N-phenylbenzenesulfonamide 유도체들에 의한 시들음병균(Fusarium oxysporum)의 살균활성에 관한 3D-QSARs 분석

3D-QSARs Analysis on the Fungicidal Activity with N-phenylbenzenesulfonamide Analogues against Fusarium wilt (Fusarium oxysporum)

  • 성민규 (충남대학교 농업생명과학대학 응용생물화학부) ;
  • 황태연 (충남대학교 농업생명과학대학 응용생물화학부) ;
  • 강규염 (경상대학교 농업생명과학대학 환경생명화학) ;
  • 성낙도 (충남대학교 농업생명과학대학 응용생물화학부)
  • Soung, Min-Gyu (Division of Applied Biology and Chemistry, College of Agriculture and Life Science, Chungnam National University) ;
  • Hwang, Tae-Yeon (Division of Applied Biology and Chemistry, College of Agriculture and Life Science, Chungnam National University) ;
  • Kang, Kyu-Young (Division of Applied Life Science, Gyeongsang National University) ;
  • Sung, Nack-Do (Division of Applied Biology and Chemistry, College of Agriculture and Life Science, Chungnam National University)
  • 발행 : 2008.03.31

초록

시들음병균(Fusarium oxysporum)의 살균활성에 관한 N-phenylbenzenesulfonamide 유도체들의 3차원적인 정량적 구조-활성관계(3D-QSARs)들을 비교 분자장 분석(CoMFA)과 비교분자 유사성 지수분석(CoMSIA) 방법으로 각각 검토하였다. 전반적으로 CoMFA 모델들이 CoMSIA 모델들 보다 좋은 통계값을 나타내었다. 그리고 최적의 CoMFA 2 모델($r^2\;_{cv.}=0.523$$r^2\;_{ncv.}=0.956$)의 정보에 따라 살균활성은 주로 정전기장에 의존적이었다. 또한 최적의 CoMFA 2 모델에 의한 등고도 분석결과로부터 N-phenyl 고리상 R4-치환기의 입체성과 양전하를 선호하는 성질이 시들음병균의 살균활성에 기여할 것으로 예상되었다.

3D-QSARs on the fungicidal activity with N-phenylbenzenesulfonamide and N-phenyl-2-thienylsul-fonamide analogues (1-34) against Fusarium wilt (Fusarium oxysporum) were discussed quantitatively using CoMFA (comparative molecular field analysis) and CoMSIA (comparative molecular similarity indices analysis) methods, respectively. Generally, the CoMFA models have better predictability and fitness than the CoMSIA models. The fungicidal activities, according to the information of the optimized CoMF A 2 model $(r^2\;_{cv.}=0.523\;&\;r^2\;_{ncv.}=0.956)$, were dependent on the electrostatic field of the N-phenylbenzenesulfonamide analogues. Therefore, from the results of graphical analyses on the contour maps with the optimized CoMFA 2 model, it is expected that the characters of $R_4-substituents$ on the N-phenyl ring as steric and positive charge favor will contribute to the fungicidal activity against Fusarium wilt.

키워드

참고문헌

  1. Bouissane, L., El Kazzouli, S., Léonce, S., Pfeiffer, B., Rakib, E. M and Khouili, M., (2006) Synthesis and biological evaluation of N-(7-indazolyl)benzenesulfonamide derivatives as potent cell cycle inhibitors. Bioorg. Med. Chem. 14, 1078-88 https://doi.org/10.1016/j.bmc.2005.09.037
  2. Melagraki, G., Afantitis, A., Sarimveis, H., Igglessi- Markopoulou, O and Supuran, C. T., (2006) QSAR study on para-substituted aromatic sulfonamides as carbonic anhydrase II inhibitors using topological information indices. Bioorg. Med. Chem. 14, 1108-1114 https://doi.org/10.1016/j.bmc.2005.09.038
  3. Vullo, D., Steffansen, B., Brodin, B., Supuran, C. T., Scozzafava, A and Nielsen, C. U., (2006) Carbonic anhydrase inhibitors: Transepithelial transport of thioureido sulfonamide inhibitors of the cancer-associated isozyme IX is dependent on efflux transporters. Bioorg. Med. Chem. 14, 2418-2427 https://doi.org/10.1016/j.bmc.2005.11.019
  4. Sherif, A and Rostom, F., (2006) Synthesis and in vitro antitumor evaluation of some indeno[1,2-c]pyrazol(in)es substituted with sulfonamide, sulfonylurea(-thiourea) pharmacophores, and some derived thiazole ring systems. Bioorg. Med. Chem. 14, 6475-6485 https://doi.org/10.1016/j.bmc.2006.06.020
  5. Santos, M. A., Marques, S. M., Tuccinardi, T., Carelli, P., Panelli, L and Rossello, A., (2006) Design, synthesis and molecular modeling study of iminodiacetyl monohydroxamic acid derivatives as MMP inhibitors. Bioorg. Med. Chem. 14, 7539-7550 https://doi.org/10.1016/j.bmc.2006.07.011
  6. Ortqvist, P., Peterson, S. D., Åkerblom, E., Gossas, T., Sabnis, Y. A., Fransson, R., Lindeberg, G., Danielson, U. H., Karlén, A and Sandström, A., (2007) Phenylglycine as a novel P2 scaffold in hepatitis C virus NS3 protease inhibitors. Bioorg. Med. Chem. 15, 1448-1474 https://doi.org/10.1016/j.bmc.2006.11.003
  7. Ozbek, N., Katírcíoglu, H., Karacan, N and Baykal T., (2007) Synthesis, characterization and antimicrobial activity of new aliphatic sulfonamide. Bioorg. Med. Chem. 15, 5105-5109 https://doi.org/10.1016/j.bmc.2007.05.037
  8. Lu, R. J., Tucker, J. A., Zinevitch, T., Kirichenko, O., Konoplev, V., Kuznetsova, S., Sviridov, S., Pickens, J., Tandel, S., Brahmachary, E., Yang, Y., Wang, J., Freel, S., Fisher, S., Sullivan, A., Zhou, J., Stanfield-Oakley, S., Greenberg, M., Bolognesi, D., Bray, B., Koszalka, B., Jeffs, P., Khasanov, A., Ma, Y. A., Jeffries, C., Liu, C., Proskurina, T., Zhu, T., Chucholowski, A., Li, R and Sexton C. (2007) Design and Synthesis of Human Immunodeficiency Virus Entry Inhibitors: Sulfonamide as an Isostere for the $\alpha$-Ketoamide Group. J. Med. Chem. 50, 6535-6544 https://doi.org/10.1021/jm070650e
  9. Chohan, Z. H. and Naseer, M. M. (2007) Metal-based sulfonamides: synthesis, characterization, antibacterial, antifungal and cytotoxic properties of pyrrolyl- and thienylderived compounds. Appl. Organometal. Chem. 21, 728-738 https://doi.org/10.1002/aoc.1279
  10. Bell, B. M., Fanwick, P. E., Graupner, P. R. and Roth, G. A. (2006) Application of the Tisler Triazolopyrimidine Cyclization to the Synthesis of a Crop Protection Agent and an Intermediate. Organic Process Research & Development. 10, 1167-1171 https://doi.org/10.1021/op0601518
  11. Mukta, J., Sunita, M. and Singh, R. V. (2004) Synthesis, structural studies and some biological aspects, including nematicidal and insecticidal properties, of organotin (IV) complexes formed with biologically active sulfonamide imine ligand. Appl. Organometal. Chem. 18, 471-479 https://doi.org/10.1002/aoc.711
  12. El-Sharief, A. M. Sh. and Al-Raqa, S. Y. (2007) New Types of Mono and Bis Sulfonamides, Tosylamino Acids and Thiosulfonic Ester Derived from Xanthotoxin, Bergapten and Visnagin with Biological Interest. Phosphorus, Sulfur, and Silicon. 182, 1557-1580 https://doi.org/10.1080/10426500701263521
  13. Saiz-Urra, L., Gonzalez, M. P., Collado, I. G. and Hernandez- Galan, R. (2007) Quantitative structure-activity relationship studies for the prediction of antifungal activity of Narylbenzenesulfonylamides against Botrytis cinerea. J. Mol. Graphics & Model. 25, 680-690 https://doi.org/10.1016/j.jmgm.2006.05.006
  14. Jang, S. C., Kang, K. Y. and Sung, N. D. (2007) CoMFA and CoMSIA analysis on the fungicidal activity against Dampingoff (Pythium ultimum) with N-phenyl-benzesulfonamide Analogues. Kor. J. Pesticide Sci. 11, 8-17
  15. Soung, M. G., Kang, K. Y., Cho, Y. G. and Sung, N. D. (2007) 3D-QSAR analysis the fungicidal activity with Nphenylbenzesulfonamide analogues against phytophthora blight (Phytophthora capsici) and prediction of higher active compounds. J. Korean Soc. Appl. Biol. Chem. 50, 192-197
  16. Akamatsu, M. (2002) Current state and perspectivies of 3DQSAR, Curr. Topics Med. Chem. 2, 1381-1394 https://doi.org/10.2174/1568026023392887
  17. Kang, J. G., Yang, D. H., Ten, L. N., Park, K. H. and Kang, K. Y. (2003) N-2-Chloro-4-nitrophenylbenzenesulfonamide derivative compounds having anti-fungal activites against phytopathogens and method for using thereof., Kor. patent. 10- 2003-0042320
  18. Kang, J. G., Yang, D. H., Ten, L. N., Park, K. H. and Kang, K. Y. (2003) N-2,6-dichloro-(4-trifluoromethyl) phenylbenzenesulfonamide derivative compounds having antifungal activites against phytopathogens and method for using thereof., Kor. patent. 10-2003-0042321
  19. Tripos, S. (2001) Molecular modeling and QSAR software on CD-Rom (Ver. 7.3), Tripos Associates, Inc., 1699 S. Hanley Road, Suite 303, St. Louis, MO. 63144-2913, U.S.A
  20. Purcell, W. P. and Singer, J. A. (1967) A brief review and table of semiempirical parameters used in the Hückel molecular orbital method., J. Chem. Eng. Data. 122, 235-246
  21. Marshall, G. R., Barry, C. D., Bosshard, H. E., Dammkoehler, R. A. and Dunn, D. A. (1979) In computer-assisted drug design: The conformational parameter in drug design; active analog approach (ed. Olsen, E. C. and Christoffersen, R. E.), Am. Chem. Soc, Washington, D.C. pp. 205-226
  22. Clark, M., Cramer III, R. D., Jones, D. M., Patterson, D. E. and Simeroth, P. E. (1990) Comparative molecular field analysis (CoMFA). 2. Toward its use with 3D-structural databases. Tetrahedron Comput. Methodol. 3, 47-59 https://doi.org/10.1016/0898-5529(90)90120-W
  23. Cramer, R. D., Bunce, J. D. and Patterson, D. E. (1988) Crossvalidation, Bootstrapping and partial least squares compared with multiple regression in conventional QSAR studies. Quant. Struct. Act. Relat. 7, 18-25 https://doi.org/10.1002/qsar.19880070105