• Title/Summary/Keyword: weighted edit distance

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Context-Weighted Metrics for Example Matching (문맥가중치가 반영된 문장 유사 척도)

  • Kim, Dong-Joo;Kim, Han-Woo
    • Journal of the Institute of Electronics Engineers of Korea CI
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    • v.43 no.6 s.312
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    • pp.43-51
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    • 2006
  • This paper proposes a metrics for example matching under the example-based machine translation for English-Korean machine translation. Our metrics served as similarity measure is based on edit-distance algorithm, and it is employed to retrieve the most similar example sentences to a given query. Basically it makes use of simple information such as lemma and part-of-speech information of typographically mismatched words. Edit-distance algorithm cannot fully reflect the context of matched word units. In other words, only if matched word units are ordered, it is considered that the contribution of full matching context to similarity is identical to that of partial matching context for the sequence of words in which mismatching word units are intervened. To overcome this drawback, we propose the context-weighting scheme that uses the contiguity information of matched word units to catch the full context. To change the edit-distance metrics representing dissimilarity to similarity metrics, to apply this context-weighted metrics to the example matching problem and also to rank by similarity, we normalize it. In addition, we generalize previous methods using some linguistic information to one representative system. In order to verify the correctness of the proposed context-weighted metrics, we carry out the experiment to compare it with generalized previous methods.

Approximate Periods of Strings based on Distance Sum for DNA Sequence Analysis (DNA 서열분석을 위한 거리합기반 문자열의 근사주기)

  • Jeong, Ju Hui;Kim, Young Ho;Na, Joong Chae;Sim, Jeong Seop
    • KIPS Transactions on Software and Data Engineering
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    • v.2 no.2
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    • pp.119-122
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    • 2013
  • Repetitive strings such as periods have been studied vigorously in so diverse fields as data compression, computer-assisted music analysis, bioinformatics, and etc. In bioinformatics, periods are highly related to repetitive patterns in DNA sequences so called tandem repeats. In some cases, quite similar but not the same patterns are repeated and thus we need approximate string matching algorithms to study tandem repeats in DNA sequences. In this paper, we propose a new definition of approximate periods of strings based on distance sum. Given two strings $p({\mid}p{\mid}=m)$ and $x({\mid}x{\mid}=n)$, we propose an algorithm that computes the minimum approximate period distance based on distance sum. Our algorithm runs in $O(mn^2)$ time for the weighted edit distance, and runs in O(mn) time for the edit distance, and runs in O(n) time for the Hamming distance.

Finding Approximate Covers of Strings (문자열의 근사커버 찾기)

  • Sim, Jeong-Seop;Park, Kun-Soo;Kim, Sung-Ryul;Lee, Jee-Soo
    • Journal of KIISE:Computer Systems and Theory
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    • v.29 no.1
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    • pp.16-21
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    • 2002
  • Repetitive strings have been studied in such diverse fields as molecular biology data compression etc. Some important regularities that have been studied are perods, covers seeds and squares. A natural extension of the repetition problems is to allow errors. Among the four notions above aproximate squares and approximate periodes have been studied. In this paper, we introduce the notion of approximate covers which is an approximate version of covers. Given two strings P(|P|=m) and T(|T|=n) we propose and algorithm with finds the minimum distance t such that P is a t-approximate cover of T. The algorithm take O(m,n) time for the edit distance and $O(mn^2)$ time of finding a string which is an approximate cover of T is minimum distance is NP-complete.