References
- Cannone, J. J., S. Subramanian, M.N. Schnare, J. R. Collett, L.M. D'Souza, Y. Du, B. Feng, N. Lin, L.V. Madabusi, K.M. Muller, N. Pande, Z. Shang, N. Yu, and R.R. Gutell. 2002. The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC Bioinformatics 3, 2 https://doi.org/10.1186/1471-2105-3-2
- Cate, J.H., M.M. Yusupov, G. Z. Yusupova, T.N. Earnest, and H. F. Noller. 1999. X-ray crystal structures of 70S ribosome functional complexes. Science 285, 2095-2104 https://doi.org/10.1126/science.285.5436.2095
- Cech, T.R., A.J. Zaug, and P.J. Grabowski. 1981. In vitro splicing of the ribosomal RNA precursor of Tetrahymena: involvement of a guanosine nucleotide in the excision of the intervening sequence. Cell 27, 487-96 https://doi.org/10.1016/0092-8674(81)90390-1
- Clemons, W.M. Jr., J.L. May, B.T. Wimberly, J.P. McCutcheon, M. S. Capel, and V. Ramakrishnan. 1999. Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution. Nature 400, 833-40 https://doi.org/10.1038/23631
- Dahlberg, A.E. 1989. The functional role of ribosomal RNA in protein synthesis. Cell 57, 525-529 https://doi.org/10.1016/0092-8674(89)90122-0
- Dinos, G., D.N. Wilson, Y. Teraoka, W. Szaflarski, P. Fucini, D. Kalpaxis, and K.H. Nierhaus. 2004. Dissecting the ribosomal inhibition mechanisms of edeine and pactamycin: the universally conserved residues G693 and C795 regulate P-site RNA binding. Mol. Cell. 13, 113-24 https://doi.org/10.1016/S1097-2765(04)00002-4
- Gram, H., L.A. Marconi, C.F. Barbas 3rd, T.A. Collet, R.A. Lerner, and A. S. Kang. 1992. In vitro selection and affinity maturation of antibodies from a naive combinatorial immunoglobulin library. Proc. Natl. Acad. Sci. USA 89, 3576-80
- Gutell, R.R., N. Larsen, and C.R. Woese. 1994. Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective. Microbiol. Rev. 58, 10-26
- Higuchi, R. 1989. Using PCR to engineer DNA. p. 61-70. In PCR Technology (Erlich, H.A., ed.), Stockton Press, New York
- Lee, K., C.A. Holland-Staley, and P.R. Cunningham. 1996. Genetic analysis of the Shine-Dalgarno interaction: selection of alternative functional mRNA-rRNA combinations. RNA 2, 1270- 1285
- Lee, K., S. Varma, J. Santalucia Jr., and P.R. Cunningham. 1997. In vivo determination of RNA structure-function relationships: analysis of the 790 loop in ribosomal RNA. J. Mol. Biol. 269, 732-743 https://doi.org/10.1006/jmbi.1997.1092
-
Lee, K., C.A. Holland-Staley, and P.R. Cunningham. 2001. Genetic approaches to studying protein synthesis: effects of mutations at
$\psi$ 516 and A535 in Escherichia coli 16S rRNA. J. Nutr. 131, 2994S-3004S https://doi.org/10.1093/jn/131.11.2994S - Moazed, D. and H.F. Noller. 1986. Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes. Cell 47, 985-994 https://doi.org/10.1016/0092-8674(86)90813-5
- Moazed, D. and H.F. Noller. 1987. Interaction of antibiotics with functional sites in 16S ribosomal RNA. Nature 327, 389-394 https://doi.org/10.1038/327389a0
- Moazed, D., R.R. Samaha, C. Gualerzi, and H.F. Noller. 1995. Specific protection of 16 S rRNA by translational initiation factors. J. Mol. Biol. 248, 207-210
- Noller, H.F. 1991. Ribosomal RNA and translation. Ann. Rev. Biochem. 60, 191-227 https://doi.org/10.1146/annurev.bi.60.070191.001203
- Szatkiewicz, J. P., H. Cho, S.-M. Ryou, J.-M. Kim, P. R. Cunningham, and K. Lee. 2006. Genetic analysis of a structural motif within the conserved 530 stem-loop of Escherichia coli 16S rRNA. J. Mocrobiol. Biotechnol. 16, 569-575
- Tapprich, W.E., D. J. Goss, and A.E. Dahlberg. 1989. Mutation at position 791 in Escherichia coli 16S ribosomal RNA affects processes involved in the initiation of protein synthesis. Proc. Natl. Acad. Sci. USA 86, 4927-4931