• Title/Summary/Keyword: transformation region

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Genetic Variation of Rice Populations Estimated Using nrDNA ITS Region Sequence

  • Wang, Dong;Hong, Soon-Kwan
    • Korean Journal of Plant Resources
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    • v.27 no.3
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    • pp.249-255
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    • 2014
  • The rice belonging to Oryza sativa is not only has significant economic importance, for it is the major source of nutrition for about 3 billion all around the world. But also plays a vital role as a model organism, because it has a number of advantages to be a model plant, such as efficient transformation system and small genome size. Many methods and techniques have been conducted to attempt to distinguish different Oryza sativa species, such as amplified fragment length polymorphism (AFLP), random amplified polymorphic DNA (RAPD), simple sequence repeat (SSR) and so on. However, studies using sequence analysis of internal transcribed spacer (ITS), a region of ribosomal RNA has not been reported until now. This study was undertaken with an aim to understand the phylogenetic relationships among sixteen isolates of Oryza sativa collected from abroad and fifteen isolates collected from Korea, using ribosomal RNA (rRNA) internal transcribed spacer (ITS) sequences to compare the phylogeny relationships among different Oryza sativa species. The size variation obtained among sequenced nuclear ribosomal DNA (nrDNA) ITS region ranged from 515bp to 1000bp. The highest interspecific genetic distance (GD) was found between Sfejare 45 (FR12) and Anapuruna (FR15). Taebong isolate showed the least dissimilarity of the ITS region sequence with other thirty isolates. This consequence will help us further understanding molecular diversification in intra-species population and their phylogenetic analysis.

Establishment of an Efficient Agrobacterium Transformation System for Eggplant and Study of a Potential Biotechnologically Useful Promoter

  • Claudiu Magioli;Ana Paula Machado da Rocha;Pinheiro, Marcia-Margis;Martins, Gilberto-Sachetto;Elisabeth Mansur
    • Journal of Plant Biotechnology
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    • v.2 no.1
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    • pp.43-49
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    • 2000
  • An efficient and reliable Agrobacterium transformation procedure based on TDZ (thidiazuron)-induced organogenesis was established and applied to six Brazilian eggp1ant varieties. Optimum transgenic plants recovery was achieved upon the study of the following parameters affecting transformation efficiency, using F-100 variety as a model: i) explant source; ii) pre-culture period; iii) physical state of the pre-culture medium and iv) coculture conditions. The highest frequency of kanamycin-resistant calli derived from leaf explants (5%) was obtained without a pre-culture period and co-cultivation for 24 h in liquid medium followed by five days on solid RM (regeneration medium). For cotyledon explants, best results were achieved upon a pre-culture of 24 h in liquid RM and a co-cultivation period of 24 h in liquid RM followed by three days in solid RM, resulting in a transformation Sequency of 22.7%. Kanamycin-resistant organogenic calli were also obtained from cultivars Emb, Preta Comprida, Round nose Shaded, Campineira and Florida Market. The expression pattern of an epidermis-specific promoter was studied using transformants expressing a chimaeric construct comprised by the promoter Atgrp-5 transcriptionally fused to the coding region of the gus gene. The expression pattern was similar to that previously observed in tobacco and Arabidopsis thaliana, with preferential expression at the epidermis and the stem phloem. These results support the idea that the Atgrp-5 promoter can be used to drive defense genes in these tissues, which are sites of pathogen interaction and spread, in programs for the genetic improvement of eggplant.

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A Phase Transformation Study on Amorphous Diopside ($CaMgSi_2O_6$) (비정질 투휘석($CaMgSi_2O_6$)에 대한 상변이 연구)

  • 김영호
    • Journal of the Mineralogical Society of Korea
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    • v.16 no.2
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    • pp.161-169
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    • 2003
  • A phase transformation study on a synthetic amorphous diopside, $(Ca,Mg)SiO_3$has been carried out up to ∼30 GPa, and ∼$1000^{\circ}C$ using a diamond anvil cell and YAG laser heating system, respectively. A starting amorphous material shows a direct transition to cubic $(Ca,Mg)SiO_3$perovskite at high pressure, which contradicts to the crystalline diopside phase transformation sequence disproportionating into mixtures of the orthorhombic$ MgSiO_3$perovskite and the cubic $CaSiO_3$perovskite phases. This discrepancy might be due to the different starting materials as well as the temperature variations at each specific experiment performed. The present phase transfor mation sequence would modify the mineralogical assemblage in the Earth transition region and the lower mantle depending upon the pressure, temperature and the oxygen partial pressure.

Transposon piggyBac mediated Ipax6 Expression in Malaria Vector Anopheles stephensi (말라리아 매개 모기 Anopheles stephensi에서 트랜스포존 piggyBac을 이용한 Pax6 발현)

  • Koo Hyeyoung
    • Development and Reproduction
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    • v.8 no.1
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    • pp.19-25
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    • 2004
  • Pax6, a member of the highly conserved homeobox gene family, is known to be expressed in spatially and temporally restricted pattern during embryogenesis. To examine the spatial expression pattern of Pax6 in malaria vector mosquito Anopheles stephemi, in different molecular environment, the germ line transformation technique using piggyBac transposon combined with the use of Pax6 specific 3xp3-EGFP marker was utilized. Four transgenic lines with a transformation rate of 6.7% were established. Transgenes were stably expressed in subsequent several generations. The transgenic lines showed 3 different expression pattern with spatial specificity, possibly due to enhancing and/or silencing position effects. In two transgenic lines, noble expression pattern of Pax6 was observed in the region that has not been previously reported in any animal species. The results show that the tranposon piggyBac mediated germ line transformation system can be used as an efficient tool for the generation of diverse spatially restricted reporter gene expression.

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Effect of Reverse Transformation Treatment on the Formation of Retained Austenite and Mechanical Properties of C-Mn TRIP Steels (C-Mn계 TRIP강의 잔류오스테나이트 생성과 기계적 성질에 미치는 역변태처리의 영향)

  • You J. S;Hong H;Lee O. Y;Jin K. G;Kim S. J
    • Korean Journal of Materials Research
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    • v.14 no.2
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    • pp.126-132
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    • 2004
  • The high strength steel sheets has been widely used as the automobile parts to reduce the weight of a vehicle. The aim of this research is to develop the TRIP aided high strength low carbon steels using reverse transformation process. The 0.15C-4Mn and 0.15C-6.5Mn steel sheets were reversely transformed by slow heating to intercritical temperature region and air cooling to room temperature. The stability of retained austenite depends on the enrichment of carbon and manganese by diffusion during the reverse transformation. The amount of retained austenite formed after reversely transformed at $645^{\circ}C$ for 12 hrs. was about 46vol.% in hot rolled 0.lC-6.5Mn steel. The change in volume fraction of retained austenite with a holding temperature was consistent with the changes in elongation and the strength-ductility combination. The tendency of tensile strength to increase with increasing the holding temperature was due to the decrease of retained austenite after cooling from the higher temperature of $670 ^{\circ}C$. The maximum strength-ductility combination was about 4,250 kg/$\textrm{mm}^2$ㆍ% when the hot rolled 0.lC-6.5Mn steel was reversely transformed at $645^{\circ}C$ for 12 hrs.

S-XML Transformation Method for Efficient Distribution of Spatial Information on u-GIS Environment (u-GIS 환경에서 효율적인 공간 정보 유통을 위한 S-XML 변환 기법)

  • Lee, Dong-Wook;Baek, Sung-Ha;Kim, Gyoung-Bae;Bae, Hae-Young
    • Journal of Korea Spatial Information System Society
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    • v.11 no.1
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    • pp.55-62
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    • 2009
  • In u-GIS environment, we collect spatial data needed through sensor network and provide them with information real-time processed or stored. When information through Internet is requested on Web based applications, it is transmitted in XML. Especially, when requested information includes spatial data, GML, S-XML, and other document that can process spatial data are used. In this processing, real-time stream data processed in DSMS is transformed to S-XML document type and spatial information service based on web receive S-XML document through Internet. Because most of spatial application service use existing spatial DBMS as a storage system, The data used in S-XML and SDBMS needs transformation between themselves. In this paper, we propose S-XML a transformation method using caching of spatial data. The proposed method caches the spatial data part of S-XML to transform S-XML and relational spatial database for providing spatial data efficiently and it transforms cached data without additional transformation cost when a transformation between data in the same region is required. Through proposed method, we show that it reduced the cost of transformation between S-XML documents and spatial information services based on web to provide spatial information in u-GIS environment and increased the performance of query processing through performance evaluation.

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Efficient Transformation Method of Soybean Using Meristematic Tissues of Germinating Seeds (발아종자의 분열조직을 이용한 효율적인 콩 형질전환 방법)

  • Kim, Yul-Ho;Park, Hyang-Mi;Choi, Man-Soo;Sohn, Soo-In;Shin, Dong-Bum;Lee, Jang-Yong
    • Korean Journal of Breeding Science
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    • v.40 no.3
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    • pp.278-285
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    • 2008
  • An efficient transformation method for soybean [Glycine max (L.) Merr.] using meristematic tissues of germinating seeds has been established. The embryonic axes were excised from germinating seeds of Korean soybean cultivar, Iksannamulkong and 0.5-2 cm long segment containing meristematic tissues were prepared by cutting hypocotyl region. The explants were inoculated with Agrobacterium tumefaciens strain LBA4404 harboring a binary vector with the bar gene as a selectable marker gene and a ${\beta}-glucuronidase$ (GUSINT) reporter gene, and then co-cultured for 7 days on co-cultivation medium (CCM). The meristematic tissues were cultured on shoot induction medium (SIMP6) supplemented with 0.4 mg/l $N_6-benzylaminopurine$ (BAP) and 0.1 mg/l indolebutyric acid (IBA) in the presence of 6 mg/l L-phosphinotricin (PPT) for 2 weeks and the surviving explants were transferred to shoot elongation medium (SEMP6). Transformation was confirmed by Southern blot analysis and the transformation efficiencies ranged from 1.48 to 2.07%. The new modified transformation method was successfully implemented for obtaining several transgenic lines with SMV-CP gene. It is expected that this method could efficiently be used for the transformation of recalcitrant soybean cultivars.

Nucleus Segmentation and Recognition of Uterine Cervical Pop-Smears using Region Growing Technique and Backpropagation Algorithm (영역 확장 기법과 오류 역전파 알고리즘을 이용한 자궁경부 세포진 영역 분할 및 인식)

  • Kim Kwang-Baek;Kim Sung-Shin
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.10 no.6
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    • pp.1153-1158
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    • 2006
  • The classification of the background and cell areas is very important research area because of the ambiguous boundary. In this paper, the region of cell is extracted from an image of uterine cervical cytodiagnosis using the region growing method that increases the region of interest based on similarity between pixels. Segmented image from background and cell areas is binarized using a threshold value. And then 8-directional tracking algorithm for contour lines is applied to extract the cell area. First, the extracted nucleus is transformed to RGB color that is the original image. Second, the K-means clustering algorithm is employed to classify RGB pixels to the R, G, and B channels, respectively. Third, the Hue information of nucleus is extracted from the HSI models that is the transformation of the clustering values in R, G, and B channels. The backpropagation algorithm is employed to classify and identify the normal or abnormal nucleus.

Effect of Welding Condition on Microstructure of Transient Zone in Overlay Weld of 3Cr-1Mo Steel/STS-309L (3Cr-1Mo강/STS-309L 오버레이 용접부의 천이영역 조직에 미치는 용접조건의 영향)

  • 김동진;김병훈;지병하;김정태;김성곤;강정윤;박화순
    • Journal of Welding and Joining
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    • v.18 no.2
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    • pp.49-56
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    • 2000
  • Recently developed Austenite stainless steel, 309L was used to overlay on 3Cr-1Mo-V-Ti-B steels, using Electroslag welding process, which wide electrodes were adopted. Transition region in welding interlayer relating to disbonding crack was investigated. Also, the effect of welding condition on the width of transition region and coarsening grains of the austenite were studied. 1) With increasing welding speed the width of martensite at transient region was increased, but the amount of delta ferrite in weld metal was reduced, being fine grained. 2) The form of martensite at the transition region was occurred by reversible transformation during cooling since the interdiffusion of Cr and Ni from weld metal and Fe and C from base metals at the transition region, causes to lowering the concentration of Cr and Ni at the transition region, leading to increasing Ms point. 3) With increasing welding speed, the grain of austenite formed at the welding interface was finer. With increasing welding current under the same welding speed, the grain size of the austenite was finer. At high current, original grain size of the austenite is coarse, but the austenite has fine grains because the austenite was transformed to martensite during cooling. 4) In the case of high welding speed, the width of martensite at the welding interface was increased, but the grain size of austenite at the welding interface was finer. This indicates that the inhibition of disbonding crack may be achieved through dispersening fine carbides in the gain boundary.

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Hereditary Multiple Exostosis with Chondrosarcomatous Change (Report of One Case) (연골육종을 동반한 다발성 외골증 (증례보고 및 문헌고찰))

  • Hwang, M.S.;Choi, W.H.
    • Journal of agricultural medicine and community health
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    • v.8 no.1
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    • pp.88-92
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    • 1983
  • Hereditary multiple exostosis is familial disturbance in the growth of cartilagenous bone tissue, most marked at the metaphyseal region of long bone. In most of the reported cases, the disease appears to have been transmitted through the male. And chondrosarcomatous transformation of the exostotic area is not uncommon, particularly in adult subjects.

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