Fig. 1. Maximum likelihood phylogeny of 29 Korean strains of Acidovorax citrulli with two foreign strains; A. citrulli CC1 and CC2 types (Feng et al., 2009) and two Acidovorax spp. as the outgroup. The tree was constructed from 1,823 bp using four genes: pilT, gltA, ugpB and phaC. Bootstrap values with 1,000 replicates for the major divisions of A. citrulli from the outgroups. C, cucumber; M, melon; W, watermelon; P, pumpkin.
Fig. 2. Cluster analysis of Acidovorax citrulli strains and A. valerianella 12066 based on DNA fingerprint profiles generated by polymerase chain reaction (PCR) amplification of repetitive elements and universal rice primers (URP) primers. Distance matrix data was generated using Dice’s (1945) coefficient of similarity and the dendrogram was constructed using the unweighted pairwise group method with arithmetic mean (UPGMA) algorithm. C, cucumber; M, melon; W, watermelon; P, pumpkin.
Supplementary Fig 1. Representative DNA fingerprinting by four universal rice primers-polymerase chain reaction (URP-PCR) and two repetitive elements amplification of Acidovorax citrulli strains. M; 100 bp plus DNA ladder, Lane 1; 11246, 2; 11247, 3; 11248, 4; 14194, 5; 14201, 6; 14202, 7; 12091, 8; 12158, 9; 14222, 10; 11147, 11; 11162, 12; 11163, 13; 11164, 14; 11165, 15; 11201, 16; 11251, 17; 11259, 18; 12089, 19; 12090, 20; 13034, 21; 13211, 22; 17005, 23; 17912, 24; 13255, 25; 11171, 26; 12170, 27; 13217, 28; 14236, 29; 17913 of A. citrulli and 30; A. valerianella 12066.
Table 1. Host, geographic origin and multi-locus genotypes of Acidovorax citrulli strains isolated from cucurbit cultivation felds in Korea.
Table 2. Comparison of DNA variation sites for six genes of Korean KCC1 and KCC2 groups with two foreign groups of Acidovorax citrulli.
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피인용 문헌
- Development of Molecular Markers for Detection of Acidovorax citrulli Strains Causing Bacterial Fruit Blotch Disease in Melon vol.20, pp.11, 2018, https://doi.org/10.3390/ijms20112715