References
- Anuppalle, M., Maddirevula, S., Huh, T.R., and Rhee, M. (2013). Ubiquitin proteasome system networks in the neurological disorder. Anim. Cells Syst. 17, 383-387. https://doi.org/10.1080/19768354.2013.855256
- Anuppalle, M., Maddirevula, S., Kumar, A., Huh, T.L., Choe, J., and Rhee, M. (2017). Notch and retinoic acid signaling are required for the spatiotemporal distribution of prune2 mRNA in the zebrafish embryonic development. Gene Exp. Patterns. 11, 23-24:45-51.
-
Banote, R.K., Edling, M., Eliassen, F., Kettunen, P., Zetterberg, H., and Abramsson, A., (2016).
${\beta}$ -Amyloid precursor protein-b is essential for Mauthner cell development in the zebrafish in a Notchdependent manner. Dev. Biol. 413, 26-38. https://doi.org/10.1016/j.ydbio.2016.03.012 - Chen, W.B., and Corliss, D.C. (2004). Three modules of zebrafish Mind bomb work cooperatively to promote Delta ubiquitination and endocytosis. Dev. Biol. 267, 361-373. https://doi.org/10.1016/j.ydbio.2003.11.010
- Deng, L., Jiang, C., Chen, L., Jin, J., Wei, J., Zhao, L., Chen, M., Pan, W., Xu, Y., Chu, H., et al. (2015). The ubiquitination of RagA GTPase by RNF152 negatively regulates mTORC1 activation. Mol. Cell 58, 804-818. https://doi.org/10.1016/j.molcel.2015.03.033
- Garza-Lombo, C., and Gonsebat, M.E. (2016). Mammalian target of rapamycin: its role in early neural development and in adult and aged brain function. Front. Cell. Neurosci. 10, 157. doi: 10.3389/fncel.2016.00157.
- Hartman, N.W., Lin, T.V., Zhang, L., Paquelet, G.E., Feliciano, D.M., and Bordey, A. (2013). mTORC1 targets the translational repressor 4E-BP2, but not S6 kinase 1/2, to regulate neural stem cell selfrenewal in vivo. Cell Rep. 5, 433-444. doi: 10.1016/j.celrep.2013.09.017.
- Hegde, A., Qiu, N.C., Qiu, X.H., Ho, S.H., Tay, K.Q., George, J., Ng, F.S., Govindarajan, K.R., Gong, Z.Y., Mathavan, S., et al. (2008). Genomewide expression analysis in zebrafish mind bomb alleles with pancreas defects of different severity identifies putative notch responsive genes. PLos One 3, e1479. https://doi.org/10.1371/journal.pone.0001479
- Hwang, J., Kim, H.S., Seok, J.W., Kim, J.D., Koun, S., Park, S.Y., Lee, J., Kim, K.S., Chang, K.T., Ryoo, Z.Y., et al. (2009). Transcriptome analysis of the zebrafish mind bomb mutant. Mol. Genet. Genomics 281, 77-85. https://doi.org/10.1007/s00438-008-0395-5
- Kang, K., Lee, D., Hong, S., Park, S.G., and Song, M.R., (2013). The E3 Ligase Mind Bomb-1 (Mib1) Modulates Delta-Notch Signaling to Control Neurogenesis and Gliogenesis in the Developing Spinal Cord. J. Biol. Chem. 288, 2580-2592. https://doi.org/10.1074/jbc.M112.398263
- Kimmel, C.B., Ballard, W.W., Kimmel, S.R., Ullmann, B., and Schilling, T.F., (1995). Stages of embryonic development of the zebrafish. Dev. Dyn. 203, 253-310. https://doi.org/10.1002/aja.1002030302
- Kumar, S., Stecher, G., and Tamura, K., (2016). MEGA7: molecular evolutionary genetic analysis version 7.0 for bigger datasets. Mol. Biol. Evol. 33, 1870-1874. https://doi.org/10.1093/molbev/msw054
- Lasky, J.L., and Wu, H., (2005). Notch signaling, brain development, and human disease. Pediatr. Res. 57, 104R-109R. https://doi.org/10.1203/01.PDR.0000159632.70510.3D
- Morreale, F.E., and Walden, H. (2016). Snapshot: types of ubiquitin ligase. Cell 165, 248-248.e1.
- Metzger, M.B., Pruneda, J.N., Klevit, R.E., and Weissman, A.M. (2014). RING-type E3 ligases: Master manipulators of E2 ubiquitinconjugating enzymes and ubiquitination. Biochim. Biophys. Acta. 1843, 47-60. https://doi.org/10.1016/j.bbamcr.2013.05.026
- Mumm, J.S., and Kopan, R. (2000). Notch signaling: from the outside in. Dev Biol 228, 151-165. https://doi.org/10.1006/dbio.2000.9960
- Ochocinska, M.J. and Hitchcock P.F. (2017). Dynamic expression of the basic helix-loop-helix transcription factor NeuroD in the rod and cone photoreceptor lineage in the retina of the embryonic and larval zebrafish. J. Comp. Neurol. 501, 1-12.
- Rauch, G.J., Lyons, D.A., Middendorf, I., Friedlander, B., Arana, N., Reyes, T., and Talbot, W.S. (2003). Submission and curation of gene expression data. ZFIN Direct Data Submission (http://zfin.org).
- Raymond, P.A., Barthel, L.K., Bernardos, R.L., and Perkowski, J.J. (2006). Molecular characterization of retinal stem cells and their niches in adult zebrafish. BMC Dev. Biol. 6, 36 doi:10.1186/1471-213X-6-36.
- Ro, H., Soun, K., Kim, E-J., and Rhee, M. (2004). Novel vector systems optimized for injecting in vitro-synthesized mRNA into zebrafish embryos. Mol. Cells 17, 373-376.
- Ro, H., Hui, T.L., and Rhee, M. (2015), Ubiquitin conjugation system for the body axes specification in vertebrates. Animal Cells Sys. 19, 87-95. https://doi.org/10.1080/19768354.2015.1026399
- Swatek, K.N., and Komander, D. (2016). Ubiquitin modifications. Cell Res. 26, 399-422. https://doi.org/10.1038/cr.2016.39
- Takke, C., Dornseifer, P., v. Weizsacker, E., and Campos-Ortega, J.A. (1999). her4, a zebrafish homologue of the Drosophila neurogenic gene E(spl), is a target of NOTCH signaling. Development 126, 1811-1821.
- Taylor, S.M., Alvarez-Delfin, K., Saade, C.J., Thomas, J.L., Thummel, R., Fadool, J.M., and Hitchcock P.F. (2015). The bHLH transcription factor NeuroD governs photoreceptor genesis and regeneration through Delta-Notch signaling. Invest. Ophthalmol. Vis. Sci. 56, 7496-7515. https://doi.org/10.1167/iovs.15-17616
- Thisse, B., and Thisse, C. (2004). Fast release clones: a high throughput expression analysis. ZFIN Direct Data Submission 2004. Available from: http://zfin.org).
- Thomas, J.L., Ochocinska, M.J., Hitchcock, P.F., and Thummel, R. (2012). Using the Tg(nrd:egfp)/albino Zebrafish Line to Characterize In Vivo Expression of neurod. PLoS One 7, e29128. doi:10.1371/journal.pone.0029128.
- Wettstein, D.A., Turner D.L., and Kintner, C. (1997). The Xenopus homolog of Drosophila Suppressor of Hairless mediates Notch signaling during primary neurogenesis. Development 124, 693-702.
- Weizsacker, E.V. (1994). Molekulargenetische Untersuchungen an sechs Zebrafischgenen mit Homologie zur Enhancer of split-Genfamilie von Drosophila. Inaugural dissertation, Universitat zu Koln.
- Westerfield, M. (2000). The Zebrafish Book. A guide for the laboratory use of Zebrafish (Danio rerio), 4th ed., (University of Oregon Press, Eugene).
- Wright, J.G., Giudicelli F., Soza-Ried, C., Hanisch, A., Ariza-McNaughton, L., and Lewis, J. (2011). DeltaC and DeltaD interact as notch ligands in the zebrafish segmentation clock. Development 138, 2947-2956. https://doi.org/10.1242/dev.066654
- Yang, Y., Kim, A.H., Yamada, T., Wu, B., Bilimoria, P.M., Ikeuchi, Y., Iglesia, N.D.L., Shen, J., and Bonni, A., (2009). A Cdc20-APC Ubiquitin Signaling Pathway Regulates Presynaptic Differentiation. Science 326, 575-578. https://doi.org/10.1126/science.1177087
- Yang, Y., Kim, A.H., and Bonni, A., (2010). The Dynamic ubiquitin ligase duo: Cdh1-APC and Cdc20-APC regulate neuronal morphogenesis and connectivity. Curr. Opin. Neurobiol. 20, 92-99. https://doi.org/10.1016/j.conb.2009.12.004
- Yoo, K.W., Maddirevula, S., Kumar, A., Ro, H., Huh, T.L., and Rhee, M., (2017). Sinup is essential for the integrity of centrosomes and mitotic spindles in zebrafish embryos. Animal Cells Sys. 21, 93-99. https://doi.org/10.1080/19768354.2017.1308438
- Zhou, Z.D., Kumari, U., Xiao, Z.C., and Tan, E.K., (2010). Notch as a molecular switch in neural stem cells. IUBMB Life 62, 618-623. https://doi.org/10.1002/iub.362
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