Proteome Analysis of Amniotic Fluid by gradient 2-D PAGI

Gradient 2-D PAGE를 이용한 양수 프로테옴 분석

  • 이은희 (아주대학교 화학생물공학부 생명공학전공) ;
  • 김재찬 (중앙대학교 용산부속병원 안과학교실) ;
  • 변상요 (아주대학교 화학생물공학부 생명공학전공)
  • Published : 2003.02.01

Abstract

Analysis of proteome in amniotic fluid was performed by 2-D PAGE (polyacrylamide gel electrophoresis). Proteins in amniotic fluid were separated by centrifugation and solubilized in buffer solution for IEF, using an IPG strip of pH 4-7L. Both a homogeneous slab gel of 12.5% and a gradient gel of 8-18%, were used. After 2-D PAGE, spots were stained with silver nitrate and picked up for in-gel digestion. Digested peptides were analyzed by MALDI-TOF and proteins were further identifical. More protein spots were detected in the gradient gels and a protein not previously reported was identified.

양수 내에 존재하는 총 단백질을 이차원 전기영동을 이용하여 분리 분석하였고, gradient gel을 이용하여 양수 내에 소량으로 존재하는 미세 단백질까지 분리하였다. 양수 내에는 고농도로 존재하는 단백질이 있는데 이것이 serum albumin precursor임을 확인하였고, 8-18% gradient gel의 이용으로 분해능(resolution)이 향상되어 미세 단백질을 분리 분석할 수 있었다. 이차원 전기영동 후 MALDI-TOF를 이용하여 단백질을 identification하여 기존의 양수 protein database에 존재하는 단백질을 확인하였고, 존재하지 않는 새로운 단백질을 분리 분석하였다.

Keywords

References

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