dagestan, an eastern part of the Caucasian biodiversity hot-spot. Nova hedw. 2017;104(4):483-498. https://doi.org/10.1127/nova_hedwigia/2016/0387
  20. Fedorenko NM, Stenroos S, Thell A, et al. Molecular phylogeny of xanthorioid lichens (Teloschistaceae, Ascomycota), with notes on their morphology. Bibl Lichenol. 2012;108:45-64.
  21. Doyle JJ, Doyle JL. Isolation of plant DNA from fresh tissue. Focus. 1990;12:13-15.
  22. Lawrey JD, Binder M, Diederich P, et al. Phylogenetic diversity of lichen-associated homobasidiomycetes. Mol Phylogen Evol. 2007;44(2):778-789. https://doi.org/10.1016/j.ympev.2006.12.023
  23. Gardes M, Bruns TD. ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Mol Ecol. 1993;2(2):113-118. https://doi.org/10.1111/j.1365-294X.1993.tb00005.x
  24. White TJ, Bruns T, Lee S, et al. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols. 1990;38:315-322.
  25. Vilgalys R, Hester M. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol. 1990;172(8):4238-4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990
  26. Kondratyuk SY, Persson P-E, Hansson M, et al. Upretia, a new caloplacoid lichen genus (Teloschistaceae, Lichen-Forming Ascomycota) from India. Cryptogam Biodiversity and Assessment. 2018;2018(01):22-31.
  27. Liu YJ, Whelen S, Hall BD. Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Mol Biol Evol. 1999;16(12):1799-1808. https://doi.org/10.1093/oxfordjournals.molbev.a026092
  28. Reeb V, Lutzoni F, Roux C. Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory. Mol Phylogen Evol. 2004;32(3):1036-1060. https://doi.org/10.1016/j.ympev.2004.04.012
  29. Park JS, Park SY, Park CH, et al. Taxonomic revision of the lichen genera Pertusaria, Varicellaria, and Variolaria (Pertusariales, Ascomycota) in South Korea. Mycobiology. 2017;45(4):270-285. https://doi.org/10.5941/MYCO.2017.45.4.270
  30. Maddison DR, Maddison WP. MacClade 4: analysis of phylogeny and character evolution, version 4.05. Sunderland (MA): Sinauer; 2002.
  31. Mason-Gamer RJ, Kellogg EA. Testing for phylogenetic conflict among molecular data sets in the Tribe Triticeae (Gramineae). Syst Biol. 1996;45(4):524-545. https://doi.org/10.1093/sysbio/45.4.524
  32. Akaike H. Information theory and an extension of the maximum likelihood principle In: Petrov BN, Casaki F, editors. Second international symposium on information theory. Budapest, Hungary: Akademiai Kiado; 1973. p. 267-281.
  33. Nylander JAA. MrModeltest v.2.2. Uppsala, Sweden: Computer Program Distributed by the Author; 2005.
  34. Swofford DL. PAUP. Phylogenetic Analysis Using Parsimony ( and other methods). Version 4. Sunderland (MA): Sinauer Associates; 1998.
  35. Ronquist F, Huelsenbeck JP. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 2003;19(12):1572-1574. https://doi.org/10.1093/bioinformatics/btg180
  36. Grube M. Arthonia In: Nash III TH, Gries C, Bungartz F, editors. Lichen flora of the greater Sonoran desert region. Vol. 3. Tempe (AZ): Lichens Unlimited, Arizona State University; 2007. p. 51-52.
  37. Kondratyuk SY, Karnefelt I, Thell A, et al. A revised taxonomy of the subfamily Xanthorioideae (Teloschistaceae, Ascomycota) based on molecular phylogeny. Acta Bot Hung. 2014;56(1-2):141-178. https://doi.org/10.1556/ABot.56.2014.1-2.12
  38. Poelt J, Dobeler P. Bryostigma leucodontis nov., gen. et spec., eine neue Flechte mit fast unsichtbaren Fruchtkorpern. Plant Syst Evol. 1979;131(3-4):211-216. https://doi.org/10.1007/BF00984254
  39. Frisch A, Thor G. Crypthonia, a new genus of byssoid Arthoniaceae (lichenised Ascomycota). Mycol Progress. 2010;9(2):281-303. https://doi.org/10.1007/s11557-009-0639-8
  40. Frisch A, Thor G, Sheil D, et al. Four new Arthoniomycetes from Bwindi Impenetrable National Park, Uganda - supported by molecular data. Nova Hedw. 2014;98(3):295-312. https://doi.org/10.1127/0029-5035/2013/0155
  41. Frisch A, Ohmura Y, Ertz D, et al. Inoderma and related genera in Arthoniaceae with elevated white pruinose pycnidia or sporodochia. Lichenologist. 2015;47(4):233-256. https://doi.org/10.1017/S0024282915000201
  42. Aptroot A, Ertz D, Silva JDR, et al. The phylogenetic position of Coniarthonia and the transfer of Cryptothecia miniata to Myriostigma (Arthoniaceae, lichenized ascomycetes). Phytotaxa. 2015;218(2):128-136. https://doi.org/10.11646/phytotaxa.218.2.2
  43. Sundin R, Frisch A, Thor G. A literature review of Arthonia s. lat. Bibl Lichenol. 2012;108:257-290.
  44. Kondratyuk SY, Oxner AN, Khodosovtsev AY. Caloplaca In: Andreev MP, Roms EG, editors. Handbook of the lichens of Russia. 9. Fuscideaceae, Teloschistaceae. Sankt-Peterburg, Russia: Nauka; 2004. p. 38-235.