Solution Structure of a GSK 3$\beta$ Binding Motif, A $AXIN^{pep}$

  • Kim, Yong-Chul (Dept. of Biochemistry and Protecin Network Research Center, Yonsei University) ;
  • Jung, JIn-Won (Dept. of Biochemistry and Protecin Network Research Center, Yonsei University) ;
  • Park, Hee-Yong (Dept. of Biochemistry and Protecin Network Research Center, Yonsei University) ;
  • Kim, Hyun-Yi (Protecin Network Research Center, Yonsei University) ;
  • Lee, Weon-tae (Dept. of Biotechnology, Yonsei University)
  • Published : 2005.06.20

Abstract

Axin is a scaffold protein of the APC/axin/GSK complex, binding to all of the other signalling components. Axin interacts with Glycogen synthase kinase 3$\beta$ (GSK 3$\beta$) and functions as a negative regulator of Wnt signalling pathways. To determine the solution structure of the GSK3$\beta$ binding regions of the axin, we initiated NMR study of axin fragment comprising residues 3$Val^{388} - Arg^{401}$using circular dichroism (CD) and two-dimensional NMR spectroscopy. The CD spectra of 3$axin^{pep}$ in the presence of 30% TFE displayed a standard 3$\alpha$-helical conformation, exhibiting the bound structure of 3$axin^{pep}$ to GSK3$\bata$. On the basis of experimental restraints including $NOE_s$, and $^3J_{HN\alpha} $ coupling constants, the solution conformation of $axin^{pep}$ was determined with program CNS. The 20 lowest energy structures were selected out of 50 final simulated-annealing structures in both water and TFE environment, respectively. The $RMSD_s$ for the 20 structures in TFE solution were 0.086 nm for backbone atoms and 0.195 nm for all heavy atoms, respectively. The Ramachandran plot indicates that the $\varphi$, $\psi$ angles of the 20 final structures is properly distributed in energetically acceptable regions. $Axin^pep$ in aqueous solutions consists of a stable $\alpha$-helix spanning residues form $Glu^{391}$ to $Val^{391} $, which is an interacting motif with GSK3$\beta$.

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