• Genomics & Informatics
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• v.15 no.3
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• pp.108-111
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• 2017

Recently developed computational methods allow the imputation of human leukocyte antigen (HLA) genes using intergenic single nucleotide polymorphism markers. To improve the imputation accuracy in HLA imputation, it is essential to increase the sample size and the diversity of alleles in the reference panel. Our software, MergeReference, helps achieve this goal by providing a streamlined pipeline for combining multiple reference panels into one.

• Animal Systematics, Evolution and Diversity
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• v.25 no.1
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• pp.61-64
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• 2009

A new species Diplastrella yongmeoriensis n. sp. was collected from Jejudo Island, Korea in 2008. This new species is similar to D. bistellata (Schmidt, 1862) in growth form and skeletal structure but differs in the composition and size of spicules. The genus Diplastrella is reported for the first time in Korea.

• Journal of Life Science
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• v.34 no.7
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• pp.453-464
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• 2024

The fermentation of ganjang is known to be greatly influenced by the microbial communities derived from its primary ingredients, meju and sea salt. This study investigated the effects of changes in meju size on the distribution and correlation of microbial communities in ganjang fermentation, to enhance its fermentation process. Ganjang was prepared using whole meju and meju divided into thirds, and samples were collected at 7-day intervals over a period of 28 days for microbial community analysis based on 16S rRNA gene sequencing. At the genus level, during fermentation, ganjang made with whole meju exhibited a dominance of Chromohalobacter (day 7), Pediococcus (day 14), Bacillus (day 21), and Pediococcus (day 28), whereas ganjang made with meju divided into thirds consistently showed a Pediococcus predominance over the 28 days. Beta-diversity analysis of microbial communities in ganjang with different meju sizes revealed significant separation of microbial communities at fermentation days 7 and 14 but not at days 21 and 28 across all experimental groups. The linear discriminant analysis effect size (LEfSe) was determined to identify biomarkers contributing to microbial community differences at days 7 and 14, showing that on day 7, potentially halophilic microbes such as Gammaproteobacteria, Firmicutes, Oceanospirillales, Halomonadaceae, Bacilli, and Chromohalobacter were prominent, whereas on day 14, lactic acid bacteria such as Pediococcus acidilactici, Lactobacillaceae, Pediococcus, Bacilli, Leuconostocaceae, and Weissella were predominant. Furthermore, correlation analysis of microbial communities at the genus and species levels revealed differences in correlation patterns between meju sizes, suggesting that meju size may influence microbial interactions within ganjang.

• Korean Journal of Environmental Biology
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• v.41 no.4
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• pp.557-569
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• 2023

Amphibians are the world's most threatened group of animals, with approximately 41% facing extinction. Contrary to this global trend, the number of amphibian species in Korea has increased by approximately 53.3% over the past 20 years. In particular, salamanders within the genus Hynobius showed even greater diversity, with the number increasing three-fold from two species to seven. However, morphological and ecological traits required for the clear differentiation of these animals are yet to be determined, leading to much confusion. In this study, we investigated the validity of using size traits for species identification, as this method is currently considered a rule of thumb when differentiating Geoje salamanders (Hynobius geojeensis), cryptic Uiryeong salamanders (H. perplicatus), and Korean small salamanders (H. unisacculus). Our study revealed that sex, study period, and habitat were all factors associated with significant differences in snout-vent length, head width, and body weight. Differences in these size traits were evident both between and within species. Our results show that body size traits applied in the recent classification of the three new salamander species could not be seen as a suitable criterion. Such identification methods based solely on body size not only cause great confusion in the field but will also limit future research on Korean Hynobius salamanders.

• Animal Systematics, Evolution and Diversity
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• v.14 no.1
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• pp.51-57
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• 1998

Thirty one morphometric characters of striped field mice(Apodemus agrarius) from eight localities in Korea were analyzed by multivariate methods in order to confirm taxonomic status of specimens from Wando island. Two subgroups were recognized: a small-size form from six localities (Mt. Taebaek, Mt. Weolak, Cheongju, Mt. Chiri, Kunsan, and Jin isoland) and a large-size form from Wando island and Cheju island. It is confirmed that the small-size form from six localities is A. a. coreae, as described by Thomas(1908), and that the large-size form from Cheju island is A. a. chejuensis, as named by Johnson and Jones (1955). Furthermore, it is confirmed that large-size specimens from Wando island is and Cheju island. It is confirmed that the small-size form from six localities is A. a coreae, as described by Thomas(1908), and that the large-size form from Cheju island is A. a. chejuensis, as named by Johnson and Jones(1955). Furthermore, it is confirmed that large-size specimens from Wando island is subspecies A. a. chejuensis, as suggested by koh (1989). In future, analyses with specimens from islands in southern coasts are necessary to clarify the taxonomic status of Apodemus agrarius in Korea.

• Fashion & Textile Research Journal
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• v.10 no.1
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• pp.83-91
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• 2008

This study was designed to figure out the changes in elderly women's foot size and shape by aging, to propose size specification for elderly women's shoes, and to produce regression equations using representative measurements items to estimate other measurements usually hard to get. Subjects were 118 women of 30-59 years and the 227 elderly women over 60 years. Martin's anthropometry was done on the right foot of each subject for 25 items. And 11 indirect measurement items were measured on both foot printing sole outline and picture in profile taken by digital camera. For statistical analysis on the anthropometric measurements by SPSS program, analysis of variance, post-hoc test(SNK-test), crosstabulation, multiple correlation analysis, regression analysis were performed. The results of the study are as follows. Firstly, it was found that the foot figures of elderly women over 60 years were smaller in girth and width than those of below 60 years. In addition, it was revealed that a big toe and a little toe of elderly women showed a tendency concentrating to the central axis of feet. The foot index of elderly was smaller in width and girth. Secondly, foot size distribution table of elderly group showed wider size ranges and covered smaller sizes than the below the age of 60, meaning wide variation in foot size of elderly women. Thirdly, the multiple correlation analysis showed high correlation of foot length/girth to other measurements, suggesting these two items could be used as representative items for elderly women's shoe size specification as other age groups. Regression equations were produced using foot length/girth to estimate other measurements, suggesting such items could be estimated effectively and utilized in on/off-line shoe manufacturing shop as heel to big toe length, heel to little toe length, exterior malleouls width, instep girth, ankle girth, etc. These results imply prudent features of elderly women's foot as diversity of foot shape and wide size specification range should be applied for ergonomic shoe design for them.

• Proceedings of the Korea Information Processing Society Conference
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• 2006.05a
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• pp.693-696
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• 2006

One of the most significant characteristics of JPEG 2000, the emerging still image standards, is the Region of Interest(ROI) coding. Until now, there have been many proposed ROI methods. However, all of these methods can not be applied completely in applications. In this paper, the ROI coding mechanisms in JPEG2000 is first outlined and the diversity of ROI coding methods is discussed in detail. Then a comparative selection about using a proper ROI method according to ROI applications' requirements is proposed. Finally the experimental results show that there are also several parameters that control the effectiveness of ROI coding, such as the codeblock size, ROI size, wavelet filter type, the number of wavelet decomposition levels, and ROI importance score.

• Journal of Korea Society of Digital Industry and Information Management
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• v.5 no.3
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• pp.59-67
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• 2009

This paper proposes a improved bitmap routing protocol, which finds the best energy efficient routing path by minimizing the network overheads and prolongs the overall network lifetime. Jung proposed a bitmap scheme for sensor networks. His scheme uses a bitmap table to represent the connection information between nodes. However, it has a problem that the table size is depends on the number of nodes in the sensor networks. The problem is very serious in the sensor node with a limited memory. Thereby, this paper proposes a improved bitmap routing protocol to solve the problem in Jung's scheme. Proposed protocol over the memory restricted sensor network could optimize the size of bitmap table by applying the deployed network property. Proposed protocol could be used in the diversity of sensor networks due to it has minimum memory overheads.

• Animal Systematics, Evolution and Diversity
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• v.3 no.1
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• pp.24-40
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• 1987

Striped filed mice from Jeju-Do (Apodemus agrarius chejuensis) were used for morphometric and chromosomal studies in order to compare them with striped field mice from the korean peninsula (A. Agrarius coreae). It was found that A.agrarius chejuensis and A. agrarius coreae are similar in karyotypes and it was confirmed that the former is a large-size group and the latter is a small-size group.

• Animal Systematics, Evolution and Diversity
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• v.32 no.1
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• pp.38-43
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• 2016

Dendrophyllia compressa Ogawa and Takahashi, 1995 is newly reported from Korea. The specimen was collected off Seogwipo, Jeju-do, Korea in 1969. It is described herein based on the morphological characters of the skeletal structures. Dendrophyllia compressa is characterized by its small and bushy growth form with branches, vertical growth direction, small calicular diameter, compressed calice, Pourtalès Plan with vertical septal inner edges, flat and spongy columella, exserted septal upper margins, and epitheca. Dendrophyllia compressa has been synonymized with Cladopsammia eguchii . However, the former species differs from the latter species in its growth form, growth direction, colony size, corallite size, and corallite shape.