The Korean Journal of Malacology (한국패류학회지)

The Malacological Society of Korea (한국패류학회)
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Microsatellite multiplex PCR method for selective breeding studies in Pacific abalone (Haliotis discus hannai)

북방전복 (Haliotis discus hannai)의 선발육종 연구를 위한 microsatellite multiplex PCR법 개발

  • 박철지 (국립수산과학원 육종연구센터) ;
  • 남원식 (국립수산과학원 육종연구센터) ;
  • 이명석 (국립수산과학원 육종연구센터) ;
  • 강지윤 (국립수산과학원 육종연구센터) ;
  • 김경길 (국립수산과학원 육종연구센터)
  • Received : 2014.11.24
  • Accepted : 2014.12.26
  • Published : 2014.12.31
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Abstract

The multiplex PCR system including six microsatellites from Haliotis discus hannai, consisting of dinucleotide and trinucleotide repeat units, is developed. The six loci were coamplified in a single reaction employing dye-labeled primers. Alleles from these loci were sized using an internal standard by automated sample processing in an ABI3100 Genetic Analyser. Amplified alleles in profiles containing selected microsatellites were typed clearly, providing easily interpretable results. In this results suggest that the presented multiplex PCR system may be a useful tool in a selective breeding program of H. discus hannai in which genetic identification will allow different genotypes to be reared together from fertilization. This should have a great impact as it will make selective breeding more efficient. Moreover, it will be useful in a variety of applications, including strain and hybrid identification, parentage assignment, pedigree reconstruction, estimating genetic diversity and/or inbreeding.

북방전복 선발육종에 필요한 친자확인 및 가계분석을 효율적으로 실험하기 위하여 microsatellite multiplex PCR 기술을 개발하였다. 개발한 mutiplex PCR 기술은 6개 microsatellite locus Hdh145, Hdh512, Hdh1321, Awb017, Awb083 및 Awb098을 한번의 PCR 증폭으로 다중분석이 가능하다. 이 기술은 높은 친자확인 성공률과 가계분석에 있어서도 모두 멘델의 분리법칙을 따르고 있다. 더욱이 대량의 시료처리를 필요로 하는 경우에 있어서도 시간절약 및 비용 절감뿐만 아니라 샘플 처리과정의 간소화가 가능하여 handling errors를 줄일 수 있다. 따라서 본 연구에서 개발된 multiplex PCR은 친자확인, 가계분석, 집단유전학 및 계통분류학 분석에 유용하게 사용할 수 있을 것이라 생각된다.

Keywords

References

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