References
- Compant, S., B. Reiter, A. Sessitsch, J. Nowak, C. Clement, and E. A. Barka. 2005. Endophytic colonization of Vitis vinifera L. by plant growth-promoting bacterium Burkholderia sp. strain PsJN. Appl. Environ. Microbiol. 71: 1685-1693 https://doi.org/10.1128/AEM.71.4.1685-1693.2005
- Daubaras, D. L., C. E. Danganan, A. Hubner, R. W. Ye, W. Hendrickson, and A. M. Chakrabarty. 1996. Biodegradation of 2,4,5-trichlorophenoxyacetic acid by Burkholderia cepacia strain AC1100: Evolutionary insight. Gene 179: 1-8 https://doi.org/10.1016/S0378-1119(96)00326-5
- Estrada-de los Santos, P., R. Bustillos-Cristales, and J. Caballero-Mellado. 2001. Burkholderia, a genus rich in plantassociated nitrogen fixers with wide environmental and geographic distribution. Appl. Environ. Microbiol. 67: 2790-2798 https://doi.org/10.1128/AEM.67.6.2790-2798.2001
- Estrada, P., P. Mavingui, B. Cournoyer, F. Fontaine, J. Balandreau, and J. Caballero-Mellado. 2002. A N2-fixing endophytic Burkholderia sp. associated with maize plants cultivated in Mexico. Can. J. Microbiol. 48: 285-294 https://doi.org/10.1139/w02-023
- Gillis, M., V. Tran Van, R. Bardin, M. Goor, P. Hebbar, A. Willems, P. Segers, K. Kerster, T. Heulin, and M. P. Fernandez. 1995. Polyphasic taxonomy in the genus Burkholderia leading to an emended description of the genus and proposition of Burkholderia vietnamiensis sp. nov. for N2-fixing isolates from rice in Vietnam. Int. J. Syst. Bacteriol. 45: 274-289 https://doi.org/10.1099/00207713-45-2-274
- He, X. S. and C. Fuqua. 2006. Rhizosphere communication: Quorum sensing by the rhizobia. J. Microbiol. Biotechnol. 16: 1661-1677
- Higgins, D. G., A. J. Bleasby, and R. Fuchs. 1992. CLUSTAL V: Improved software for multiple sequence alignment. CABIOS 8: 189-191
- Jung, S. J., K. H. Jang, E. H. Sihn, S. K. Park, and C. H. Park. 2005. Characteristics of sulfur oxidation by a newly isolated Burkholderia spp. J. Microbiol. Biotechnol. 15: 716-721
- Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111-120 https://doi.org/10.1007/BF01731581
- Kumar, S., K. Tamura, and M. Nei. 2004. MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform. 5: 150-163 https://doi.org/10.1093/bib/5.2.150
- Laurent, P., L. Buchon, J. F. Guespin-Michel, and N. Orange. 2000. Production of pectate lyases and cellulases by Chryseomonas luteola strain MFCL0 depends on the growth temperature and the nature of the culture medium: Evidence for two critical temperatures. Appl. Environ. Microbiol. 66: 1538-1543 https://doi.org/10.1128/AEM.66.4.1538-1543.2000
- Lee, D. S., M. W. Lee, S. H. Woo, and J. M. Park. 2005. Effects of salicylate and glucose on biodegradation of phenanthrene by Burkholderia cepacia PM07. J. Microbiol. Biotechnol. 15: 859- 865
- Lee, C. H., M. W. Kim, H. S. Kim, J. H. Ahn, Y. S. Yi, K. R. Kang, Y. D. Yoon, G. J. Choi, K. Y. Cho, and Y. H. Lim. 2006. An antifungal property of Burkholderia ambifaria against phytopathogenic fungi. J. Microbiol. Biotechnol. 16: 465-468
- Li, W., D. P. Roberts, S. L. F. Meyer, S. Lohrke, R. D. Lumdsen, and K. P. Hebbar. 2002. Broad spectrum anti-biotic activity and disease suppression by the potential biocontrol agent Burkholderia ambifaria BC-F. Crop Prot. 21: 29-135
- Mahenthiralingam, E., A. Baldwin, and P. Vandamme. 2002. Burkholderia cepacia complex infection in patients with cystic fibrosis. J. Med. Microbiol. 51: 533-538 https://doi.org/10.1099/0022-1317-51-7-533
- Payne, G. W., P. Vandamme, S. H. Morgan, J. J. LiPuma, T. Coenye, A. J. Weightman, T. H. Jones, and E. Mahenthiralingam. 2005. Development of a recA gene-based identification approach for the entire Burkholderia genus. Appl. Environ. Microbiol. 71: 3917-3927 https://doi.org/10.1128/AEM.71.7.3917-3927.2005
- Payne, G. W., A. Ramette, H. L. Rose, A. J. Weightman, T. H. Jones, J. M. Tiedje, and E. Mahenthiralingam. 2006. Application of a recA gene-based identification approach to the maize rhizosphere reveals novel diversity in Burkholderia species. FEMS Microbiol. Lett. 259: 126-132 https://doi.org/10.1111/j.1574-6968.2006.00257.x
- Poonguzhali, S., M. Madhaiyan, and T. M. Sa. 2006. Cultivation-dependent characterization of rhizobacterial communities from field grown Chinese cabbage Brassica campestris ssp. pekinensis and screening of potential plant growth promoting bacteria. Plant Soil 286: 167-180 https://doi.org/10.1007/s11104-006-9035-1
- Poonguzhali, S., M. Madhaiyan, and T. M. Sa. 2007. Quorumsensing signals produced by plant-growth promoting Burkholderia strains under in vitro and in planta conditions. Res. Microbiol. 158: 287-294 https://doi.org/10.1016/j.resmic.2006.11.013
- Reis, V. M., P. Estrada-de los Santos, S. Tenorio-Salgado, J. Vogel, M. Stoffels, S. Guyon, P. Mavingui, V. L. D. Baldani, M. Schmid, J. I. Baldani, J. Balandreau, A. Hartmann, and J. Caballero-Mellado. 2004. Burkholderia tropica sp. nov., a novel nitrogen-fixing, plant-associated bacterium. Int. J. Syst. Bacteriol. 54: 2155-2162 https://doi.org/10.1099/ijs.0.02879-0
- Saitou, N. and M. Nei. 1987. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425
- Schwyn, B. and J. Neilands. 1987. Universal chemical assay for the detection and determination of siderophores. Anal. Chem. 160: 47-56
- Seldin, L. and D. Dubnau. 1985. Deoxyribonucleic acid homology among Bacillus polymyxa, Bacillus macerans, Bacillus azotofixans, and other nitrogen-fixing Bacillus strains. Int. J. Syst. Bacteriol. 35: 151-154 https://doi.org/10.1099/00207713-35-2-151
- Shaharoona, B., G. M. Jamro, Z. A. Zahir, M. Arshad, and K. S. Memon. 2007. Effectiveness of various Pseudomonas spp. and Burkholderia caryophylli containing ACC-deaminase for improving growth and yield of wheat (Triticum aestivum L.). J. Microbiol. Biotechnol. 17: 1300-1307
- Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positionspecific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680 https://doi.org/10.1093/nar/22.22.4673
- Vandamme, P., B. Holmes, M. Vancanneyt, T. Coenye, B. Hoste, R. Coopman, H. Revets, S. Lauwers, M. Gillis, K. Kersters, and J. R. Govan. 1997. Occurrence of multiple genomovars of Burkholderia cepacia in cystic fibrosis patients and proposal of Burkholderia multivorans sp. nov. Int. J. Syst. Bacteriol. 47: 1188-1200 https://doi.org/10.1099/00207713-47-4-1188
- Vial, L., M. C. Groleau, V. Dekimpe, and E. Déziel. 2007. Burkholderia diversity and versatility: An inventory of the extracellular products. J. Microbiol. Biotechnol. 17: 1407-1429