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Loop-mediated isothermal amplification assay for the detection of Salmonella spp. in pig feces

  • Kim, Yong Kwan (Animal Disease Diagnostic Division, Animal and Plant Quarantine Agency) ;
  • Kim, Ha-Young (Animal Disease Diagnostic Division, Animal and Plant Quarantine Agency) ;
  • Jeon, Albert Byungyun (Animal Disease Diagnostic Division, Animal and Plant Quarantine Agency) ;
  • Lee, Myoung-Heon (Animal Disease Diagnostic Division, Animal and Plant Quarantine Agency) ;
  • Bae, You-Chan (Animal Disease Diagnostic Division, Animal and Plant Quarantine Agency) ;
  • Byun, Jae-Won (Animal Disease Diagnostic Division, Animal and Plant Quarantine Agency)
  • Received : 2013.08.07
  • Accepted : 2014.02.28
  • Published : 2014.06.30

Abstract

Salmonella are causative agents of gastroenteritis and systemic disease in animals. The invA gene was selected as a target sequence of loop-mediated isothermal amplification (LAMP) assay for diagnosis of Salmonella infection. The detection limits for broth dilution, spiked feces and enrichment were $10^4$, $10^5$ and $10^2$ CFUs/mL, respectively. The LAMP assay developed in the present study may be a reliable method for detection of Salmonella spp. in pig feces.

Keywords

References

  1. Arnold T, Scholz HC, Marg H, Rösler U, Hensel A. Impact of invA-PCR and culture detection methods on occurrence and survival of Salmonella in the flesh, internal organs and lymphoid tissues of experimentally infected pigs. J Vet Med B Infect Dis Vet Public Health 2004, 51, 459-463. https://doi.org/10.1111/j.1439-0450.2004.00808.x
  2. Hara-Kudo Y, Yoshino M, Kojima T, Ikedo M. Loopmediated isothermal amplification for the rapid detection of Salmonella. FEMS Microbiol Lett 2005, 253, 155-161. https://doi.org/10.1016/j.femsle.2005.09.032
  3. Hoelzer K, Moreno Switt AI, Wiedmann M. Animal contact as a source of human non-typhoidal salmonellosis. Vet Res 2011, 42, 34. https://doi.org/10.1186/1297-9716-42-34
  4. Horisaka T, Fujita K, Iwata T, Nakadai A, Okatani AT, Horikita T, Taniguchi T, Honda E, Yokomizo Y, Hayashidani H. Sensitive and specific detection of Yersinia pseudotuberculosis by loop-mediated isothermal amplification. J Clin Microbiol 2004, 42, 5349-5352. https://doi.org/10.1128/JCM.42.11.5349-5352.2004
  5. Kim S, Frye JG, Hu J, Fedorka-Cray PJ, Gautom R, Boyle DS. Multiplex PCR-based method for identification of common clinical serotypes of Salmonella enterica subsp. enterica. J Clin Microbiol 2006, 44, 3608-3615. https://doi.org/10.1128/JCM.00701-06
  6. Li J, Ochman H, Groisman EA, Boyd EF, Solomon F, Nelson K, Selander RK. Relationship between evolutionary rate and cellular location among the Inv/Spa invasion proteins of Salmonella enterica. Proc Natl Acad Sci U S A 1995, 92, 7252-7256. https://doi.org/10.1073/pnas.92.16.7252
  7. Li X, Zhang S, Zhang H, Zhang L, Tao H, Yu J, Zheng W, Liu C, Lu D, Xiang R, Liu Y. A loopmediated isothermal amplification method targets the phoP gene for the detection of Salmonella in food samples. Int J Food Microbiol 2009, 133, 252-258. https://doi.org/10.1016/j.ijfoodmicro.2009.05.027
  8. Lim BK, Thong KL. Application of PCR-based serogrouping of selected Salmonella serotypes in Malaysia. J Infect Dev Ctries 2009, 3, 420-428.
  9. Moganedi KLM, Goyvaerts EMA, Venter SN, Sibara MM. Optimisation of the PCR-invA primers for the detection of Salmonella in drinking and surface waters following a pre-cultivation step. Water SA, 2007, 33, 195-202.
  10. Mori Y, Nagamine K, Tomita N, Notomi T. Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation. Biochem Biophys Res Commun 2001, 289, 150-154. https://doi.org/10.1006/bbrc.2001.5921
  11. Nagamine K, Kuzuhara Y, Notomi T. Isolation of singlestranded DNA from loop-mediated isothermal amplification products. Biochem Biophys Res Commun 2002, 290, 1195-1198. https://doi.org/10.1006/bbrc.2001.6334
  12. Nagamine K, Watanabe K, Ohtsuka K, Hase T, Notomi T. Loop-mediated isothermal amplification reaction using a nondenatured template. Clin Chem 2001, 47, 1742-1743.
  13. Notomi T, Okayama H, Masubuchi H, Yonekawa T, Watanabe K, Amino N, Hase T. Loop-mediated isothermal amplification of DNA. Nucleic Acids Res 2000, 28, e63. https://doi.org/10.1093/nar/28.12.e63
  14. Ohtsuka K, Yanagawa K, Takatori K, Hara-Kudo Y. Detection of Salmonella enterica in naturally contaminated liquid eggs by loop-mediated isothermal amplification, and characterization of Salmonella isolates. Appl Environ Microbiol 2005, 71, 6730-6735. https://doi.org/10.1128/AEM.71.11.6730-6735.2005
  15. Okamura M, Ohba Y, Kikuchi S, Takehara K, Ikedo M, Kojima T, Nakamura M. Rapid, sensitive, and specific detection of the O4 group of Salmonella enterica by loopmediated isothermal amplification. Avian Dis 2009, 53, 216-221. https://doi.org/10.1637/8450-081808-Reg.1
  16. Pui CF, Wong WC, Chai LC, Lee HY, Noorlis A, Zainazor TCT, Tang JYH, Ghazali FM, Cheah YK, Nakaguchi Y, Nishibuchi M, Radu S. Multiplex PCR for the concurrent detection and differentiation of Salmonella spp., Salmonella Typhi and Salmonella Typhimurium. Trop Med Health 2011, 39, 9-15. https://doi.org/10.2149/tmh.2010-20
  17. Sepp R, Szabo I, Uda H, Sakamoto H. Rapid techniques for DNA extraction from routinely processed archival tissue for use in PCR. J Clin Pathol 1994, 47, 318-323. https://doi.org/10.1136/jcp.47.4.318
  18. Tang T, Cheng A, Wang M, Li X, He Q, Jia R, Zhu D, Chen X. Development and clinical verification of a loopmediated isothermal amplification method for detection of Salmonella species in suspect infected ducks. Poult Sci 2012, 91, 979-986. https://doi.org/10.3382/ps.2011-01992
  19. Techathuvanan C, Draughon FA, D'Souza DH. Loopmediated isothermal amplification (LAMP) for the rapid and sensitive detection of Salmonella Typhimurium from pork. J Food Sci 2010, 75, M165-172. https://doi.org/10.1111/j.1750-3841.2010.01554.x
  20. Wilson IG. Inhibition and facilitation of nucleic acid amplification. Appl Environ Microbiol 1997, 63, 3741-3751.