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Genetic Diversity and Population Structure of Korean Soybean Collection Using 75 Microsatellite Markers

  • Lee, Gi-An (National Agrobiodiversity Center, National Academy of Agricultural Science, RDA) ;
  • Choi, Yu-Mi (National Agrobiodiversity Center, National Academy of Agricultural Science, RDA) ;
  • Yi, Jung-Yoon (National Agrobiodiversity Center, National Academy of Agricultural Science, RDA) ;
  • Chung, Jong-Wook (National Agrobiodiversity Center, National Academy of Agricultural Science, RDA) ;
  • Lee, Myung-Chul (National Agrobiodiversity Center, National Academy of Agricultural Science, RDA) ;
  • Ma, Kyung-Ho (National Agrobiodiversity Center, National Academy of Agricultural Science, RDA) ;
  • Lee, Sok-Young (National Agrobiodiversity Center, National Academy of Agricultural Science, RDA) ;
  • Cho, Jin-Woong (College of Agricultural and Life Science, Chungnam National University) ;
  • Lee, Jung-Ro (National Agrobiodiversity Center, National Academy of Agricultural Science, RDA)
  • 투고 : 2014.09.22
  • 심사 : 2014.10.22
  • 발행 : 2014.12.31

초록

Soybean (Glycine max L.) is crucial legume crop as source of high quality vegetable protein and oil, and Korea is regarded as a part of center of soybean origin. To expand the information of conserved genetic diversity, we analyzed the genetic variability of soybean collection mainly introduced Korean accessions using 75 microsatellite markers. A total of 1,503 alleles with an average value of 20.0 alleles were detected among 644 accessions. Korean collection revealed average allele number of 13.4 while Chinese, Japanese and Southeast Asian accessions showed 9.0, 5.4 and 6.5 mean alleles, respectively. Especially, Korean accessions showed more number of private allele per locus as 3.4 contrary to other geographical groups. The mean expected heterozygosity and polymorphic information content was 0.654 and 0.616, respectively, and expected heterozygosity values were not significantly distinguished according to the geographical groups. The phylogenetic dendrogram and deduced population structure based on DNA profiles of 75 SSR loci showed Korean accessions formed distinct gene pool against Chinese accessions, and could be divided into five subpopulations. Korean soybean accessions have specific genetic diversity and might be serve the valuable alleles for bio-industry as a part of the center of soybean origin.

키워드

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피인용 문헌

  1. Genetic diversity and population structure of Korean wild soybean ( Glycine soja Sieb. and Zucc.) inferred from microsatellite markers vol.71, 2017, https://doi.org/10.1016/j.bse.2017.02.002
  2. Genome-wide association and epistatic interactions of flowering time in soybean cultivar vol.15, pp.1, 2014, https://doi.org/10.1371/journal.pone.0228114
  3. Genetic Diversity Patterns and Discrimination of 172 Korean Soybean (Glycine max (L.) Merrill) Varieties Based on SSR Analysis vol.10, pp.3, 2020, https://doi.org/10.3390/agriculture10030077