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Morphological Characteristics and Genetic Diversity Analysis of Platycodon grandiflorum (Jacq.) A. DC Determined Using SSR Markers

도라지 수집종의 형태적 특성과 SSR마커에 의한 유연관계 분석

  • Um, Yurry (Department of Herbal Crop Research, NIHHS, RDA) ;
  • Lee, Yi (Department of Industrial Plant Science and Technology, College of Agriculture, Life and Environment Sciences, Chungbuk National University) ;
  • Jin, Mei-Lan (Department of Herbal Crop Research, NIHHS, RDA) ;
  • Lee, Dae Young (Department of Herbal Crop Research, NIHHS, RDA) ;
  • Lee, Jae Won (Department of Herbal Crop Research, NIHHS, RDA) ;
  • Kim, Geum Soog (Department of Herbal Crop Research, NIHHS, RDA) ;
  • Kim, Chang Kug (Genomics Division, National Institute of Agricultural Sciences, RDA) ;
  • Hong, Chang Pyo (TheragenEtex) ;
  • Kim, Ok Tae (Department of Herbal Crop Research, NIHHS, RDA)
  • 엄유리 (농촌진흥청 국립원예특작과학원 인삼특작부) ;
  • 이이 (충북대학교 농업생명환경대학 특용식물학과) ;
  • ;
  • 이대영 (농촌진흥청 국립원예특작과학원 인삼특작부) ;
  • 이재원 (농촌진흥청 국립원예특작과학원 인삼특작부) ;
  • 김금숙 (농촌진흥청 국립원예특작과학원 인삼특작부) ;
  • 김창국 (농촌진흥청 국립농업과학원 농생명자원부 유전체과) ;
  • 홍창표 (테라젠이텍스) ;
  • 김옥태 (농촌진흥청 국립원예특작과학원 인삼특작부)
  • Received : 2015.10.23
  • Accepted : 2016.01.06
  • Published : 2016.02.28

Abstract

Background : Plant breeding requires the collection of genetically diverse genetic resources. Studies on the characteristics of Platycodon grandiflorum resources have not been carried out so far. The present study was carried out to discriminate P. grandiflorum based on morphological characteristics and genetic diversity using simple sequence repeat (SSR) markers. Methods and Results :We collected 11 P. grandiflorum cultivars: Maries II, Hakone double white, Hakone double blue, Fuji white, Fuji pink, Fuji blue, Astra white, Astra pink, Astra blue, Astra semi-double blue and Jangbaek. Analyses of the morphological characteristics of the collection were conducted for aerial parts (flower, stem and leaf) and underground parts (root). Next, the genetic diversity of all P. grandiflorum resources was analyzed using SSR markers employing the DNA fragment analysis method. We determined that the 11 P. grandiflorum cultivars analyzed could be classified by plant length, leaf number and root characteristic. Based on the genetic diversity analysis, these cultivars were classified into four distinct groups. Conclusions : These findings could be used for further research on cultivar development using molecular breeding techniques and for conservation of the genetic diversity of P. grandiflorum. Moreover, the markers could be used for genetic mapping of the plant and marker-assisted selection for crop breeding.

Keywords

References

  1. Ahn KS, Noh EJ, Zhao HL, Jung SH, Kang SS and Kim YS. (2005). Inhibition of inducible nitric oxide synthase and cyclooxygenase II by Platycodon grandiflorum saponins via suppression of nuclear factor-kB activation in RAW 264.7 cells. Life Sciences. 76:2315-2328. https://doi.org/10.1016/j.lfs.2004.10.042
  2. Choi CY, Kim JY, Kim YS, Chung YC, Seo JK and Jeong HG. (2001). Aqueous extract isolated from Platycodon grandiflorum elicits the release of nitric oxide and tumor ecrosis factor-${\alpha}$ from murine macrophages. International Immunopharmacology. 1:1141-1151. https://doi.org/10.1016/S1567-5769(01)00047-9
  3. Han EH, Son YW, Kim MB, Shin YW, Cho YS and Lee SW. (2014). Establishment of tissue culture and acclimation of white balloon flower(Platycodon grandiflorum DC. cv. Jangback) for the raising of in vitro propagated seedlings. Journal of Plant Biotechnology. 41:134-139. https://doi.org/10.5010/JPB.2014.41.3.134
  4. Jo IH, Bang KH, Kim YC, Kim JU, Shin MR, Moon JY, Noh BS, Hyun DY, Kim DH, Cha SW and Kim HS. (2013). Analysis of mitochondrial DNA sequence and molecular marker development for identification of Panax species. Korean Journal of Medicinal Crop Science. 21:91-96. https://doi.org/10.7783/KJMCS.2013.21.2.91
  5. Kim JH, Seo JW, Byeon JH, Ahn YS, Cha SW and Cho JH. (2014). Morphological characteristics and phylogenetic analysis of Polygonatum species based on chloroplast DNA sequences. Korean of Journal Medicinal Crop Science. 22:489-496. https://doi.org/10.7783/KJMCS.2014.22.6.489
  6. Korea Seed and Variety Service(KSVS). (2000). Variety characteristics of test guideline. Ministry of Agriculture, Food and Rural Affairs. Gimcheon, Korea. p.1-15.
  7. Lee GA, Song JY, Sung JS, Choi YM, Lee JR, Lee SY, Kim CY, Kim YG and Lee MC. (2012). Analysis of population structure and genetic diversity in balloon flower Platycodon grandiflorum(Jacq.) A. DC. germplasm using simple sequence repeat(SSR) markers. Journal of Crop Science and Biotechnology. 15:281-287. https://doi.org/10.1007/s12892-012-0067-1
  8. Lee HY, Kang RH, Kim YS, Chung SI and Yoon YS. (2010). Platycodin D inhibits adipogenesis of 3T3 L1 cells by modulating kruppel like factor 2 and peroxisome proliferator activated receptor gamma. Phytotherapy Research. 24:S161-S167. https://doi.org/10.1002/ptr.3054
  9. Li J, Schulz B and Stich B. (2010). Population structure and genetic diversity in elite sugar beet germplasm investigated with SSR markers. Euphytica. 175:35-42. https://doi.org/10.1007/s10681-010-0161-8
  10. Mabberley DJ. (1987). The plant-book: A portable dictionary of the higher plants. Cambridge University Press. Cambridge, England. p.461.
  11. Ministry of Agriculture, Food and Rural Affairs(MAFRA). (2014). Production performance of industrial crops. Ministry of Agriculture, Food and Rural Affairs. Sejong, Korea. p.28.
  12. Moon BC, Kim WJ, Ji Y, Lee YM and Kim HK. (2013). Genetic diversity of Curcuma genus collected germplasm using analysis of AFLP. Korean Journal of Medicinal Crop Science. 21:455-460. https://doi.org/10.7783/KJMCS.2013.21.6.455
  13. Murashige T and Skoog F. (1962). A revised medium for rapid growth and bio assays with tobacco tissue cultures. Physiologia Plantarum. 15:473-497. https://doi.org/10.1111/j.1399-3054.1962.tb08052.x
  14. Park CG, Bang KH, Kim OT, Jin DC, Kim DH, Sung JS, Seong NS, Park HW and Lee SC. (2007). Development of SCAR marker for discriminating between violet flowered lines and white flowered lines in Chinese bellflower(Platycodon grandiflorum A.). Korean Journal of Medicinal Crop Science. 15:1-5.
  15. Saxena B, Kaur R and Bhardwaj SV. (2011). Assessment of genetic diversity in cabbage cultivars using RAPD and SSR markers. Journal of Crop Science and Biotechnology. 14:191-196. https://doi.org/10.1007/s12892-011-0018-2
  16. Sirithunya P and Ukoskit K. (2010). Population genetic structure and genetic diversity of Jatropha curcas germplasm as investigated by 5'-anchored simple sequence repeat primers. Journal of Crop Science and Biotechnology. 13:147-153. https://doi.org/10.1007/s12892-010-0065-0
  17. Song JY, Lee GA, Yoon MS, Ma KH, Choi YM, Lee JR, Park HJ and Lee MC. (2012). Development and characterization of 22 polymorphic microsatellite markers for the balloon flower Platycodon grandiflorum(Campanulaceae). Genetics and Molecular Research. 11:3263-3266. https://doi.org/10.4238/2012.September.12.9
  18. Vigouroux Y, Mitchell S, Matsuoka Y, Hamblin M, Kresovich S, Smith JSC, Jaqueth J, Smith OS and Doebley J. (2005). An analysis of genetic diversity across the maize genome using microsatellites. Genetics. 169:1617-1630. https://doi.org/10.1534/genetics.104.032086
  19. Wang C, Levis GBS, Lee EB, Levis WR, Lee DW, Kim BS, Park SY and Park E. (2004). Platycodin D and D3 isolated from the root of Platycodon grandiflorum modulate the production of nitric oxide and secretion of TNF-${\alpha}$ in activated RAW 264.7 cells. International immunopharmacology. 4:1039-1049. https://doi.org/10.1016/j.intimp.2004.04.005
  20. Williams JGK, Kubelik AR, Livak KJ, Raafalski JA and Tingey SV. (1990). DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Research. 18:6531-6535. https://doi.org/10.1093/nar/18.22.6531
  21. Zhao HL, Cho KH, Ha YW, Jeong TS, Lee WS and Kim YS. (2006). Cholesterol-lowing effect of platycodin D in hyper cholesterol emic ICR mice. European Journal of Pharmacology. 537:166-173. https://doi.org/10.1016/j.ejphar.2006.03.032