Gene Cloning, Expression, and Characterization of a Novel ${\beta}$-Mannanase from Bacillus circulans CGMCC 1416

  • Li, Yanan (Feed Research Institute, Chinese Academy of Agricultural Sciences) ;
  • Yang, Peilong (Feed Research Institute, Chinese Academy of Agricultural Sciences) ;
  • Meng, Kun (Feed Research Institute, Chinese Academy of Agricultural Sciences) ;
  • Wang, Yaru (Feed Research Institute, Chinese Academy of Agricultural Sciences) ;
  • Luo, Huiying (Feed Research Institute, Chinese Academy of Agricultural Sciences) ;
  • Wu, Ningfeng (Biotechnology Research Institute, Chinese Academy of Agricultural Sciences) ;
  • Fan, Yuliu (Biotechnology Research Institute, Chinese Academy of Agricultural Sciences) ;
  • Yao, Bin (Feed Research Institute, Chinese Academy of Agricultural Sciences)
  • Published : 2008.01.31

Abstract

A DNA fragment containing 2,079 base pairs from Bacillus circulans CGMCC 1416 was cloned using degenerate PCR and inverse PCR. An open reading frame containing 981 bp was identified that encoding 326 amino acids residues, including a putative signal peptide of 31 residues. The deduced amino acid sequence showed the highest identity (68.1%) with $endo-{\beta}-1,4-D-mannanase$ from Bacillus circulans strain K-1 of the glycoside hydrolase family 5 (GH5). The sequence encoding the mature protein was cloned into the pET-22b(+) vector and expressed in Escherichia coli as a recombinant fusion protein containing an N-terminal hexahistidine sequence. The fusion protein was purified by $Ni^{2+}$ affinity chromatography and its hexahistidine tag cleaved to yield a 31-kDa ${\beta}$-mannanase having a specific activity of 481.55U/mg. The optimal activity of the purified protein, MANB48, was at $58^{\circ}C$ and pH 7.6. The hydrolysis product on substrate locust bean gum included a monosaccharide and mainly oligosaccharides. The recombinant MANB48 may be of potential use in the feed industry.

Keywords

References

  1. Araujo, A. and O. P. Ward. 1990. Hemicellulases of Bacillus species: Preliminary comparative studies on production and properties of mannanases and galactanases. J. Appl. Bacteriol. 68: 253-261 https://doi.org/10.1111/j.1365-2672.1990.tb02572.x
  2. Arcand, D. N., D. F. Kluepfel, M. R. Paradis, and F. Shareck. 1993. $\beta$-Mannanase of Streptomyces lividans 66: Cloning and DNA sequence of the manA gene and characterization of the enzyme. Biochem. J. 290: 857-863 https://doi.org/10.1042/bj2900857
  3. Baird, D. S., M. A. Hefford, D. A. Johnson, L. W. Sung, M. Yaguchi, and V. L. Seligy. 1990. The Glu residue in the conserved Asn-Glu-Pro sequence of two highly divergent endo- $\beta$-1,4-glucanases is essential for enzymatic activity. Biochem. Biophys. Res. Commun. 169: 1035-1039 https://doi.org/10.1016/0006-291X(90)91998-8
  4. Belaich, A., H. P. Fierobe, D. Baty, B. Busetta, C. Bagnara- Tardif, C. Gaudin, and J. P. Belaich. 1992. The catalytic domain of endoglucanase A from Clostridium cellulolyticum: Effects of arginine 79 and histidine 122 mutations on catalysis. J. Bacteriol. 174: 4677-4682 https://doi.org/10.1128/jb.174.14.4677-4682.1992
  5. Bewley, D. J., A. R. Burton, Y. Morohashi, and B. G. Fincher. 1997. Molecular cloning of a cDNA encoding a (1-4)-$\beta$-mannan endohydrolase from the seeds of germinated tomato (Lycopersicon esculentum). Planta 203: 454-459 https://doi.org/10.1007/s004250050214
  6. Buchert, J., J. Salminen, M. Sika-aho, M. Ranua, and L. Viikari. 1993. The role of Trichoderma reesei xylanase and mannanase in the treatment of softwood kraft pulp prior to bleaching. Holzforschung 47: 473-478 https://doi.org/10.1515/hfsg.1993.47.6.473
  7. Dutta, S., J. K. Bradford, and J. D. Nevins. 1997. Endo-betamannanase activity present in cell wall extracts of lettuce endosperm prior to radicle emergence. Plant Physiol. 113: 155-161 https://doi.org/10.1104/pp.113.1.155
  8. Fraissi, M., N. Y. S. Woo, and J. Noailla-Depeyre. 1981. Distribution pattern of digestive enzyme activities in the intestine of the catfish (Ameiums nebulosus L.) and of the carp (Cyprinus carpio L). Comp. Biochem. Physiol. 70A: 443-446
  9. Guiseppi, A., B. Cami, J. L. Aymeric, G. Ball, and N. Creuzet. 1998. Homology between endoglucanase Z of Erwinia chrysanthemi and endoglucanases of Bacillus subtilis and alkalophilic Bacillus. Mol. Microbiol. 2: 159-164
  10. Halstead, J. R., M. P. Fransen, Y. R. Eberhart, J. A. Park, J. H. Gilbert, and P. G. Hazlewood. 2000. ${\alpha}$-Galactosidase A from Pseudomonas fluorescens subsp. cellulosa: Cloning, high level expression and its role in galactomannan hydrolysis. FEMS Microbiol. Lett. 192: 197-203
  11. Henrissat, B. 1991. A classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem. J. 280: 309-316 https://doi.org/10.1042/bj2800309
  12. Hilge, M., M. S. Gloor, W. Rypniewski, O. Sauer, D. T. Heightman, W. Zimmermann, K. Winterhalter, and K. Piontek. 1998. High-resolution native and complex structures of thermostable $\beta$-mannanase from Thermomonospora fusca substrate specificity in glycosyl hydrolase family 5. Structure 6: 1433-1444 https://doi.org/10.1016/S0969-2126(98)00142-7
  13. Kesty, C. N. and J. M. Kuehn. 2004. Incorporation of heterologous outer membrane and periplasmic proteins into Escherichia coli outer membrane vesicles. J. Biol. Chem. 279: 2069-2076 https://doi.org/10.1074/jbc.M307628200
  14. Kuhad, R. C., A. Singh, and K. E. Eriksson. 1997. Microorganisms and enzymes involved in the degradation of plant fiber cell walls. Adv. Biochem. Eng. Biotechnol. 57: 45-125
  15. Lee, J. T., C. A. Bailey, and A. L. Cartwright. 2003. Betamannanase ameliorates viscosity-associated depression of growth in broiler chickens fed guar germ and hull fractions. Poult. Sci. 82: 1925-1931 https://doi.org/10.1093/ps/82.12.1925
  16. Leggio, L., L. Parry, N. J. Beeumen, J. Van, M. Claeyssens, M. K. Bhat, and R. W. Pickersgill. 1997. Crystallization and preliminary X-ray analysis of the major endoglucanase from Thermoascus aurantiacus. Acta Crystallogr. 53: 599-604
  17. Ma, Y., Y. Xue, Y. Dou, Z. Xu, W. Tao, and P. Zhou. Characterization and gene cloning of a novel beta-mannanase from alkaliphilic Bacillus sp., N16-5. Extremophiles 8: 447-454 https://doi.org/10.1007/s00792-004-0405-4
  18. Macarron, R., J. V. Beeumen, B. Henrissat, I. Mata, and M. Claeyssens. 1993. Identification of an essential glutamate residue in the active site of endoglucanase III from Trichoderma reesei. FEBS Lett. 316: 137-140 https://doi.org/10.1016/0014-5793(93)81202-B
  19. McCutchen, M. C., D. G. Duffaud, P. Leduc, H. A. R. Peterson, A. Tayal, A. S. Khan, and M. R. Kelly. 1996. Characterization of extremely thermostable enzymatic breakers (${\alpha}$-1,6- galactosidase and ${\beta}$-1,4 mannanase) from the hyperthermophilic bacterium Thermotoga neapolitana 5068 for hydrolysis of guar gum. Biotechnol. Bioeng. 52: 332-339 https://doi.org/10.1002/(SICI)1097-0290(19961020)52:2<332::AID-BIT13>3.0.CO;2-L
  20. Omogbenigun, F. O., C. M. Nyachoti, and B. A. Slominski. 2004. Dietary supplementation with multienzyme preparations improves nutrient utilization and growth performance in weaned pigs. J. Anim. Sci. 82: 1053-1061 https://doi.org/10.2527/2004.8241053x
  21. Puchar, V., M. Vrsanska, P. Svoboda, J. Pohl, B. Z. Ogel, and P. Biely. 2004. Purification and characterization of two forms of endo-beta-1,4-mannanase from a thermotolerant fungus, Aspergillus fumigatus IMI 385708 (formerly Thermomyces lanuginosus IMI 158749). Biochim. Biophys. Acta 1674: 239-250 https://doi.org/10.1016/j.bbagen.2004.06.022
  22. Puls, J. 1997. Chemistry and biochemistry of hemicelluloses - relationship between hemicellulose structure and enzymes required for hydrolysis. Macromol. Symp. 120: 183-196
  23. Silver, J. and V. Keerikatte. 1989. Novel use of polymerase chain-reaction to amplify cellular DNA adjacent to an integrated provirus. J. Virol. 63: 1924-1928
  24. Stalbrand, H., A. Saloheimo, J. Vehmaanpera, B. Henrissat, and M. Penttila. 1995. Cloning and expression in Saccharomyces cerevisiae of a Trichoderma reesei ${\beta}$-mannanase gene containing a cellulose binding domain. Appl. Environ. Microbiol. 61: 1090-1097
  25. Sumner, J. B. and G. F. Somers. 1949. Dinitrosalicylic acid method for glucose. In: Laboratory Expression in Biological Chemistry. Academic Press, New York
  26. Suurnakki, A., M. Tenkanen, J. Buchert, and L. Viikari. 1997. Hemicellulases in the bleaching of chemical pulps. Adv. Biochem. Eng. Biotechnol. 57: 261-287
  27. Tanaka, M., M. Taniguchi, R. Matsuno, and T. Kamikubo. 1988. Cellulases from Eupenicillium javanicum. Methods Enzymol. 160: 251-259 https://doi.org/10.1016/0076-6879(88)60127-3
  28. Vasina, J. A. and X. F. Baney. 1997. Expression of aggregationprone recombinant proteins at low temperatures: A comparative study of the Escherichia coli cspA and tac promoter systems. Protein Expr. Purif. 9: 211-218 https://doi.org/10.1006/prep.1996.0678
  29. Wang, Q., D. Tull, A. Meinke, R. N. Gilkes, J. A. R. Warren, R. Aebersold, and G. S. Withers. 1993. $Glu^{280}$ is the nucleophile in the active site of Clostridium thermocellum CelC, a family A endo-${\beta}$-1,4-glucanase. J. Biol. Chem. 268: 14096-14102
  30. Wang, S. Y., S. J. Wu, G. Thottappilly, R. Locy, and N. Singh. 2001. Molecular cloning and structural analysis of the gene encoding Bacillus cereus exochitinase Chi36. J. Biosci. Bioeng. 92: 59-66 https://doi.org/10.1263/jbb.92.59
  31. Wong, K. K. Y. and J. N. Saddler. 1993. Applications of hemicellulases in the food, feed, and pulp and paper industries, pp. 127-143. In M. P. Coughlan and G. P. Hazlewood (eds.), Hemicellulose and Hemicellulases. Portland Press Ltd., London
  32. Xu, B., D. Sellos, and J. C. Janson. 2002. Cloning and expression in Pichia pastoris of a blue mussel (Mytilus edulis) ${\beta}$-mannanase gene. Eur. J. Biochem. 269: 1753-1760 https://doi.org/10.1046/j.1432-1327.2002.02824.x
  33. Yang, P., P. Shi, Y. Wang, Y. Bai, K. Meng, H. Luo, T. Yuan, and B. Yao. 2007. Cloning and overexpression of a Paenibacillus $\beta$- glucanase in Pichia pastoris: Purification and characterization of the recombinant enzyme. J. Microbiol. Biotechnol. 17: 58-66
  34. Yoshida, S., Y. Sako, and A. Uchida. 1998. Cloning, sequence analysis, and expression in Escherichia coli of a gene coding for an enzyme from Bacillus circulans K-1 that degrades guar gum. Biosci. Biotech. Biochem. 62: 514-520 https://doi.org/10.1271/bbb.62.514
  35. Yosida, S., Y. Sako, and A. Uchida. 1997. Purification, properties, and N-terminal amino acid sequence of guar gum-degrading enzyme from Bacillus circulans K-1. Biosci. Biotech. Biochem. 61: 251-255 https://doi.org/10.1271/bbb.61.251