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Improved Purification of Thermophilic FoF1-ATP Synthase c-Subunit Rings and Solid-State NMR Characterization of Them in Different Lipid Membranes

  • Bak, Suyeon (Department of Biophysics and Chemical Biology, Seoul National University) ;
  • Kang, Su-Jin (Department of Biophysics and Chemical Biology, Seoul National University) ;
  • Suzuki, Toshiharu (Chemical Resources Laboratory, Tokyo Institute of Technology) ;
  • Yoshida, Masasuke (Chemical Resources Laboratory, Tokyo Institute of Technology) ;
  • Fujiwara, Toshimichi (Institute for Protein Research, Osaka University) ;
  • Akutsu, Hideo (Department of Biophysics and Chemical Biology, Seoul National University)
  • Received : 2013.07.17
  • Accepted : 2013.08.14
  • Published : 2013.12.20

Abstract

ATP synthase produces ATP, a major energy source for metabolic processes in organisms, from ADP and inorganic phosphate in cellular membranes. ATP synthase is known as a rotary motor, in which the c-subunit ring functions as a rotor. In this work, we have tried to develop a more general preparation procedure of thermophilic $F_oc$-ring ($TF_oc$-ring) for NMR measurements. The expression of $TF_oF_1$ is easily affected by various experimental conditions such as temperature, shape and size of a flask, a volume of medium, and shaking rate of an incubator. Accordingly, we have tried to optimize the expression conditions of $TF_oF_1$. $TF_oc$-rings were purified from $TF_oF_1$ according to a reported method. We modified purification procedures to improve purity and yield of $TF_oc$. On top of them, we found a new combination of detergents for the purification at anion-exchange column chromatography. To examine the effect of lipid environments on the structure, the $TF_oc$-rings were reconstituted into two kinds of lipid bilayers, namely, saturated and unsaturated lipid ones. Then, we have compared characteristics of the $TF_oc$-ring structures in these membranes with solid-state NMR.

Keywords

References

  1. M. Yoshida, E. Muneyuki, and T. Hisabori, Nat Rev Mol Cell Biol, 2, 669-677, (2001) https://doi.org/10.1038/35089509
  2. P.D. Boyer, Annu Rev Biochem, 66, 717-749, (1997) https://doi.org/10.1146/annurev.biochem.66.1.717
  3. I.N. Watt, et al., Proc Natl Acad Sci U S A, 107, 16823-16827, (2010) https://doi.org/10.1073/pnas.1011099107
  4. S.P. Tsunoda, et al., Proc Natl Acad Sci U S A, 98, 898-902, (2001) https://doi.org/10.1073/pnas.98.3.898
  5. H. Seelert, et al., Nature, 405, 418-419, (2000) https://doi.org/10.1038/35013148
  6. L. Preiss, et al., PLoS Biol, 8, e1000443, (2010) https://doi.org/10.1371/journal.pbio.1000443
  7. N. Mitome, et al., Proc Natl Acad Sci U S A, 101, 12159-12164, (2004) https://doi.org/10.1073/pnas.0403545101
  8. T. Meier, et al., Science, 308, 659-662, (2005) https://doi.org/10.1126/science.1111199
  9. D. Matthies, et al., J Mol Biol, 388, 611-618, (2009) https://doi.org/10.1016/j.jmb.2009.03.052
  10. H. Yagi et al., J Biol Chem, 284, 2374-2382, (2009) https://doi.org/10.1074/jbc.M808212200
  11. T. Nakano, et al., J Mol Biol, 358, 132-144, (2006) https://doi.org/10.1016/j.jmb.2006.01.011
  12. A.M. Seddon, P. Curnow, P.J. Booth, Biochim Biophys Acta, 1666, 105-117, (2004) https://doi.org/10.1016/j.bbamem.2004.04.011
  13. I. Yumen, et al., Protein Expr Purif, 82, 396-401, (2012) https://doi.org/10.1016/j.pep.2012.02.005
  14. T. Suzuki, et al., J Biol Chem, 277, 13281-13285, (2002) https://doi.org/10.1074/jbc.M111210200
  15. K. Takegoshi, et al., Chem Phys Lett, 344, 631-637, (2001) https://doi.org/10.1016/S0009-2614(01)00791-6
  16. T. D. Goddard, D.G.Kneller, SPARKY 3, University of California, San Francisco, (2008)
  17. M. Kobayashi, et al., Biophys J., 94, 4339-4347, (2008) https://doi.org/10.1529/biophysj.107.123745
  18. S. Leekumjorn, A.K. Sum, J Phys Chem B., 111, 6026-6033, (2007) https://doi.org/10.1021/jp0686339

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