References
- Budhiraja R, Hermkes R, Müller S, Schmidt J, Colby T, Panigrahi K, Coupland G, Bachmair A (2009) Substrates related to chromatin and to RNA-dependent processes are modified by Arabidopsis SUMO isoforms that differ in a conserved residue with influence on desumoylation. Plant Physiol 149:1529-1540 https://doi.org/10.1104/pp.108.135053
- Catala R, Ouyang J, Abreu IA, Hu Y, Seo H, Zhang X, Chua N-H (2007) The Arabidopsis E3 SUMO ligase SIZ1 regulates plant growth and drought responses. Plant Cell 19:2952-2966 https://doi.org/10.1105/tpc.106.049981
- Chaikam V, Karlson DT (2010) Response and transcriptional regulation of rice SUMOylation system during development and stress conditions. BMB rep 43:103-109 https://doi.org/10.5483/BMBRep.2010.43.2.103
- Chen H, Zou Y, Shang Y, Lin H, Wang Y, Cai R, Tang X, Zhou J-M (2008) Firefly luciferase complementation imaging assay for protein-protein interactions in plants. Plant Physiol 146: 368-376
- Colby T, Matthai A, Boeckelmann A, Stuible HP (2006) SUMO-conjugating and SUMO-deconjugating enzymes fromArabidopsis. Plant Physiol 142:318-332 https://doi.org/10.1104/pp.106.085415
- Dohmen RJ (2004) SUMO protein modification. Biochim Biophys Acta 1695:113-131 https://doi.org/10.1016/j.bbamcr.2004.09.021
- Downes B, Vierstra RD (2005) Post-translational regulation in plants employing a diverse set of polypeptide tags. Biochem Soc Trans 33:393-399 https://doi.org/10.1042/BST0330393
- Elrouby N, Coupland G (2010) Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Proc Natl Acad Sci USA 107:17415-17420 https://doi.org/10.1073/pnas.1005452107
- Garcia-Dominguez M, March-Diaz R, Reyes JC (2008) The PHD domain of plant PIAS proteins mediates sumoylation of bromodomain GTE proteins. J Biol Chem 283:21469-21477 https://doi.org/10.1074/jbc.M708176200
- Hay RT (2005) Sumo: a history of modification. Mol Cell 18:1-12 https://doi.org/10.1016/j.molcel.2005.03.012
- Huang L, Yang S, Zhang S, Liu M, Lai J, Qi Y, Shi S, Wang J, Wang Y, Xie Q, Yang C (2009) The Arabidopsis SUMO E3 ligase AtMMS21, a homologue of NSE2/MMS21, regulates cell proliferation in the root. Plant J 60:666-678 https://doi.org/10.1111/j.1365-313X.2009.03992.x
- Ishida T, Fujiwara S, Miura K, Stacey N, Yoshimura M, Schneider K, Adachi S, Minamisawa K, Umeda M, Sugimoto K (2009) SUMO E3 ligase HIGH PLOIDY2 regulates endocycle onset and meristem maintenance in Arabidopsis. Plant Cell 21: 2284-2297 https://doi.org/10.1105/tpc.109.068072
- Jeong DH, An S, Park S, Kang HG, Park GG, Kim SR, Sim J, Kim YO, Kim MK, Kim SR, Kim J, Shin M, Jung M, An G (2005) Generation of a flanking sequence-tag database for activation-tagging lines in japonica rice. Plant J 45:123-132
- Jin JB, Jin YH, Lee J, Miura K, Yoo CY, Kim W-Y, Van Oosten M, Hyun Y, Somers DE, Lee I, Yun D-J, Bressan RA, Hasegawa PM (2008) The SUMO E3 ligase, AtSIZ1, regulates flowering by controlling a salicylic acid-mediated floral promotion pathway and through affects on FLC chromatin structure. Plant J 53:530-540
- Jonson ES (2004) Protein modification by SUMO. Annu Rev Biochem 73:355-382 https://doi.org/10.1146/annurev.biochem.73.011303.074118
- Kurepa J, Walker JM, Smalle J, Gosink MM, Davis SJ, Durham TL, Sung D-Y, Vierstra RD (2003) The small ubiquitin-like modifier (SUMO) protein modification system in Arabidopsis: Accumulation of SUMO1 and -2 conjugates is increased by stress. J Biol Chem 278:6862-6872 https://doi.org/10.1074/jbc.M209694200
- Lee J, Nam J, Park HC, Na G, Miura K, Jin JB, Yoo CY, Baek D, Kim DH, Jeong JC, Kim D, Lee SY, Salt DE, Mengiste T, Gong Q, Ma S, Bohnert HJ, Kwak SS, Bressan RA, Hasegawa PM, Yun DJ (2007) Salicylic acid-mediated innate immunity in Arabidopsis is regulated by SIZ1 SUMO E3 ligase. Plant J 49:79-90
- Matunis MJ, Coutavas E, Blobel G (1996) A novel ubiquitin-like modification modulates the partitioning of the Ran-GTPaseactivating protein RanGAP1 between the cytosol and the nuclear pore complex. J Cell Biol 135:1457-1470 https://doi.org/10.1083/jcb.135.6.1457
- Miller MJ, Barrett-Wilt GA, Hua Z, Vierstra RD (2010) Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis. Proc Natl Acad Sci USA 107:16512-16517 https://doi.org/10.1073/pnas.1004181107
- Miura K, Hasegawa PM (2010) Sumoylation and other ubiquitinlike post-translational modifications in plants. Trends Cell Biol 20:223-232 https://doi.org/10.1016/j.tcb.2010.01.007
- Miura K, Jin JB, Hasegawa PM (2007a) Sumoylation, a post-translational regulatory process in plants. Curr Opin Plant Biol 10:495-502 https://doi.org/10.1016/j.pbi.2007.07.002
- Miura K, Jin JB, Lee J, Yoo CY, Stirm V, Miura T, Ashworth EN, Bressan RA, Yun DJ, Hasegawa PM (2007b) SIZ1-mediated sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance in Arabidopsis. Plant Cell 19:1403-1414 https://doi.org/10.1105/tpc.106.048397
- Miura K, Lee J, Jin JB, Yoo CY, Miura T, Hasegawa PM (2009) Sumoylation of ABI5 by the Arabidopsis SUMO E3 ligase SIZ1 negatively regulates abscisic acid signaling. Proc Natl Acad Sci USA 106:5418-5423 https://doi.org/10.1073/pnas.0811088106
- Miura K, Rus A, Sharkhuu A, Yokoi S, karthikeyan AS, Raghothama KG, Baek D, Koo YD, Jin JB, Bressan RA, Yun DJ, Hasegawa PM (2005) The Arabidopsis SUMO E3 ligase SIZ1 controls phosphate deficiency responses. Proc Natl Acad Sci USA 102:7760-7765 https://doi.org/10.1073/pnas.0500778102
- Moon J, Parry G, Estelle M (2004) The ubiquitin-proteasome pathway and plant development. Plant Cell 16:3181-3195 https://doi.org/10.1105/tpc.104.161220
- Murray MG, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucl Acids Res 8:4321-4325 https://doi.org/10.1093/nar/8.19.4321
- Okada S, Nagabuchi M, Takamura Y, Nakagawa T, Shinmyozu K, Nakayama J-I, Tanaka K (2009) Reconstitution of Arabidopsis thaliana SUMO pathways in E. coli: functional evaluation of SUMO machinery proteins and mapping of SUMOylation sites by mass spectrometry. Plant Cell Physiol 50:1049-1061 https://doi.org/10.1093/pcp/pcp056
- Park HC, Choi W, Park HJ, Cheong MS, Koo YD, Shin G, Chung WS, Kim W-Y, Kim MG, Bressan RA, Bohnert HJ, Lee SY, Yun D-J (2011a) Identification and molecular properties of SUMO-binding proteins in Arabidopsis. Mol Cells 32:143-151 https://doi.org/10.1007/s10059-011-2297-3
- Park HC, Park J, Baek D, Yun D-J (2011b) Functional characterization of Arabidopsis thaliana BLH8, BEL1-like homeodomain 8 involved in environmental stresses. Korean J Plant Biotechnol 38:162-168 https://doi.org/10.5010/JPB.2011.38.2.162
- Park HC, Kim H, Koo SC, Park HJ, Cheong MS, Hong H, Baek D, Chung WS, Kim DH, Bressan RA, Lee SY, Bohnert HJ, Yun D-J (2010) Functional characterization of the SIZ/PIAS-type SUMO E3 ligases, OsSIZ1 and OsSIZ2 in rice. Plant Cell Environ 33:1923-1934 https://doi.org/10.1111/j.1365-3040.2010.02195.x
- Saracco SA, Miller MJ, Kurepa J, Vierstra RD (2007) Genetic analysis of sumoylation in Arabidopsis: heat-induced conjugation of SUMO1 and SUMO2 is essential. Plant Physiol 145:119-134 https://doi.org/10.1104/pp.107.102285
- Schmidt D, Muller S (2003) PIAS/SUMO: new partners in transcriptional regulation. Cell Mol Life Sci 60:2561-2574 https://doi.org/10.1007/s00018-003-3129-1
- Seeler JS, Dejean A (2003) Nuclear and unclear functions of SUMO. Nat Rev Mol Cell Biol 4:690-699 https://doi.org/10.1038/nrm1200
- Smalle J, Vierstra RD (2004) The ubiquitin 26s proteasome proteolytic pathway. Annu Rev Plant Physiol Plant Mol Biol 55:555-590 https://doi.org/10.1146/annurev.arplant.55.031903.141801
- Thangasamy S, Guo C-L, Chuang M-H, Lai M-H, Chen J, Jauh G-Y (2011) Rice SIZ1, a SUMO E3 ligase, controls spikelet fertility through regulation of anther dehiscence. New Phytol 189:869-882 https://doi.org/10.1111/j.1469-8137.2010.03538.x
- van den Burg HA, Kini RK, Schuurink RC, Takken FLW (2010) Arabidopsis small ubiquitin-like modifier paralogs have distinct functions in development and defense. Plant Cell 22:1998-2016 https://doi.org/10.1105/tpc.109.070961
- Wang H, Makeen K, Yan Y, Cao Y, Sun S, Xu G (2011) OsSIZ1 regulates the vegetative growth and reproductive development in rice. Plant Mol Biol Rep 29:411-417 https://doi.org/10.1007/s11105-010-0232-y
- Welchman RL, Gordon D, Mayer RJ (2005) Ubiquitin and ubiquitination-like proteins as multifunctional signals. Nat Rev Mol Cell Biol 6:599-609 https://doi.org/10.1038/nrm1700
- Yoo CY, Miura K, Jin JB, Lee J, Park HC, Salt DE, Yun D-J, Bressan RA, Hasegawa PM (2006) SIZ1 small ubiquitin-like modifier E3 ligase facilitates basal thermotolerance in Arabidopsis independent of salicylic acid. Plant Physiol 142:1548-1558 https://doi.org/10.1104/pp.106.088831