References
- Baig, H. S., Saifullah, S. M. & Dar, A. 2006. Occurrence and toxicity of Amphidinium carterae Hulburt in the North Arabian Sea. Harmful Algae 5:133-140. https://doi.org/10.1016/j.hal.2005.06.010
- Baillie, K. D. 1971. A taxonomic and ecological study of the intertidal, sand-dwelling dinoflagellates of the north Eastern Pacific Ocean. M.Sc. thesis, Department of Botany, University of British Columbia, Vancouver, BC, Canada, 110 pp.
- Biecheler, B. 1952. Recherches sur les Peridiniens. Bull. Biol. France Belg. 36:1-149.
- Calado, A. J., Craveiro, S. C. & Moestrup, O. 1998. Taxonomy and ultrastructure of a freshwater, heterotrophic Amphidinium (Dinophyceae) that feeds on unicellular protists. J. Phycol. 34:536-554. https://doi.org/10.1046/j.1529-8817.1998.340536.x
- Clarke, K. J. & Pennick, N. C. 1972. Flagellar scales in Oxyrrhis marina Dujardin. Br. Phycol. J. 7:357-360. https://doi.org/10.1080/00071617200650371
- Clarke, K. J. & Pennick, N. C. 1976. The occurrence of body scales in Oxyrrhis marina Dujardin. Br. Phycol. J. 11:345-348. https://doi.org/10.1080/00071617600650391
- Coles, R. G., Lee Long, W. J., Watson, R. A. & Derbyshire, K. J. 1993. Distribution of seagrasses, and their fish and penaeid prawn communities, in Cairns Harbour, a tropical estuary, Northern Queensland, Australia. Aust. J. Mar. Freshw. Res. 44:193-210.
- Daugbjerg, N., Hansen, G., Larsen, J. & Moestrup, O. 2000. Phylogeny of some of the major genera of dinoflagellates based on ultrastructure and partial LSU rDNA sequence data, including the erection of three new genera of unarmoured dinoflagellates. Phycologia 39:302-317. https://doi.org/10.2216/i0031-8884-39-4-302.1
- Dodge, J. D. 1982. Marine dinoflagellates of the British Isles. Her Majesty's Stationary Office, London, 303 pp.
- Dolapsakis, N. P. & Economou-Amilli, A. 2009. A new marine species of Amphidinium (Dinophyceae) from Thermaikos Gulf, Greece. Acta Protazool. 48:153-170.
- Giovannoni, S. J., DeLong, E. F., Olsen, G. J. & Pace, N. R. 1988. Phylogenetic group-specific oligodeoxynucleotide probes for identification of single microbial cells. J. Bacteriol. 170:720-726. https://doi.org/10.1128/jb.170.2.720-726.1988
- Hallegraeff, G. M. 1993. A review of harmful algal blooms and their apparent global increase. Phycologia 32:79-99. https://doi.org/10.2216/i0031-8884-32-2-79.1
- Hallegraeff, G. M., McCausland, M. A. & Brown, R. K. 1995. Early warning of toxic dinoflagellate blooms of Gymnodinium catenatum in southern Tasmanian waters. J. Plankton Res. 17:1163-1176. https://doi.org/10.1093/plankt/17.6.1163
- Hansen, G. 1995. Analysis of the thecal pattern in the dinoflagellate Heterocapsa rotundata (Lohmann) comb. nov. (=Katodinium rotundatum (Lohmann) Loeblich). Phycologia 34:166-170. https://doi.org/10.2216/i0031-8884-34-2-166.1
- Holdich, D. M. & Harrison, K. 1981. The sphaeromatid isopod genus Sphaeromopsis Holdich & Jones in African, Australian and South American waters. Crustaceana 41:286-300. https://doi.org/10.1163/156854081X00868
- Horiguchi, T. 1995. Heterocapsa circularisquama sp. nov. (Peridiniales, Dinoiphyceae): a new marine dinoflagellate causing mass mortality of bivalves in Japan. Phycol. Res. 43:129-136. https://doi.org/10.1111/j.1440-1835.1995.tb00016.x
- Horiguchi, T. 1997. Heterocapsa arctica sp. nov. (Peridiniales, Dinophyceae), a new marine dinoflagellate from the artic. Phycologia 36:488-491. https://doi.org/10.2216/i0031-8884-36-6-488.1
- Huelsenbeck, J. P. & Ronquist, F. 2001. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755. https://doi.org/10.1093/bioinformatics/17.8.754
- Hulburt, E. M. 1957. The taxonomy of unarmored Dinophyceae of shallow embayments on Cape Cod, Massachusetts. Biol. Bull. 112:196-219. https://doi.org/10.2307/1539198
- Ichikawa, H. & Beardsley, R. C. 2002. The current system in the Yellow and East China Sea. J. Oceanogr. 58:77-92. https://doi.org/10.1023/A:1015876701363
- Iwataki, M., Hansen, G., Sawaguchi, T., Hiroishi, S. & Fukuyo, Y. 2004. Investigations of body scales in twelve Heterocapsa species (Peridiniales, Dinophyceae), including a new species H. pseudotriquetra sp. nov. Phycologia 43:394-403. https://doi.org/10.2216/i0031-8884-43-4-394.1
- Jeong, H. J., Kang, H., Shim, J. S., Park, J. K., Kim, J. S., Song, J. Y. & Choi, H. J. 2001. Interactions among the toxic dinoflagellate Amphidinium carterae, the heterotrophic dinoflagellate Oxyrrhis marina, and the calanoid copepods Acartia spp. Mar. Ecol. Prog. Ser. 218:77-86. https://doi.org/10.3354/meps218077
- Jorgensen, M. F., Murray, S. & Daugbjerg, N. 2004. Amphidinium revisited. I. Redefinition of Amphidnium (Dinophyceae) based on cladistic and molecular phylogenetic analyses. J. Phycol. 40:351-365. https://doi.org/10.1111/j.1529-8817.2004.03131.x
- Kang, N. S., Jeong, H. J., Moestrup, O. & Park, T. G. 2011. Gyrodiniellum shiwhaense n. gen., n. sp., a new planktonic heterotrophic dinoflagellate from the coastal waters of western Korea: morphology and ribosomal DNA gene sequence. J. Eukaryot. Microbiol. 58:284-309. https://doi.org/10.1111/j.1550-7408.2011.00544.x
- Kang, N. S., Jeong, H. J., Moestrup, O., Shin, W., Nam, S. W., Park, J. Y., de Salas, M. F., Kim, K. W. & Noh, J. H. 2010. Description of a new planktonic mixotrophic dinoflagellate Paragymnodinium shiwhaense n. gen., n. sp. from the coastal waters off western Korea: morphology, pigments, and ribosomal DNA gene sequence. J. Eukaryot. Microbiol. 57:121-144. https://doi.org/10.1111/j.1550-7408.2009.00462.x
- Larkin, M. A., Blackshields, G., Brown, N. P., Chenna, R., McGettigan, P. A., McWilliam, H., Valentin, F., Wallace, I. M., Wilm, A., Lopez, R., Thompson, J. D., Gibson, T. J. & Higgins, D. G. 2007. Clustal W and clustal X version 2.0. Bioinformatics 23:2947-2948. https://doi.org/10.1093/bioinformatics/btm404
- Larsen, J. 1985. Algal studies of the Danish Wadden Sea. II. A taxonomic study of psammobious dinoflagellates. Opera Bot. 79:14-37.
- Larsen, J. 1988. An ultrastructural study of Amphidinium poecilochroum (Dinophyceae), a phagotrophic dinoflagellate feeding on small species of cryptophytes. Phycologia 27:366-377. https://doi.org/10.2216/i0031-8884-27-3-366.1
- Larsen, J. & Patterson, D. J. 1990. Some flagellates (Protista) from tropical marine sediments. J. Nat. Hist. 24:801-937. https://doi.org/10.1080/00222939000770571
- Litaker, R. W., Vandersea, M. W., Kibler, S. R., Reece, K. S., Stokes, N. A., Steidinger, K. A., Millie, D. F., Bendis, B. J., Pigg, R. J. & Tester, P. A. 2003. Identification of Pfiesteria piscicida (Dinophyceae) and Pfiesteria-like organisms using internal transcribed spacer-specific PCR assays. J. Phycol. 39:754-761. https://doi.org/10.1046/j.1529-8817.2003.02112.x
- Lopes, R. M. & Silveira, M. 1994. Symbiosis between a pelagic flatworm and a dinoflagellate from a tropical area: structural observations. Hydrobiologia 287:277-284. https://doi.org/10.1007/BF00006376
- Medlin, L., Elwood, H. J., Stickel, S. & Sogin, M. L. 1988. The characterization of enzymatically amplified eukaryokic 16S-like rRNA-coding regions. Gene 71:491-499. https://doi.org/10.1016/0378-1119(88)90066-2
- Monroe, E. A. & Van Dolah, F. M. 2008. The toxic dinoflagellate Karenia brevis encodes novel type I-like polyketide synthases containing discrete catalytic domains. Protist 159:471-482. https://doi.org/10.1016/j.protis.2008.02.004
- Morrill, L. C. & Loeblich, A. R. 3rd. 1981. A survey for body scales in dinoflagellates and a revision of Cachonina and Heterocapsa (Pyrrhophyta). J. Plankton Res. 3:53-65. https://doi.org/10.1093/plankt/3.1.53
- Murray, S. A., Garby, T., Hoppenrath, M. & Neilan, B. A. 2012. Genetic diversity, morphological uniformity and polyketide production in dinoflagellates (Amphidinium, Dinoflagellata). PLoS ONE 7:e38253. https://doi.org/10.1371/journal.pone.0038253
- Murray, S., Jorgensen, M. F., Daugbjerg, N. & Rhodes, L. 2004. Amphidinium revisited. II. Resolving species boundaries in the Amphidinium operculatum species complex (Dinophyceae), including the descriptions of Amphidinium trulla sp. nov. and Amphidinium gibbosum. comb. nov. J. Phycol. 40:366-382. https://doi.org/10.1046/j.1529-8817.2004.03132.x
- Murray, S. & Patterson, D. J. 2002. The benthic dinoflagellate genus Amphidinium in south-eastern Australian waters, including three new species. Eur. J. Phycol. 37:279-298. https://doi.org/10.1017/S0967026202003591
- Murray, S. A., Wiese, M., Stuken, A., Brett, S., Kellmann, R., Hallegraeff, G. & Neilan, B. A. 2011. sxtA-based quantitative molecular assay to identify saxitoxin-producing harmful algal blooms in marine waters. Appl. Environ. Microbiol. 77:7050-7057. https://doi.org/10.1128/AEM.05308-11
- Nayak, B. B., Karunasagar, I. & Karanasagar, I. 1997. Influence of bacteria on growth and hemolysin production by the marine dinoflagellate Amphidinium carterae. Mar. Biol. 130:35-39. https://doi.org/10.1007/s002270050222
- Pennick, N. C. & Clarke, K. J. 1977. The occurrence of scales in the peridinian dinoflagellate Heterocapsa triquetra (Ehrenb.) Stein. Br. Phycol. J. 12:63-66. https://doi.org/10.1080/00071617700650081
- Ridgway, K. R. & Godfrey, J. S. 1997. Seasonal cycle of the East Australian Current. J. Geophys. Res. 102:22921-22936. https://doi.org/10.1029/97JC00227
- Ronquist, F. & Huelsenbeck, J. P. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574. https://doi.org/10.1093/bioinformatics/btg180
- Scholin, C. A., Herzog, M., Sogin, M. & Anderson, D. M. 1994. Identification of group- and strain-specific genetic markers for globally distributed Alexandrium (Dinophyceae). II. Sequence analysis of a fragment of the LSU rRNA gene. J. Phycol. 30:999-1011. https://doi.org/10.1111/j.0022-3646.1994.00999.x
- Sekida, S., Okuda, K., Katsumata, K. & Horiguchi, T. 2003. A novel type of body scale found in two strains of Amphidinium species (Dinophyceae). Phycologia 42:661-666. https://doi.org/10.2216/i0031-8884-42-6-661.1
- Selina, M. S. & Levchenko, E. V. 2011. Species composition and morphology of dinoflagellates (Dinophyta) of epiphytic assemblages of Peter the Great Bay in the Sea of Japan. Russ. J. Mar. Biol. 37:23-32. https://doi.org/10.1134/S1063074011010135
- Smith, S. W., Overbeek, R., Woese, C. R., Gilbert, W. & Gillevet, P. M. 1994. The genetic data environment an expandable GIU for multiple sequence analysis. Comput. Appl. Biosci. 10:671-675.
- Stamatakis, A. 2006. RaxML-VI-HPC: maximum likelihoodbased phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688-2690. https://doi.org/10.1093/bioinformatics/btl446
- Tamura, K., Dudley, J., Nei, M. & Kumar, S. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599. https://doi.org/10.1093/molbev/msm092
- Tamura, M., Takano, T. & Horiguchi, T. 2009. Discovery of a novel type of body scale in the marine dinoflagellate, Amphidinium cupulatisquama sp. nov. (Dinophyceae). Phycol. Res. 57:304-312. https://doi.org/10.1111/j.1440-1835.2009.00550.x
- Taylor, D. L. 1971. On the symbiosis between Amphidinium klebsii (Dinophyceae) and Amphiscolops langerhansi (Turbellaria: Acoela). J. Mar. Biol. Assoc. U. K. 51:301- 313. https://doi.org/10.1017/S0025315400031799
- Watanabe, M. M., Suda, S. Inouye, I., Sawaguchi, T. & Chihara, M. 1990. Lepidodinium viride gen. et sp. nov. (Gymnodiniales, Dinophyta), a green dinoflagellate with a chlorophyll A- and B-containing endosymbiont. J. Phycol. 26:741-751. https://doi.org/10.1111/j.0022-3646.1990.00741.x
- Weekers, P. H. H., Gast, R. J., Fuerst, P. A. & Byers, T. J. 1994. Sequence variations in small-subunit ribosomal RNAs of Hartmannella vermiformis and their phylogenetic implications. Mol. Biol. Evol. 11:684-690.
- Yasumoto, T. 1990. Marine microorganism toxins: an overview. In Graneli, E., Sundstrom, B., Edler, L. & Anderson, D. M. (Eds.) Toxic Marine Phytoplankton. Elsevier Science Publications, New York, pp. 3-8.
- Zapata, M., Rodriquez, F. & Garrido, J. L. 2000. Separation of chlorophylls and carotenoids from marine phytoplankton: a new HPLC method using a reversed phase C8 column and pyridine-containing mobile phases. Mar. Ecol. Prog. Ser. 195:29-45. https://doi.org/10.3354/meps195029
- Zhang, H., Bhattacharya, D. & Lin, S. 2007. A three-gene dinoflagellate phylogeny suggests monophyly of Prorocentrales and a basal position for Amphidinum and Heterocapsa. J. Mol. Evol. 65:463-474. https://doi.org/10.1007/s00239-007-9038-4
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