과제정보
연구 과제 주관 기관 : KISTI
참고문헌
- M. Lee, D. Kim, "Large-scale reverse docking profiles and their applications," BMC Bioinformatics, Vol. 13, No. 17, 2012.
- J. Lee, J-W. Choi, J. Shin, K-T. No, "Trends in Computer Aided Drug Discovery, Next Generation," Communications of the Korea Information Science Society, Vol. 31, No. 8, pp. 35-54, 2013.
- Yakup.com, Available: http://goo.gl/xEnUka
- I. Raicu, I. Foster and Y. Zhao, "Many-Task Computing for Grids and Supercomputers," Proc. of the IEEE/ACM Workshop on Many-Task Computing on Grids and Supercomputers (MTAGS'08), 2008.
- I. Raicu, Y. Zhao, C. Dumitrescu, I. Foster, and M.Wilde, "Falkon: a Fast and Light-weight tasK executiON framework," Proc. of the 2007 ACM/ IEEE conference on Supercomputing (SC'07), Nov. 2007.
- J.-S. Kim, S. Rho, S. Kim, S. Kim, S. Kim, and S. Hwang, "HTCaaS: Leveraging Distributed Supercomputing Infrastructures for Large-Scale Scientific Computing," Proc. of the IEEE/ACM 6th Workshop on Many-Task Computing on Clouds, Grids, and Supercomputers (MTAGS'13), Nov. 2013.
- S. Rho, S. Kim, S. Kim, S. Kim, J.-S. Kim, and S. Hwang, "HTCaaS: A Large-Scale High-Throughput Computing by Leveraging Grids, Supercomputers and Cloud," Proc. of the IEEE/ACM International Conference for High Performance Computing, Networking, Storage and Analysis (SC12), Nov. 2012.
- Open Grid Forum Job Submission Description Language [Online]. Available: http://www.gridforum.org/documents/GFD.56.pdf
- Partnership & Leadership for the nationwide Supercomputing Infrastructure [Online]. Available: http:// www.plsi.or.kr/
- Jik-Soo Kim, Seok-Kyoo Kim, Sangwan Kim, Seungwoo Rho, Seoyoung Kim, Soonwook Hwang, "An Analysis of Multi-level Scheduling Mechanism for Large-scale Scientific Computing," Journal of KISS(C): Computing Practices and Letters, Vol. 20, No. 7, pp. 379-385, 2014.
- A. Luckow, M. Santcroos, O. Weidner, A. Merzky, P. Mantha, and S. Jha, "P*: A Model of Pilot- Abstractions," Proc. of the 8th IEEE International Conference on eScience (eScience 2012), Oct. 2012.
- A. Luckow, L. Lacinski, and S. Jha, "SAGA BigJob: An Extensible and Interoperable Pilot-Job Abstraction for Distributed Applications and Systems," Proc. of the 10th IEEE/ACM International Conference on Cluster, Cloud and Grid Computing (CCGrid 2010), May 2010.
- E. Walker, J. P. Gardner, V. Litvin, and E. L. Turner, "Creating Personal Adaptive Clusters for Managing Scientific Jobs in a Distributed Computing Environment," Proc. of the Challenges of Large Applications in Distributed Environments (CLADE' 06), Jun. 2006.
- A. Tsaregorodtsev, M. Bargiotti, N. Brook, A. C. Ramo, G. Castellani, P. Charpentier, C. Cioffi, J. Closier, R. G. Diaz, G. Kuznetsov, Y. Y. Li, R. Nandakumar, S. Paterson, R. Santinelli, A. C. Smith, M. S. Miguelez, and S. G. Jimenez, "DIRAC: a community grid solution," Journal of Physics: Conference Series, Vol. 119, 2008.
- C. Andronis, A. Sharma, V. Virvilis, S. Deftereos, and A. Persidis, "Literature mining, ontologies and information visualization for drug repurposing," Briefings in Bioinformatics, Vol. 12, pp. 357-368, 2011. https://doi.org/10.1093/bib/bbr005
- M. Campillos, M. Kuhn, A. C. Gavin, L. J. Jensen, and P. Bork, "Drug target identification using side-effect similarity," Science, Vol. 321, pp. 263-266, 2008. https://doi.org/10.1126/science.1158140
- M. J. Keiser MJ et al., "Predicting new molecular targets for known drugs," Nature, Vol. 462, pp. 175- 181, 2009. https://doi.org/10.1038/nature08506
- J. T. Dudley, T. Deshpande, and A. J. Butte, "Exploiting drug-disease relationships for computational drug repositioning," Briefings in Bioinformatics, Vol. 12, pp. 303-311, 2011. https://doi.org/10.1093/bib/bbr013
- S. Daminelli, V. J. Haupt, M. Reimann, and M. Schroeder, "Drug repositioning through incomplete bi-cliques in an integrated drug-target-disease network," Integrative Biology (Camb.), Vol. 7, pp. 778- 788, 2012.
- O. Trott, A. J. Olson, "AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization and multithreading," Journal of Computational Chemistry, Vol. 31, pp. 455-461, 2010.