• Title/Summary/Keyword: small organisms

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Fatal cryptosporidiosis in a calf (송아지에서 발생한 중증 크립토스포리듐 증 증례)

  • Baek, Kang-Hyun;Lee, Hyun-Kyoung;Lee, Kyung-Hyun;Kim, Ha-Young;Park, Jung-Won;Lee, Bo-Ram;Her, Ji-Woong;Lee, Myoung-Heon;Bae, You-Chan
    • Korean Journal of Veterinary Research
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    • v.54 no.4
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    • pp.257-260
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    • 2014
  • A calf suffering from diarrhea was admitted to the Animal and Plant Quarantine Agency for diagnostic evaluation. Postmortem examination revealed that the mesenteric lymph node was enlarged and small intestine wall was thin. Microscopically, a large number of small round organisms were attached to the small intestine villi. Villous atrophy and proprial neutrophil infiltration were also observed. Based on modified Ziehl-Neelsen staining, electron microscopy, and ELISA results, the calf was diagnosed with fatal cryptosporidiosis.

Feeding Habit of Gobiobotia brevibarba (Cyprinidae) from the Hongcheon River, Korea (홍천강에 서식하는 돌상어 (Gobiobotia brevibarba)의 식성)

  • Choi, Jae-Suk;Kwon, Oh-Kil;Park, Jung-Ho;Byeon, Hwa-Kun
    • Korean Journal of Ichthyology
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    • v.13 no.4
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    • pp.230-236
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    • 2001
  • Feeding habits of Gobiobotia brevibarba were investigated at Hongcheon River of Bangokri, Seomyon, Hongcheongun, Kangwondo from January to December, 2000. G. brevibarba was a carnivore and consumed mainly Ephemeroptera, Tricoptera and Diptera. Small quantities of Plecoptera and Coleoptera were included as a minor food items. The species showed ontogenetic changes in feeding habits. Individuals of small size (21~50 mm SL) fed mainly on small prey organisms such as Diptera and Ephemeroptera. However, larger Tricoptera were heavily selected with increasing fish size. The relative proportion of these food items changed with season. The prey selection indices for Ephemeroptera were positively selected in spring, summer and autumn, and negatively selected in winter, Diptera were positively selected in March, October and November.

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Feeding Habits of Blotched Eelpout, Zoarces gilli Collected in the Coastal Water off Gadeok-do, Korea (한국 남해 가덕도 주변에서 채집된 등가시치 (Zoarces gilli)의 식성)

  • Huh, Sung-Hoi;Baeck, Gun-Wook
    • Korean Journal of Ichthyology
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    • v.12 no.1
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    • pp.54-61
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    • 2000
  • Feeding habits of Zoarces gilli collected in the coastal water off Gadeok-do, Korea from March 1998 to February 1999 were studied. Z. gilli was a carnivore and consumed mainly shrimps, gammarid amphipods, fishes, bivalves and cumaceans. Its diets also included small quantities of copepods, caprellid amphipods, ostracods, crabs, squids, gastropods, ophiuroids and polychaetes. It showed ontogenetic changes in feeding habits. Individuals of small size (10~15 cmSL) fed mainly on small prey organisms such as gammarid amphipods, bivalves, cumaceans and ostracods. However, larger shrimps and fishes were heavily selected with increasing fish size.

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Non-coding RNAs Associated with Biotic and Abiotic Stresses in Plants

  • Kang, Han-Chul;Yoon, Sang-Hong;Lee, Chang-Muk;Koo, Bon-Sung
    • Journal of Applied Biological Chemistry
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    • v.55 no.2
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    • pp.71-77
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    • 2012
  • Many of biochemical or physiological processes can be regulated by non-coding RNAs as well as coding RNAs in plants, animals and microbes. Recently, many small RNAs including microRNAs (miRNAs) and endogenous small interference RNAs (siRNAs) and long non-coding RNAs have been discovered from ubiquitous organisms including plants. Biotic and abiotic stresses are main causal agents of crop losses all over the world. Much efforts have been performed for understanding the complex mechanism of stress responses. Up to date, many of these researches have been related with the identification and investigation of stress-related proteins, showing limitation to resolve the complex mechanism. Recently, non-coding RNAs as well as coding genes have been gradually interested because of its potential roles in plant stress responses as well as other biophysical aspects. In this review, various potential roles of non-coding RNAs, especially miRNAs and siRNAs, are reviewed in relation with plant biotic and abiotic stresses.

A Study on Airborne Microorganism in Hospital (일부 병원 실내에서의 공기중 미생물 오염에 관한 연구)

  • Jung, Sun Hoi;Paik, Nam Won
    • Journal of Korean Society of Occupational and Environmental Hygiene
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    • v.8 no.2
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    • pp.231-241
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    • 1998
  • To assess biological indoor air quality in hospital, concentrations of viable airborne microbes were determined at intensive care unit(ICU), patient room (PR), outpatient waiting room(OPWR) in hospitals of large(1000 beds), middle(500 beds), small(100 beds) hospitals, respectively. Gram positive bacteria, gram negative bacteria, fungi were sampled using suctional sampling method by RCS sampler (Reuter centrifugal air sampler) and RCS GK-A agar plate. In gram positive bacteria groups, CNS(Coagulase Negative Staphylococcus), Micrococcus, Lactobacillus, S. aureus, Enterococcus, St. viridans identified. In gram negative bacteria groups, A. baumannii, Kl. peumoniae and E. coli were identified, and Penicillium was identified in fugi groups. Results of the study were as follows. 1. The highest concentrations of airborne microbes was $971CFU/m^3$ at 5:00 PM in small hospital patient room, and average concentrations of airborne microbes in large, middle and small hospitals were $282CFU/m^3$, $289CFU/m^3$ and $625CFU/m^3$, respectively. Average concentrations of airborne microbes in office(control) was $90CFU/m^3$. Thus, the small hospital showed the worst condition. 2. Representatives of 8 different genera were identified in 150 samples. The most frequently isolated organisms were Staphylococcus (73.0%), Micrococcus (20.7%) and Lactobacillus (4.7%), respectively. Pathogenic microbes isolated were A. baumannii, E. coli, Enterococcus, Kl. peumoniae, S. aureus, St. viridans and Penicillium as fungi. In office, no pathogenic microbes were identified. Average concentrations of airborne pathogenic microbes in large, middle and small hospital were $5CFU/m^3$ (2%), $11CFU/m^3$ (4%) and $12CFU/m^3$ (2%), respectively. Thus, condition in a large hospital was better than those in a middle and a small hospital.

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Combination Culture of Rotifer Brachionus rotundiformis and Copepod Apocylops sp. (로티퍼 Brachionus rotundiformis와 코페포다 Apocyclops sp.의 혼합 배양)

  • Jung, Min-Min;Rho, Sum
    • Journal of Aquaculture
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    • v.11 no.4
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    • pp.449-455
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    • 1998
  • The small size food organism(under the size 150${\mu}m$) is needed as food for early stage of marine fish larvae of small mouse (e.g the group of grouper). This study was investigated to develop a method for copepod Apocyclops sp. culture in combination with the rotifer B. rachionus for stable culture of copepod species and harvest of various size food organisms. The culture conditions as temperature, salinity, culture volume, photo period, culture preiod and observation interval were 25${\circ}C$, 22ppt, 40ml, all dark except to observation time, 16 days and every two day during the experimental period, respectively. The Tetraselmis suecica was used as the food for the two testing orgtanisms. After every two day counting, theses two organisms were transferred to fresh culture tanks with Tetraselmis suecica of $7{\times}10^5$cells/ml. In the mixed culture of B. rotundiformis and A. sp., growth of rotifer was suppressed by mixed culture with A. sp. whereas the growth of copepod Apocyclops was promoted in the mixed culture with rotifer B. rotundiformis (the maximum density was 22 individuals/ml through the 16 culture days). Moreover, the number of copepod nauplius were promoted about 2 times in the mixed culture compared to the numbers in single species culture. With this combination culture, the havested two food organisms of variable sizes. This size variation of food organisms was useful tools for larval rearing of small mouse marine fish larvae and next step food organism size of post hatched larvae.

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Survival of Double-Microencapsulated Bifidobacterium breve in Milk in Simulated Gastric and Small Intestinal Conditions

  • Jung, Ji-Kang;Kil, Jeung-Ha;Kim, Sang-Kyo;Jeon, Jung-Tae;Park, Kun-Young
    • Preventive Nutrition and Food Science
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    • v.12 no.1
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    • pp.58-63
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    • 2007
  • Bifidobacteria are probiotic organisms that provide both flavor and health benefits when incorporated as live cultures into commercial dairy products. Because bifidobacteria are very sensitive to environmental conditions (acids, temperature, oxygen, bile salts, the presence of other cultures, etc.), their viability in human gastrointestinal tract is limited. The microencapsulation of bifidobacteria is a process to protect them against harsh environmental conditions, thereby increasing their viability while passing through human gastrointestinal tract. To confirm the survival rate of microencapsulated Bifidobacterium breve CBG-C2 in milk, their survival rate was compared with several kinds of free bifidobacteria and lactic acid bacteria in commercial yogurt products under simulated gastric and small intestinal conditions. Double-microencapsulation of the bacteria was employed to increase the survival rate during digestion. The outer layer was covered with starch and gelatin to endure gastric conditions, and the inner layer was composed of a hard oil for the upper small intestinal regions. Almost all microencapsulted bifidobacteria in the milk survived longer than the free bifidobacteria and lactic acid bacteria in the commericial yogurt products under the simulated gastric conditions. Numbers of surviving free bifidobacteria and lactic acid bacteria in the commercial products were significantly reduced, however, the viability of the microencapsulated bificobacteria in the milk remained quite stable under gastric and small intestine conditions over 3$\sim$6 hrs. Thus double-microencapsualtion of bifidobacteria in milk is a promising method for improving the survival of bifidobacteria during the digestive process.

Feeding Ecology of Luciogobius guttatus (Pisces; Gobiidae) in the Youngjong Tide Pool, Incheon, Korea (영종도 조수웅덩이에 서식하는 미끈망둑, Luciogobius guttatus(Gobiidae)의 식성)

  • Kim, Byung Gi;Kim, Ji Hye;Chung, Su Whan;Han, Kyung Nam
    • Korean Journal of Ichthyology
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    • v.26 no.3
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    • pp.202-211
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    • 2014
  • Feeding ecology of Luciogobius guttatus (Flat-head goby) populations were investigated on the Youngjong, Incheon, Korea. In total, 257 individuals ranging from 13.4 to 57.5 mm standard length SL were analyzed. L. guttatus was studied in the Tide-pool from January 2010 to December 2010 monthly. The stomach contents of L. guttatus consisted mainly of Copepods and Brachyurans. Amphipods, Anomurans, Cumaceans, Macrurans, Insects and small stones were also observed. As a result, the benthic crustaceans were important food for this species. Harpacticoid spp. (Copepods) and Hemigrapsus spp. (Brachyurans) were major prey organisms for all fish size and seasons.

First Record of Box Jellyfish, Carybdea brevipedalia (Cnidaria: Cubozoa: Carybdeidae) from Korean Coastal Waters: Morphology and Molecular Descriptions

  • Chae, Jinho;Yoon, Won-Duk;Kim, ByeongHo;Ki, Jang-Seu
    • Animal Systematics, Evolution and Diversity
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    • v.33 no.1
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    • pp.8-16
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    • 2017
  • We firstly described a box jellyfish, Carybdea brevipedalia collected from the southern coasts of Korea. It is morphologically characterized by gastric phacellae, a special digestive system of cubozoan jellyfish, and velarium, the thin muscle flap forming the opening of the subumbrellar cavity. The phacellae are linear-shaped, comprising numerous cirri branched from multiple roots. Each root also has multiple numbers of cirrus bundles. Basis of velarial cannels parts into two branches in each octant of velarium. Its geographic distributions were limited to Jeju-do and the middle-southern coasts where the organisms are seriously hazardous to bathers in summer. Numerous individuals and/or large-sized populations were observed specifically from beaches at Jeju-do, Namhae-do and a small fishing port of Namildae, while only a small amount of the individuals was observed in Gamak Bay, Jaran-Goseung Bay, and Geoje-do. We confirmed molecular identity of the Korean C. brevipedalia with comparison of nuclear ribosomal DNA sequences. Until now, Carybdea brevipedalia is the only cubozoan species reported to be distributed in Korean waters.

Estimation of micro-biota in the Upo wetland using eukaryotic barcode molecular markers

  • Park, Hyun-Chul;Bae, Chang-Hwan;Jun, Ju-Min;Kwak, Myoung-Hai
    • Journal of Ecology and Environment
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    • v.34 no.3
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    • pp.323-331
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    • 2011
  • Biodiversity and the community composition of micro-eukaryotic organisms were investigated in the Upo wetland in Korea using molecular analysis. Molecular identification was performed using cytochrome oxidase I (COI) and small subunit ribosomal DNA (SSU rDNA). The genomic DNA was isolated directly from soil samples. The COI and SSU rDNA regions were amplified using universal primers and then sequenced after cloning. In a similarity search of the obtained sequences with BLAST in the Genbank database, the closely related sequences from NCBI were used to identify the amplified sequences. A total of six eukaryotic groups (Annelida, Arthropoda, Rotifera, Chlorophyta, Bacillariophyta, and Stramenopiles) with COI and six groups (Annelida, Arthropoda, Rotifera, Alveolata, Fungi, and Apicomplexa) with SSU rDNA genes were determined in the Upo wetland. Among 38 taxa in 20 genera, which are closely related to the amplified sequences, 10 genera (50%) were newly reported in Korea and five genera (25%) were shown to be distributed in the Upo wetland. This approach is applicable to the development of an efficient method for monitoring biodiversity without traditional taxonomic processes and is expected to produce more accurate results in depositing molecular barcode data in the near future.