Karyotype Analysis and rDNA Physical Mapping in Rye (Secale cereale L.)

호밀(Secale cereale L.)의 핵형분석과 rDNA의 Physical Mapping

  • Lee, Joon Soo (Research Institute of Technology R&D Headquarter, KGC) ;
  • Seo, Bong Bo (Department of Biology, College of Natural Science, Kyungpook National University) ;
  • Kim, Min (Department of Horticultural Science, College of Life & Environmental Sciences, Daegu University)
  • 이준수 (KGC R&D 본부 기술연구소) ;
  • 서봉보 (경북대학교 자연과학대학 생물학과) ;
  • 김민 (대구대학교 생명환경대학 원예학과)
  • Received : 2010.06.01
  • Published : 2010.06.30

Abstract

This study was carried out to determine the chromosomal localization of the 5S and 18S-26S ribosomal DNA(rDNA) genes by means of fluorescence in situ hybridization(FISH) techniques, and the constitutive heterochromatin detected by means of Gimsa C-banding technique in rye(Secale cereale L.). The somatic chromosomes number was 2n=14. The karyotype consists of four pairs of metacentrics(chromosomes 1, 2, 3, and 7) and three pairs of submetacentrics(chromosomes 4, 5, and 6). Secondary constrictions appeared in the short arm of chromosome 1. The 5S rDNA genes have been located on two pairs of chromosomes 1 and 5, and 18S-26S rDNAs genes have been located on one pair of chromosome 1. 5S rDNA genes were detected on the distal region of the secondary constrictions in nucleolus organizer regions(NOR) in chromosome 1, and other detected on the intercalary region in the short arm of chromosome 5.

본 실험은 곡류 작물중에서 육종의 소재로써 많은 장점을 지닌 호밀을 Gimsa C-분염법과 FISH기법을 이용하여 구성이질 염색질과 5S와 18S-26S rRNA 유전자의 염색체상의 위치를 확인하고자 본 실험을 수행하였다. 그 결과를 요약하면 아래와 같다. 표지되었으며 2차협착으로 부수체가 존재하는 1번 염색체의 부수체의 말단과 5번 염색체의 중간에 표지되었고, 18S-26S rDNAs 유전자는 1개의 염색체에 표지되었으며 이 염색체는 2차협착으로 부수체가 존재하는 1번 염색체의 인 형성체 부위에 표지되었다. 1번 염색체에는 5S 와 18S-26S rDNAs 유전자가 표지되었고 5번 염섹체에는 5S rDNA 유전자만이 표지되었다.

Keywords

Acknowledgement

Supported by : 경북대학교

References

  1. Appels R, Gerlach WL, Dennis ES, Swift H and Peacock WJ. 1980. Molecular and chromosomal organization of DNA sequences coding for the ribosomal RNAs in cereals. Chromosoma. 78:293-311. https://doi.org/10.1007/BF00327389
  2. Badaeva ED, Friebe B, and Gill BS. 1996. Genome differentiation in Aegilops. 2. Physical mapping 5S and 18S-26S ribosomal RNA gene families in diploid species. Genome 39:1150-1158. https://doi.org/10.1139/g96-145
  3. Brown GR, Amarasinghe V, Kiss G and Carlson JE. 1993. Preliminary karyotype and chromosomal localization of ribosomal DNA sites in white spruce using fluorescence in situ hybridization. Genome 36:310-316. https://doi.org/10.1139/g93-043
  4. Bushuk W. 1976. Rye ; production, chemistry and technology. American Association of Cereal Chemists, INS. pp1-22.
  5. Gall BS and Kimber G. 1974. The giemsa C-banded karyotype of rye. Proc. Nat. Acad. Sci. USA. 71(4):1247-1249. https://doi.org/10.1073/pnas.71.4.1247
  6. Hizume MF and Kondo K. 1992. Differential staining and in situ hybridization of nucleolar organizers and centromeres in Cycas revoluta chromosome. Jpn. J. Genet. 67:381-387. https://doi.org/10.1266/jjg.67.381
  7. Kim NS, Kuspira J, Armstrong K and Bhambhani R. 1995. Genetic and cytogenetic analyses of the A geneme of Triticum monococcum. VIII. Localization of rRNAs and characterization of 5S rRNA genes. Genome 36:77-86.
  8. Kim SY, Choi HW, Koo DH, Kim CS, and Bang JW. 2005. Karyotype analysis and physical mapping of rDNAs using McFISH in Jeffersonia dubia Benth. Korean. J. Medicinal Crop Sci. 13(1):48-51
  9. Lee WJ, Bang JW and Choi SH. 1979. Giemsa C-banding pattern of rye, Secale cereale. Kor. J. Bota. 22(4):101-106.
  10. Leitch IJ and Heslop JS. 1992. Physical mapping of the 18S-5.8S-26S rRNA genes in barley by in situ hybridization. Genome. 35:1013-1018. https://doi.org/10.1139/g92-155
  11. Mukai YB, Endo TR and Gill BS. 1990. Physical mapping of the 5S rRNA multigene family in common wheat. Heredity 81:290-295.
  12. Rayburn AL and Gill BS. 1985. Use of biotin-labeled probes to map specific DNA sequences on wheat chromosome. Heredity 76:78-81.
  13. Reddy P and Appels R. 1989. A second locus for the 5S multigene family in Secale L. : sequence divergence in two lineages of the family. Genome 32:456-467. https://doi.org/10.1139/g89-469
  14. Schlegel R, Melz G and Mettin D. 1986. Rye cytology, cytogenetics, and genetics-current status. Theor. Appl. Genet. 72:721-734.
  15. Seo BB and Lee SH. 1997. Chromosomal localization of 5S and 18S-26S rRNA genes using fluoresence in situ hybridization in Allium wakegi. Kor. J. Genet. 19(1):19-26.
  16. Seo BB, Lee SH and Mukai Y. 1996. Physical mapping of 5S and 18S-26S ribosomal RNA gene families in Allium victorialis var. platyphyllum. J. Plant Biologi. 40(2):132-137.