• Title/Summary/Keyword: subspecies

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다형질 Animal model에 의한 9개월령 한국산 전복 2 아종의 성장관련형질에 대한 유전모수 추정 (Estimation of Genetic Parameters for Growth-Related Traits in 9-month Old of Two Korean Abalone Subspecies, Haliotis discus hannai and H. discus discus, by Using Multiple Traits of Animal Model)

  • 최미경;양상근;원승환;박철지;한석중;여인규
    • 한국수산과학회지
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    • 제42권6호
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    • pp.591-599
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    • 2009
  • Genetic parameters for growth-related traits were estimated in 9-month old of two Korean abalone subspecies, Haliotis discus hannai and H. discus discus, using multiple traits of animal model. The data were collected from the records of 3,504 individuals produced from 16 sires and 17 dams in H. discus hannai and 821 individuals produced from 3 sires and 4 dams in H. discus discus, which was evaluated at the Bukjeju branch, NFRDI, from May 20, 2004 to February 14, 2005. The heritability estimates obtained from restricted maximum likelihood (REML) method range from 0.29 to 0.31 for three growth traits (shell length, shell width and body weight) in H. discus hannai and from 0.22 to 0.28 in H. discus discus, respectively. The heritabilities for shell shape and condition factor were lower than others of growth traits such as ranging from 0.03 to 0.24 in H. discus hannai and from 0.06 to 0.11 in H. discus discus, respectively. Genetic and phenotypic correlations were >0.91 between shell parameters and weight in two abalone subspecies, respectively, indicating that breeding for weight gains could be successfully achieved by selecting for shell length.

Pulsed-Field Gel Electrophoresis를 이용한 Salmonella enterica subspecies enterica bioserovar Pullorum의 분자유전학적 다양성에 관한 연구 (Genetic Diversity of Salmonella enterica subspecies enterica bioserovar Pullorum using the pulsed-field gel electrophoresis)

  • 우용구;이수화;이철현;이오수;김봉환
    • 대한수의학회지
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    • 제43권1호
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    • pp.77-86
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    • 2003
  • Pullorum disease due to Salmonella enterica subspecies enterica bioserovar Pullorum (S. pullorum) is reported to be an endemic disease in domestic poultry flocks. The pulsed-field gel electrophoresis (PFGE) subtyping method was used to assess the extent of genetic diversity and clonality of most of salmonella serotypes and other diverse bacterial species from animals and environmental samples in worldwide. Nowadays, PFGE has already been evaluated as a gold standards for molecular subtyping of salmonella serotypes compared with other molecular analysis methods. PFGE of XbaI digested chromosomal DNA from 23 strains of S. pullorum gave 5 distinctive pulsotypes (from SXPI to SXPV) with 5% confidence range of Dice coefficients, indicating that PFGE is very discriminative and that multiple clones of S. pullorum have been existed and diffused all of domestic poultry flocks industries since 1995. Two dominant pulsogroups (SXA & SXB) appeared as a major clones in this country, because they had consistently been recovered from diverse sources including both chicken organs and raw feed materials between 1995 and 1998. In addition, the matching percentage of PFGE profiles (PFP) among strains from both chickens and feed ingredients provides indirect evidence of the possible transmission of pullorum disease from contaminated raw feed ingredients for chicken production. In calculating of discrimination index (DI) for PFGE method by Simpson's index, DI was appeared as 0.917. Therefore, this index suggested that the present PFGE would seem to be a desirable and confident molecular typing method for S. pullorum strains. To our knowledge for pullorum disease, this is the first study to compare S. pullorum strains from chicken organs and feed samples using the PFGE.

Streptococcus dysgalactiae subspecies dysgalactiae와 Herpes Simplex Virus에 의한 신생아 수막염 1예 (A Case of Neonatal Meningitis Caused by Streptococcus dysgalactiae subspecies dysgalactiae and Herpes Simplex Virus)

  • 임지예;박윤선;김민성;김기환;김상용;정승연
    • Pediatric Infection and Vaccine
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    • 제26권3호
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    • pp.194-198
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    • 2019
  • Streptococcus dysgalactiae subsp. dysgalactiae (SDSD)에 의한 사람 감염병을 보고한 사례가 많지 않으며, S. dysgalactiae subsp. equisimilis (SDSE)에 의한 감염병이 대부분이다. 저자들은 생후 22일 된 신생아에서 SDSD와 단순포진 바이러스의 동시감염에 의한 수막염을 경험하였으며, 뇌경색 및 경막하삼출 등이 합병되어 총 4주간의 항균제를 투여하고 치료를 완료하였다. 본 증례의 원인 균주가 소아의 침습감염의 원인으로 알려진 바가 없으나, 오염된 동물을 통한 감염 뿐 아니라, 돌발 감염의 원인균이 될 수 있을 것으로 생각되어 1예를 보고하는 바이다.

제주도 해산 히드라충류(자포동물 문: 히드라충 강: 히드라충 목) (Marine Hydroids(Cnidaria: Hydrozoa: Hydroida) from Cheju Island, Korea)

  • 박정희
    • Animal Systematics, Evolution and Diversity
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    • 제9권2호
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    • pp.261-280
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    • 1993
  • 1993년 6월 28일부터 7월 3일 까지 문섬, 범섬 및 숲섬에서 채집된 히드라충류는 10과 25속 46종/아종으로 동정, 분류되었다. 이 중 뿌리히드라(Rhizocaulus chinenesis), 쌍뾰족혹히드라(Obelia bicuspidata), 사슬화관히드라(Sertularia desmoides), 가시깃히드라(Plumularia spinulosa)의 4종은 제주 미기록종이고, 기생털히들(Hebella parastica), 그린란드종히들 (Campanularia groelandica), 나팔종히드라(Campanularia everta), 나탈테히드라(Sertularella natalensis)의 4종은 한국미기록종으로 밝혀졌다. 문헌기록에 의하면 제주도 해산 히드라충류는 12과 41속 91종/아종이 된다. 제주해역의 우점종은 자색깃히드라(Aglaophenia suensonii)이다. 채집기별 종의 분포를 서귀포에 71종(78%)이 분포하여 가장 높은 분포를 나타냈고 그 다음이 문섬 43종(47%), 숲섬 26종(29%), 위미리 13종(14%), 범섬 11종(12%)의 순으로 나타났다. 제주해역에만 분포하는 종은 30종(33%)으로 밝혀졌다.

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제주지역 말허피스바이러스, 말인플루엔자바이러스 및 선역균에 대한 혈청학적 조사 (Seroprevalence of equine herpesvirus, equine influenza virus and Streptococcus equi subspecies equi in Jeju)

  • 하종철;양형석;고진아;박창남;김시택;이두식;손원근
    • 한국동물위생학회지
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    • 제43권2호
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    • pp.59-65
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    • 2020
  • The aim of the study was to investigate the seroprevalence of equine herpesvirus type 1 (EHV-1) and type 4 (EHV-4), equine influenza virus (EIV), and Streptococcus (S.) equi subspecies equi in the horse population of Jeju. Serum samples were taken from 71 horses, regularly vaccinated with EHV-1 and strangles twice (April and November) a year. In April 2014, seropositive rates of EHV-1 and strangles were 24.5% and 84.5%, while in November, were 26.8% and 62.0%, respectively. A total of 1,144 serum samples, including Jeju native horses, Halla horses, and Thoroughbred horses were collected from slaughter house for 4 years (2014 to 2017) and it is unclear the animals were vaccinated or not. The seropositive rates in Jeju was 21.9% (250/l,144) for EHV-1, 96.4% (1,103/1,144) for EHV-4, 14.6% (129/882) for EIV, and 79.3% (879/1,108) for strangles. The seropositive rate was the highest in Thoroughbred, but lowest in Hala horse.

ISSR 표지에 의한 연속 (Nelumbo)의 유연관계 분석 (Genetic Relationship Analysis of genus Nelumbo Accessions Based on Inter-Simple Sequence Repeats (ISSR))

  • 류재혁;최갑림;류재일;이성춘;천종은;신동영;배창휴
    • 한국약용작물학회지
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    • 제18권2호
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    • pp.86-92
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    • 2010
  • The polymorphism and the genetic relationships among 32 genetic resources of genus Nelumbo from Korea, Japan, China, USA, India, Thailand and Gabong were thoroughly investigated and extensively examined using ISSR markers. Out of 103 loci detected overall, 94 were identified to be polymorphic with a rate of 91.2%. The genetic similarity matrix revealed a wide range of variability among the 32 accessions, spanning from 0.227 to 0.833. The study findings indicate that the Nelumbo accessions have a high genetic diversity, and accordingly carry a germplasm qualifying as good genetic resources for cross breeding. According to the clustering analysis, different subspecies, N. nucifera and N. lutea, were divided into independent groups and all of the N. nucifera accessions could be classified into five categories. Compared to RAPD analysis, ISSR method showed a clearer picture of polymorphism among the accessions and exhibited a definite distinction even among the subspecies. In this respect, ISSR analysis is considered to be more effective in differentiating the accessions and subspecies of the genus Nelumbo than RAPD test.

Molecular subtyping and antimicrobial susceptibility of Streptococcus dysgalactiae subspecies equisimilis isolates from clinically diseased pigs

  • Oh, Sang-Ik;Kim, Jong Wan;Kim, Jongho;So, Byungjae;Kim, Bumseok;Kim, Ha-Young
    • Journal of Veterinary Science
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    • 제21권4호
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    • pp.57.1-57.11
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    • 2020
  • Background: Streptococcus dysgalactiae subspecies equisimilis (SDSE) acts as an etiological agent for lameness, neurological signs, and high mortality in pigs. Despite its importance in pig industries and zoonotic potential, little is known about the effects of this pathogen. Objectives: This study aimed to determine the molecular characteristics and antimicrobial resistance of SDSE strains isolated from diseased pigs. Methods: A total 11 SDSE isolates were obtained from diseased pigs. Bacterial identification, PCR for virulence genes, emm typing, and antimicrobial resistance genes, multilocus sequence typing, and antimicrobial susceptibility test were performed. Results: Nine isolates were from piglets, and 8 showed lameness, sudden death, or neurological signs. The isolates were PCR-positive for sla (100%), sagA (100%), and scpA (45.5%), and only 1 isolate amplified the emm gene (stL2764). Eight different sequence types were detected, categorized into 2 clonal complexes and 4 singletons. All the isolates in this study were included in a small cluster, which also contained other strains derived from humans and horses. The minimum inhibitory concentrations for the tested beta-lactams were low, while those for macrolides, tetracyclines, and fluoroquinolones were relatively high. PCR analysis of the macrolide and tetracycline resistance genes demonstrated that the isolates carried erm(B) (18.2%, n = 2), mef(A/E) (9.1%, n = 1), tet(M) (18.2%, n = 2), and tet(O) (90.2%, n = 10). Two isolates presented a mutation in parC, which is associated with fluoroquinolone resistance. Conclusion: This study provided insight into swine-derived SDSE, as it is related to veterinary medicine, and elucidated its zoonotic potential, in the context of molecular epidemiology and antimicrobial resistance in public health.

난대 기후대의 상록활엽수림 복원 모형(III) - 남, 동해 몇몇 도서의 관속식물상 - (Restoration Model of Evergreen Broad-leaved Forest in Warm Temperate Region(III) -Flora of Several Islands Off the South & East Seashore, Korea -)

  • 김용식;오구균
    • 한국환경생태학회지
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    • 제11권1호
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    • pp.61-83
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    • 1997
  • 1995년 8월부터 10월까지 동남해 도서지방 난대상록수림 지역인 목도, 미조리, 미조도, 까막섬, 애도, 사양도, 외나로도, 금오도, 주도, 미라리, 맹선리, 예송리 지역의 관속식물상을 조사한 바 105과 297속 380종 49변종 1아종 및 4품종 등 총 434종류(taxa)로 조사되었다. 이 중에서 목도에는 32과 53속 50종 6변종 등 총 56종류(taxa), 미조리에는 47과 80속 81변종 및 2품종 등 총 92종류(taxa), 미조도에는 47과 65속 58종 9변종 1품종등 총 68종류(taxa), 까막섬에는 39과 52속 53종 4변종 등 총 57종류(taxa), 애도는 59과 105속 112종 11변종 1아종 등 총 124종류(taxa), 사양도에는 46과 75속 83종 7변종 등 총 90종류(taxa), 외나로도에는 63과 111속 119종 13변종 1아종 및 2품종 등 총 135종류(taxa), 금오도에는 68과 132속 147종 13변종 등 총 160종류(taxa), 주도에는 40과 67속 69종 9변종 등 총 78종류(taxa), 미라리에는 67과 113속 120종 20변종 및 2품종 등 총 142종류(taxa), 맹선리에는 73과 150속 160종 24변종 및 1아종 등 총 184종류(taxa), 예송리에는 79과 156속 172종 24변종 1아종 및 1품종 등 총 196종류(taxa)로 각각 조사되었다. 이들 지역은 상록활엽수림으로 대부분이 천연기념물로 지정되어 있음에도 관리가 매우 미흡하며 지역주민들의 낮은 의식수준으로 계속적인 피해가 우려되는 바, 이들 식물은 종 및 서식처 수준에서의 적극적인 보전대책이 필요하다.

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머리뼈 형태학적 특성을 이용한 한국산 노루의 분류학적 고찰 (Taxonomic Revision of Variation in Skull Morphology of Siberian Roe Deer (Capreolus pygargus, Pallas, 1771) in South Korea)

  • 박용수;차진열;김남신
    • 한국환경생태학회지
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    • 제30권1호
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    • pp.39-47
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    • 2016
  • 한반도에 서식하는 노루의 계통분류학적 위치는 아직까지 명확하게 정리되어 있지 않으며, 최근까지 내륙과 제주도 지역에 서식하는 노루 간 외부형태와 유전학적 차이가 있다고 여러 차례 보고되고 있다. 따라서 본 연구는 외부형태와 유전적으로 차이가 나타나 두 아종으로 여겨지는 내륙과 제주도 노루의 머리뼈 특성에 있어서도 차이가 있을 것으로 생각하고, 그 차이를 비교 분석하여 한국노루의 분류학적 위치를 좀 더 명확하게 규명하고자 실시하였다. 총 50개체의 성체 노루 머리뼈를 비교 분석한 결과 머리뼈최대길이, 뒤통수뼈관절융기-치조점사이길이, 머리뼈바닥길이, 머리뼈최대폭, 광대뼈사이폭, 눈확사이폭, 얼굴길이, 위어금니열길이 등에서 유의한 차이가 나타나 제주노루가 내륙노루 보다 머리뼈의 크기 및 형태가 작은 것으로 나타났다. 두개골의 형태는 노루 아종 간 차이를 결정하는 중요한 요소이며, 위도, 경도, 고도에 직접적인 영향을 받지는 않지만 이 요소들이 1차 생산자에 영향을 미쳐 먹이식물에 변화를 가져오고 노루의 먹이 선택과 연관되어 순차적으로 두개골 형태에도 영향을 미친다. 따라서 한반도에 서식하는 노루 두개골의 계량형태학적 특성을 비교 분석한 결과 내륙 노루는 아종인 C. p. tianschanicus와 비슷한 반면, 제주 노루는 시베리아노루 3아종 및 유럽노루와 확연한 차이를 나타냈다. 이상의 결과를 종합해 볼 때 제주도 지역에 서식하는 노루의 경우 제주도에만 서식하는 고유종으로 아종 수준의 분류가 가능할 것으로 생각한다.

Lack of genetic divergence between Mogera wogura coreana from Korea and M. w. robusta from Northeastern China and adjacent Russia (Soricomorpha: Mammalia), reexamined from 12S rRNA and cytochrome b sequences

  • Koh, Hung Sun;Jang, Kyung Hee;Han, Eui Dong;Jo, Jae Eun;Jeong, Seon Ki;Ham, Eui Jeong;Lee, Jong Hyek;Kim, Kwang Seon;In, Seong Teek;Kweon, Gu Hee
    • Animal cells and systems
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    • 제16권5호
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    • pp.408-414
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    • 2012
  • To reexamine taxonomic status of endemic Mogera wogura coreana from Korea, we first obtained partial 12S rRNA sequences (893 bp) and complete cytochrome b gene sequences (1140 bp) of this subspecies, and these sequences and partial cytochrome b sequences (402 bp) were compared to the corresponding haplotypes of M. wogura from East Asia, obtained from GenBank. The one of three 12S rRNA haplotypes in M. w. coreana was identical to one 12S rRNA haplotype of M. w. robusta from East Asia: 10 complete and 13 partial cytochrome b haplotypes of M. w. coreana formed a single clade with one complete and four partial cytochrome b haplotypes of M. w. robusta, respectively. We considered that M. w. coreana from Korea is an endemic subspecies with only morphological differences, although it is necessary to reexamine the subspecies status of M. w. coreana. Additionally, in the 12S rRNA and complete cytochrome b sequences, M. wogura from Japan was distinct from the two continental subspecies of M. w. coreana and M. w. robusta with average distances of 1.76 and 5.65%, respectively; insular M. wogura, with within-group distances of 2.09 and 4.38%, respectively, was also genetically more divergent than the mainland M. wogura, with within-group distances of 0.08 and 0.57%, respectively. Thus, we considered that insular M. wogura of Japan dispersed into neighboring East Asian continent, which is opposite to the traditional hypothesis on the origin of Japanese M. wogura.