• Title/Summary/Keyword: visualization technique

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Measurement of Brownian motion of nanoparticles in suspension using a network-based PTV technique

  • Banerjee A.;Choi C. K.;Kihm K. D.;Takagi T.
    • 한국가시화정보학회:학술대회논문집
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    • 2004.12a
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    • pp.91-110
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    • 2004
  • A comprehensive three-dimensional nano-particle tracking technique in micro- and nano-scale spatial resolution using the Total Internal Reflection Fluorescence Microscope (TIRFM) is discussed. Evanescent waves from the total internal reflection of a 488nm argon-ion laser are used to measure the hindered Brownian diffusion within few hundred nanometers of a glass-water interface. 200-nm fluorescence-coated polystyrene spheres are used as tracers to achieve three-dimensional tracking within the near-wall penetration depth. A novel ratiometric imaging technique coupled with a neural network model is used to tag and track the tracer particles. This technique allows for the determination of the relative depth wise locations of the particles. This analysis, to our knowledge is the first such three-dimensional ratiometric nano-particle tracking velocimetry technique to be applied for measuring Brownian diffusion close to the wall.

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A Diagnostic Technique for the Air Flow Characteristics in Refrigerators using PIV (PIV에 의한 냉장고 기류특성 평가방법)

  • Kim, Seok-Ro;Doh, Deog-Hee;Lee, Jae-Keun;Kim, Kyung-Chun
    • Proceedings of the SAREK Conference
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    • 2007.11a
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    • pp.576-584
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    • 2007
  • A PIV(Particle Imaging Velocimetry) diagnostic technique for the evaluation of the flow characteristics in refrigerator is introduced. Smoke particles of which density is small enough to follow up the air flow are used for visualization of the air flows in the refrigerators. A rectangular room model is tested for the verifications of the dignostic technique. By evaluating the turbulent intensity and the deviation value of the turbulent intensity distribution that were obtained from PIV results, an optimal ventilating condition is suggested. The constructed technique is used for the diagnostics on the flow of an actual refrigerator. It has experimentally proved that the present technique is able to evaluate the ventilation conditions of refrigerators.

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Multi GPU Based Image Registration for Cerebrovascular Extraction and Interactive Visualization (뇌혈관 추출과 대화형 가시화를 위한 다중 GPU기반 영상정합)

  • Park, Seong-Jin;Shin, Yeong-Gil
    • Journal of KIISE:Computing Practices and Letters
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    • v.15 no.6
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    • pp.445-449
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    • 2009
  • In this paper, we propose a computationally efficient multi GPU accelerated image registration technique to correct the motion difference between the pre-contrast CT image and post-contrast CTA image. Our method consists of two steps: multi GPU based image registration and a cerebrovascular visualization. At first, it computes a similarity measure considering the parallelism between both GPUs as well as the parallelism inside GPU for performing the voxel-based registration. Then, it subtracts a CT image transformed by optimal transformation matrix from CTA image, and visualizes the subtracted volume using GPU based volume rendering technique. In this paper, we compare our proposed method with existing methods using 5 pairs of pre-contrast brain CT image and post-contrast brain CTA image in order to prove the superiority of our method in regard to visual quality and computational time. Experimental results show that our method well visualizes a brain vessel, so it well diagnose a vessel disease. Our multi GPU based approach is 11.6 times faster than CPU based approach and 1.4 times faster than single GPU based approach for total processing.

Creating a High-Definition Animation of Tsunami Propagation (지진해일 수치실험 결과의 고해상도 에니메이션 생성)

  • Kim, Kyeong-Ok;Yuk, Jin-Hee;Min, Byung-Il;Choi, Byung-Ho
    • Journal of Korean Society of Coastal and Ocean Engineers
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    • v.23 no.5
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    • pp.327-334
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    • 2011
  • Simulation of the trans-oceanic or trans-basin propagation of a tsunami is a computer-intensive task. This study demonstrates an effective and detailed visualization technique to deal with the vast amount of surface-elevation and velocity-field output. This high-definition visualization technique is used to present simulations of the 1960 and 2010 Chilean earthquake tsunamis and the 1983 Central East (Japan) Sea earthquake tsunami. This tsunami-visualization method using high-definition graphic animation is an appropriate tool to show detailed tsunami-propagation behavior over an ocean or coastal sea, as exemplified by the Pacific Ocean and East (Japan) Sea tsunami events.

Interactive Visualization Technique for Adaptive Mesh Refinement Data Using Hierarchical Data Structures and Graphics Hardware (계층적 자료구조와 그래픽스 하드웨어를 이용한 적응적 메쉬 세분화 데이타의 대화식 가시화)

  • ;Chandrajit Bajaj
    • Journal of KIISE:Computer Systems and Theory
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    • v.31 no.5_6
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    • pp.360-370
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    • 2004
  • Adaptive mesh refinement(AMR) is one of the popular computational simulation techniques used in various scientific and engineering fields. Although AMR data is organized in a hierarchical multi-resolution data structure, traditional volume visualization algorithms such as ray-casting and splatting cannot handle the form without converting it to a sophisticated data structure. In this paper, we present a hierarchical multi-resolution splatting technique using k-d trees and octrees for AMR data that is suitable for implementation on the latest consumer PC graphics hardware. We describe a graphical user interface to set transfer function and viewing / rendering parameters interactively. Experimental results obtained on a general purpose PC equipped with an nVIDIA GeForce3 card are presented to demonstrate that the proposed techniques can interactively render AMR data(over 20 frames per second). Our scheme can easily be applied to parallel rendering of time-varying AMR data.

Effective Volume Rendering and Virtual Staining Framework for Visualizing 3D Cell Image Data (3차원 세포 영상 데이터의 효과적인 볼륨 렌더링 및 가상 염색 프레임워크)

  • Kim, Taeho;Park, Jinah
    • Journal of the Korea Computer Graphics Society
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    • v.24 no.1
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    • pp.9-16
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    • 2018
  • In this paper, we introduce a visualization framework for cell image data obtained from optical diffraction tomography (ODT), including a method for representing cell morphology in 3D virtual environment and a color mapping protocol. Unlike commonly known volume data sets, such as CT images of human organ or industrial machinery, that have solid structural information, the cell image data have rather vague information with much morphological variations on the boundaries. Therefore, it is difficult to come up with consistent representation of cell structure for visualization results. To obtain desired visual representation of cellular structures, we propose an interactive visualization technique for the ODT data. In visualization of 3D shape of the cell, we adopt a volume rendering technique which is generally applied to volume data visualization and improve the quality of volume rendering result by using empty space jittering method. Furthermore, we provide a layer-based independent rendering method for multiple transfer functions to represent two or more cellular structures in unified render window. In the experiment, we examined effectiveness of proposed method by visualizing various type of the cell obtained from the microscope which can capture ODT image and fluorescence image together.

DNA Sequence Visualization with k-convex Hull (k-convex hull을 이용한 DNA 염기 배열의 가시화)

  • Kim, Min Ah;Lee, Eun Jeong;Cho, Hwan Gyu
    • Journal of the Korea Computer Graphics Society
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    • v.2 no.2
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    • pp.61-68
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    • 1996
  • In this paper we propose a new visualization technique to characterize qualitative information of a large DNA sequence. While a long DNA sequence has huge information, it is not easy to obtain genetic information from the DNA sequence. We transform DNA sequences into a polygon to compute their homology in image domain rather than text domain. Our program visualizes DNA sequences with colored random walk plots and simplify them k-convex hulls. A random walk plot represents DNA sequence as a curve in a plane. A k-convex hull simplifies a random work plot by removing some parts of its insignificant information. This technique gives a biologist an insight to detect and classify DNA sequences with easy. Experiments with real genome data proves our approach gives a good visual forms for long DNA sequences for homology analysis.

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X-ray Micro-imaging of Arsenic Absorption of Sap Flow in Xylem Vessels of Pteris (X-ray 영상기법을 이용한 비소 흡수가 고사리 내부 수액 거동에 미치는 영향 연구)

  • Lee, Jin-Pyoung;Lee, Sang-Joon
    • Journal of the Korean Society of Visualization
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    • v.5 no.1
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    • pp.30-36
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    • 2007
  • The global environment is deteriorating at an alarming rate, despite of enhanced international environmental regulation. Many studies have been performed to reduce toxic pollutants. Recently, plant-based phytoremediation technology for moving toxic contaminants from soil and water has been receiving large attention. Arsenic-contaminated soil is one of the major pollutant sources for drinking water. Pteris erotica has been known as a hyper-accumulator of arsenic from soils. In this study, we investigated the effect of arsenic absorption on sap flow inside xylem vessels of Pteris. The synchrotron X-ray micro-imaging technique was employed to monitor the refilling process of water containing arsenic inside the xylem vessels of Pteris's leaves and stems non-invasively. The captured phase-contrast X-ray images show both anatomy of internal structure and transport of water inside Pteris. The exposure of Pteris to arsenic solution was found to increase largely the water raise speed in xylem vessels. The present results would provide important information needed for understanding the mechanisms of accumulation and transportation of toxic materials in plants.